RNA–Protein interactions for RNA: ENST00000540805.5

PROM1-220, Transcript of prominin 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PROM1, Length 3,908 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-220ENST00000540805 GAREM2Q75VX8 874 aa4.87□□□□□ -1.63
PROM1-220ENST00000540805 LHFPL3Q86UP9 236 aa4.87□□□□□ -1.63
PROM1-220ENST00000540805 KLHL36Q8N4N3 616 aa4.87□□□□□ -1.63
PROM1-220ENST00000540805 ARIH2OSQ8N7S6 290 aa4.87□□□□□ -1.63
PROM1-220ENST00000540805 GPR32P1Q8NGA4 272 aa4.87□□□□□ -1.63
PROM1-220ENST00000540805 APOBEC4Q8WW27 367 aaKnown RBP4.87□□□□□ -1.63
PROM1-220ENST00000540805 PTP4A1Q93096 173 aa4.87□□□□□ -1.63
PROM1-220ENST00000540805 TMEM19Q96HH6 336 aa4.87□□□□□ -1.63
PROM1-220ENST00000540805 SLC35G5Q96KT7 338 aa4.87□□□□□ -1.63
PROM1-220ENST00000540805 EFCAB11Q9BUY7 163 aa4.87□□□□□ -1.63
PROM1-220ENST00000540805 SAP130Q9H0E3 1048 aa4.87□□□□□ -1.63
PROM1-220ENST00000540805 METTL7AQ9H8H3 244 aa4.87□□□□□ -1.63
PROM1-220ENST00000540805 DLL4Q9NR61 685 aa4.87□□□□□ -1.63
PROM1-220ENST00000540805 GSN-AS1Q9NRJ2 163 aa4.87□□□□□ -1.63
PROM1-220ENST00000540805 STOX2Q9P2F5 926 aaPredicted RBP4.87□□□□□ -1.63
PROM1-220ENST00000540805 SUSD2Q9UGT4 822 aa4.87□□□□□ -1.63
PROM1-220ENST00000540805 GPR160Q9UJ42 338 aa4.87□□□□□ -1.63
PROM1-220ENST00000540805 PLCL2Q9UPR0 1127 aa4.87□□□□□ -1.63
PROM1-220ENST00000540805 ZFR2Q9UPR6 939 aaKnown RBP4.87□□□□□ -1.63
PROM1-220ENST00000540805 SPG11Q96JI7 2443 aa4.87□□□□□ -1.63
PROM1-220ENST00000540805 SGCEO43556 437 aa4.87□□□□□ -1.63
PROM1-220ENST00000540805 MOSPD3O75425 235 aa4.87□□□□□ -1.63
PROM1-220ENST00000540805 CLEC3AO75596 197 aa4.87□□□□□ -1.63
PROM1-220ENST00000540805 UQCRC2P22695 453 aa4.87□□□□□ -1.63
PROM1-220ENST00000540805 OPRD1P41143 372 aa4.87□□□□□ -1.63
PROM1-220ENST00000540805 GRK6P43250 576 aa4.87□□□□□ -1.63
PROM1-220ENST00000540805 PITPNBP48739 271 aa4.87□□□□□ -1.63
PROM1-220ENST00000540805 HTRA4P83105 476 aaPredicted RBP4.87□□□□□ -1.63
PROM1-220ENST00000540805 CAMK2DQ13557 499 aa4.87□□□□□ -1.63
PROM1-220ENST00000540805 PDE7AQ13946 482 aa4.87□□□□□ -1.63
PROM1-220ENST00000540805 ZNF169Q14929 603 aaPredicted RBP4.87□□□□□ -1.63
PROM1-220ENST00000540805 GRIN2CQ14957 1233 aa4.87□□□□□ -1.63
PROM1-220ENST00000540805 HBMQ6B0K9 141 aa4.87□□□□□ -1.63
PROM1-220ENST00000540805 TANGO2Q6ICL3 276 aa4.87□□□□□ -1.63
PROM1-220ENST00000540805 IL20RBQ6UXL0 311 aa4.87□□□□□ -1.63
PROM1-220ENST00000540805 FRRS1Q6ZNA5 592 aa4.87□□□□□ -1.63
PROM1-220ENST00000540805 IKBIPQ70UQ0 350 aa4.87□□□□□ -1.63
PROM1-220ENST00000540805 PRICKLE2Q7Z3G6 844 aa4.87□□□□□ -1.63
PROM1-220ENST00000540805 SLC9B2Q86UD5 537 aa4.87□□□□□ -1.63
PROM1-220ENST00000540805 FTMTQ8N4E7 242 aa4.87□□□□□ -1.63
PROM1-220ENST00000540805 SLC7A13Q8TCU3 470 aa4.87□□□□□ -1.63
PROM1-220ENST00000540805 PDXPQ96GD0 296 aa4.87□□□□□ -1.63
PROM1-220ENST00000540805 COQ10AQ96MF6 247 aa4.87□□□□□ -1.63
PROM1-220ENST00000540805 FCRL4Q96PJ5 515 aa4.87□□□□□ -1.63
PROM1-220ENST00000540805 MAP3K3Q99759 626 aa4.87□□□□□ -1.63
PROM1-220ENST00000540805 PCBD2Q9H0N5 130 aa4.87□□□□□ -1.63
PROM1-220ENST00000540805 MVB12BQ9H7P6 319 aa4.87□□□□□ -1.63
PROM1-220ENST00000540805 NANSQ9NR45 359 aa4.87□□□□□ -1.63
PROM1-220ENST00000540805 CYSLTR2Q9NS75 346 aa4.87□□□□□ -1.63
PROM1-220ENST00000540805 ASB6Q9NWX5 421 aa4.87□□□□□ -1.63
PROM1-220ENST00000540805 CBLCQ9ULV8 474 aa4.87□□□□□ -1.63
PROM1-220ENST00000540805 HEBP2Q9Y5Z4 205 aa4.87□□□□□ -1.63
PROM1-220ENST00000540805 AGAP14A8MT82 685 aa4.86□□□□□ -1.63
PROM1-220ENST00000540805 GPR171O14626 319 aa4.86□□□□□ -1.63
PROM1-220ENST00000540805 CASC3O15234 703 aaKnown RBP4.86□□□□□ -1.63
PROM1-220ENST00000540805 RGS9O75916 674 aaPredicted RBP4.86□□□□□ -1.63
PROM1-220ENST00000540805 LALBAP00709 142 aa4.86□□□□□ -1.63
PROM1-220ENST00000540805 EIF4EP06730 217 aaKnown RBP4.86□□□□□ -1.63
PROM1-220ENST00000540805 FABP1P07148 127 aa4.86□□□□□ -1.63
PROM1-220ENST00000540805 DCNP07585 359 aaKnown RBP4.86□□□□□ -1.63
PROM1-220ENST00000540805 SULT1A3P0DMM9 295 aa4.86□□□□□ -1.63
PROM1-220ENST00000540805 SULT1A4P0DMN0 295 aa4.86□□□□□ -1.63
PROM1-220ENST00000540805 OR12D1P0DN82 309 aa4.86□□□□□ -1.63
PROM1-220ENST00000540805 MMP11P24347 488 aa4.86□□□□□ -1.63
PROM1-220ENST00000540805 ITGA3P26006 1051 aa4.86□□□□□ -1.63
PROM1-220ENST00000540805 ACADLP28330 430 aa4.86□□□□□ -1.63
PROM1-220ENST00000540805 BMP8BP34820 402 aa4.86□□□□□ -1.63
PROM1-220ENST00000540805 CCR2P41597 374 aa4.86□□□□□ -1.63
PROM1-220ENST00000540805 SLC6A9P48067 706 aa4.86□□□□□ -1.63
PROM1-220ENST00000540805 PNLIPRP1P54315 467 aa4.86□□□□□ -1.63
PROM1-220ENST00000540805 HNRNPKP61978 463 aaKnown RBP eCLIP4.86□□□□□ -1.63
PROM1-220ENST00000540805 CDK5Q00535 292 aa4.86□□□□□ -1.63
PROM1-220ENST00000540805 CHAF1BQ13112 559 aa4.86□□□□□ -1.63
PROM1-220ENST00000540805 CAMK1Q14012 370 aa4.86□□□□□ -1.63
PROM1-220ENST00000540805 ZNF234Q14588 700 aa4.86□□□□□ -1.63
PROM1-220ENST00000540805 ODF4Q2M2E3 257 aa4.86□□□□□ -1.63
PROM1-220ENST00000540805 MPEG1Q2M385 716 aa4.86□□□□□ -1.63
PROM1-220ENST00000540805 AKIRIN2Q53H80 203 aa4.86□□□□□ -1.63
PROM1-220ENST00000540805 PYHIN1Q6K0P9 492 aa4.86□□□□□ -1.63
PROM1-220ENST00000540805 PODNL1Q6PEZ8 512 aa4.86□□□□□ -1.63
PROM1-220ENST00000540805 LYPD4Q6UWN0 246 aa4.86□□□□□ -1.63
PROM1-220ENST00000540805 TFAP2EQ6VUC0 442 aa4.86□□□□□ -1.63
PROM1-220ENST00000540805 ZNF783Q6ZMS7 281 aa4.86□□□□□ -1.63
PROM1-220ENST00000540805 TMEM91Q6ZNR0 172 aa4.86□□□□□ -1.63
PROM1-220ENST00000540805 NLRC3Q7RTR2 1065 aa4.86□□□□□ -1.63
PROM1-220ENST00000540805 NUP54Q7Z3B4 507 aa4.86□□□□□ -1.63
PROM1-220ENST00000540805 COMMD6Q7Z4G1 85 aa4.86□□□□□ -1.63
PROM1-220ENST00000540805 GALNTL5Q7Z4T8 443 aa4.86□□□□□ -1.63
PROM1-220ENST00000540805 BMP8AQ7Z5Y6 402 aa4.86□□□□□ -1.63
PROM1-220ENST00000540805 RBM45Q8IUH3 476 aaKnown RBP4.86□□□□□ -1.63
PROM1-220ENST00000540805 CBLN2Q8IUK8 224 aa4.86□□□□□ -1.63
PROM1-220ENST00000540805 TCEAL8Q8IYN2 117 aa4.86□□□□□ -1.63
PROM1-220ENST00000540805 TOMM5Q8N4H5 51 aa4.86□□□□□ -1.63
PROM1-220ENST00000540805 LINC00471Q8N535 108 aa4.86□□□□□ -1.63
PROM1-220ENST00000540805 OR4K5Q8NGD3 323 aa4.86□□□□□ -1.63
PROM1-220ENST00000540805 OR2T4Q8NH00 348 aa4.86□□□□□ -1.63
PROM1-220ENST00000540805 C16orf78Q8WTQ4 265 aa4.86□□□□□ -1.63
PROM1-220ENST00000540805 SNX33Q8WV41 574 aa4.86□□□□□ -1.63
PROM1-220ENST00000540805 MACROD1Q9BQ69 325 aa4.86□□□□□ -1.63
PROM1-220ENST00000540805 DEFB126Q9BYW3 111 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms