RNA–Protein interactions for RNA: ENST00000540351.1

UBC-207, Transcript of ubiquitin C, humanhuman

TSL 1 (best)

Gene UBC, Length 622 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBC-207ENST00000540351 BCAS1O75363 584 aaPredicted RBP11.16□□□□□ -0.62
UBC-207ENST00000540351 RSL1D1O76021 490 aaKnown RBP11.16□□□□□ -0.62
UBC-207ENST00000540351 IGLV1-44P01699 117 aa11.16□□□□□ -0.62
UBC-207ENST00000540351 HMGN2P05204 90 aaKnown RBP11.16□□□□□ -0.62
UBC-207ENST00000540351 ALOX5P09917 674 aa11.16□□□□□ -0.62
UBC-207ENST00000540351 OR4A8P0C604 315 aa11.16□□□□□ -0.62
UBC-207ENST00000540351 HPGDP15428 266 aa11.16□□□□□ -0.62
UBC-207ENST00000540351 PRPH2P23942 346 aa11.16□□□□□ -0.62
UBC-207ENST00000540351 CALCRP30988 508 aa11.16□□□□□ -0.62
UBC-207ENST00000540351 PRKAA2P54646 552 aa11.16□□□□□ -0.62
UBC-207ENST00000540351 SESN3P58005 492 aa11.16□□□□□ -0.62
UBC-207ENST00000540351 LCP2Q13094 533 aa11.16□□□□□ -0.62
UBC-207ENST00000540351 MLC1Q15049 377 aa11.16□□□□□ -0.62
UBC-207ENST00000540351 PDCD2Q16342 344 aaPredicted RBP11.16□□□□□ -0.62
UBC-207ENST00000540351 C9orf135Q5VTT2 229 aa11.16□□□□□ -0.62
UBC-207ENST00000540351 SLC46A3Q7Z3Q1 461 aa11.16□□□□□ -0.62
UBC-207ENST00000540351 CARM1Q86X55 608 aa11.16□□□□□ -0.62
UBC-207ENST00000540351 ZDHHC22Q8N966 263 aa11.16□□□□□ -0.62
UBC-207ENST00000540351 ZIC4Q8N9L1 334 aa11.16□□□□□ -0.62
UBC-207ENST00000540351 TOR1AIP2Q8NFQ8 470 aa11.16□□□□□ -0.62
UBC-207ENST00000540351 ST8SIA1Q92185 356 aa11.16□□□□□ -0.62
UBC-207ENST00000540351 CCDC106Q9BWC9 280 aa11.16□□□□□ -0.62
UBC-207ENST00000540351 GPATCH2Q9NW75 528 aa11.16□□□□□ -0.62
UBC-207ENST00000540351 FLVCR1Q9Y5Y0 555 aa11.16□□□□□ -0.62
UBC-207ENST00000540351 RYR3Q15413 4870 aa11.15□□□□□ -0.62
UBC-207ENST00000540351 B4DSR2 109 aa11.15□□□□□ -0.62
UBC-207ENST00000540351 SULT2B1O00204 365 aa11.15□□□□□ -0.62
UBC-207ENST00000540351 GPR171O14626 319 aa11.15□□□□□ -0.62
UBC-207ENST00000540351 WNT9BO14905 357 aa11.15□□□□□ -0.62
UBC-207ENST00000540351 RIPK2O43353 540 aa11.15□□□□□ -0.62
UBC-207ENST00000540351 DNPH1O43598 174 aa11.15□□□□□ -0.62
UBC-207ENST00000540351 ZNF500O60304 480 aaPredicted RBP11.15□□□□□ -0.62
UBC-207ENST00000540351 RGS9O75916 674 aaPredicted RBP11.15□□□□□ -0.62
UBC-207ENST00000540351 PMS2P2O95744 297 aa11.15□□□□□ -0.62
UBC-207ENST00000540351 NUDT14O95848 222 aa11.15□□□□□ -0.62
UBC-207ENST00000540351 SNRPAP09012 282 aaKnown RBP11.15□□□□□ -0.62
UBC-207ENST00000540351 MSMPQ1L6U9 139 aa11.15□□□□□ -0.62
UBC-207ENST00000540351 HIKESHIQ53FT3 197 aa11.15□□□□□ -0.62
UBC-207ENST00000540351 CDC73Q6P1J9 531 aa11.15□□□□□ -0.62
UBC-207ENST00000540351 MYPOPQ86VE0 399 aaPredicted RBP11.15□□□□□ -0.62
UBC-207ENST00000540351 FAM71CQ8NEG0 241 aa11.15□□□□□ -0.62
UBC-207ENST00000540351 PSMA8Q8TAA3 256 aa11.15□□□□□ -0.62
UBC-207ENST00000540351 DCAKDQ8WVC6 231 aa11.15□□□□□ -0.62
UBC-207ENST00000540351 NEU4Q8WWR8 484 aaPredicted RBP11.15□□□□□ -0.62
UBC-207ENST00000540351 KATNB1Q9BVA0 655 aa11.15□□□□□ -0.62
UBC-207ENST00000540351 RBM4Q9BWF3 364 aaKnown RBP11.15□□□□□ -0.62
UBC-207ENST00000540351 LAT2Q9GZY6 243 aa11.15□□□□□ -0.62
UBC-207ENST00000540351 HOXD1Q9GZZ0 328 aa11.15□□□□□ -0.62
UBC-207ENST00000540351 NELFAQ9H3P2 528 aa11.15□□□□□ -0.62
UBC-207ENST00000540351 PPCSQ9HAB8 311 aa11.15□□□□□ -0.62
UBC-207ENST00000540351 ACER3Q9NUN7 267 aa11.15□□□□□ -0.62
UBC-207ENST00000540351 HIF1ANQ9NWT6 349 aa11.15□□□□□ -0.62
UBC-207ENST00000540351 ARMCX1Q9P291 453 aa11.15□□□□□ -0.62
UBC-207ENST00000540351 PCDHB10Q9UN67 800 aa11.15□□□□□ -0.62
UBC-207ENST00000540351 PCDHGB1Q9Y5G3 927 aa11.15□□□□□ -0.62
UBC-207ENST00000540351 LYNX1G3V0Z9 82 aa11.14□□□□□ -0.63
UBC-207ENST00000540351 ZNF264O43296 627 aa11.14□□□□□ -0.63
UBC-207ENST00000540351 MRPL33O75394 65 aaKnown RBP11.14□□□□□ -0.63
UBC-207ENST00000540351 LYNX1P0DP58 116 aa11.14□□□□□ -0.63
UBC-207ENST00000540351 SDC1P18827 310 aa11.14□□□□□ -0.63
UBC-207ENST00000540351 EFNA1P20827 205 aaPredicted RBP11.14□□□□□ -0.63
UBC-207ENST00000540351 MPGP29372 298 aa11.14□□□□□ -0.63
UBC-207ENST00000540351 PRPS1P60891 318 aa11.14□□□□□ -0.63
UBC-207ENST00000540351 CSNK2A1P68400 391 aaPredicted RBP11.14□□□□□ -0.63
UBC-207ENST00000540351 NAAAQ02083 359 aa11.14□□□□□ -0.63
UBC-207ENST00000540351 CCNIQ14094 377 aa11.14□□□□□ -0.63
UBC-207ENST00000540351 LASP1Q14847 261 aaKnown RBP11.14□□□□□ -0.63
UBC-207ENST00000540351 SLC17A1Q14916 467 aa11.14□□□□□ -0.63
UBC-207ENST00000540351 ZNF141Q15928 474 aa11.14□□□□□ -0.63
UBC-207ENST00000540351 C3orf36Q3SXR2 165 aa11.14□□□□□ -0.63
UBC-207ENST00000540351 SPDYAQ5MJ70 313 aa11.14□□□□□ -0.63
UBC-207ENST00000540351 DCST2Q5T1A1 773 aa11.14□□□□□ -0.63
UBC-207ENST00000540351 ANKRD16Q6P6B7 361 aa11.14□□□□□ -0.63
UBC-207ENST00000540351 SPATA19Q7Z5L4 167 aa11.14□□□□□ -0.63
UBC-207ENST00000540351 LCA5Q86VQ0 697 aa11.14□□□□□ -0.63
UBC-207ENST00000540351 SVOPLQ8N434 492 aa11.14□□□□□ -0.63
UBC-207ENST00000540351 LRRC17Q8N6Y2 441 aa11.14□□□□□ -0.63
UBC-207ENST00000540351 NUP37Q8NFH4 326 aa11.14□□□□□ -0.63
UBC-207ENST00000540351 CLDND2Q8NHS1 167 aa11.14□□□□□ -0.63
UBC-207ENST00000540351 ZNF418Q8TF45 676 aaPredicted RBP11.14□□□□□ -0.63
UBC-207ENST00000540351 TMEM186Q96B77 213 aa11.14□□□□□ -0.63
UBC-207ENST00000540351 METTL2AQ96IZ6 378 aaKnown RBP11.14□□□□□ -0.63
UBC-207ENST00000540351 SLC38A2Q96QD8 506 aa11.14□□□□□ -0.63
UBC-207ENST00000540351 THUMPD3Q9BV44 507 aaKnown RBP11.14□□□□□ -0.63
UBC-207ENST00000540351 RAB1BQ9H0U4 201 aa11.14□□□□□ -0.63
UBC-207ENST00000540351 REEP4Q9H6H4 257 aa11.14□□□□□ -0.63
UBC-207ENST00000540351 ZNF442Q9H7R0 627 aa11.14□□□□□ -0.63
UBC-207ENST00000540351 G6PC2Q9NQR9 355 aa11.14□□□□□ -0.63
UBC-207ENST00000540351 TRIM49D1C9J1S8 452 aa11.13□□□□□ -0.63
UBC-207ENST00000540351 TRIM77I1YAP6 450 aa11.13□□□□□ -0.63
UBC-207ENST00000540351 KLF11O14901 512 aa11.13□□□□□ -0.63
UBC-207ENST00000540351 CECR9P0C854 216 aa11.13□□□□□ -0.63
UBC-207ENST00000540351 UBL4AP11441 157 aa11.13□□□□□ -0.63
UBC-207ENST00000540351 PCMT1P22061 227 aa11.13□□□□□ -0.63
UBC-207ENST00000540351 ATP5F1P24539 256 aaPredicted RBP11.13□□□□□ -0.63
UBC-207ENST00000540351 LIMS1P48059 325 aa11.13□□□□□ -0.63
UBC-207ENST00000540351 LMO4P61968 165 aa11.13□□□□□ -0.63
UBC-207ENST00000540351 POU3F1Q03052 451 aaPredicted RBP11.13□□□□□ -0.63
UBC-207ENST00000540351 CBFBQ13951 182 aa11.13□□□□□ -0.63
UBC-207ENST00000540351 ELFN2Q5R3F8 820 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms