RNA–Protein interactions for RNA: ENST00000539847.1

CCDC60-204, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CCDC60, Length 581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-204ENST00000539847 ZNF843Q8N446 348 aa7.09□□□□□ -1.27
CCDC60-204ENST00000539847 SYT14Q8NB59 555 aa7.09□□□□□ -1.27
CCDC60-204ENST00000539847 FAM98AQ8NCA5 519 aaKnown RBP7.09□□□□□ -1.27
CCDC60-204ENST00000539847 MORN4Q8NDC4 146 aa7.09□□□□□ -1.27
CCDC60-204ENST00000539847 OR11H7Q8NGC8 314 aa7.09□□□□□ -1.27
CCDC60-204ENST00000539847 OR4K5Q8NGD3 323 aa7.09□□□□□ -1.27
CCDC60-204ENST00000539847 OR4K1Q8NGD4 311 aa7.09□□□□□ -1.27
CCDC60-204ENST00000539847 OR2AP1Q8NGE2 309 aa7.09□□□□□ -1.27
CCDC60-204ENST00000539847 OR5T2Q8NGG2 359 aa7.09□□□□□ -1.27
CCDC60-204ENST00000539847 FIBINQ8TAL6 211 aa7.09□□□□□ -1.27
CCDC60-204ENST00000539847 TEX47Q8TBZ9 253 aa7.09□□□□□ -1.27
CCDC60-204ENST00000539847 HAVCR2Q8TDQ0 301 aa7.09□□□□□ -1.27
CCDC60-204ENST00000539847 C15orf40Q8WUR7 153 aa7.09□□□□□ -1.27
CCDC60-204ENST00000539847 SORCS1Q8WY21 1168 aa7.09□□□□□ -1.27
CCDC60-204ENST00000539847 TMEM203Q969S6 136 aa7.09□□□□□ -1.27
CCDC60-204ENST00000539847 FAM131CQ96AQ9 280 aa7.09□□□□□ -1.27
CCDC60-204ENST00000539847 PRRC1Q96M27 445 aa7.09□□□□□ -1.27
CCDC60-204ENST00000539847 KLHL15Q96M94 604 aa7.09□□□□□ -1.27
CCDC60-204ENST00000539847 CCDC140Q96MF4 163 aa7.09□□□□□ -1.27
CCDC60-204ENST00000539847 RBP7Q96R05 134 aa7.09□□□□□ -1.27
CCDC60-204ENST00000539847 PKP4Q99569 1192 aa7.09□□□□□ -1.27
CCDC60-204ENST00000539847 UTP23Q9BRU9 249 aaKnown RBP7.09□□□□□ -1.27
CCDC60-204ENST00000539847 WACQ9BTA9 647 aa7.09□□□□□ -1.27
CCDC60-204ENST00000539847 FNDC11Q9BVV2 318 aa7.09□□□□□ -1.27
CCDC60-204ENST00000539847 CACNG6Q9BXT2 260 aa7.09□□□□□ -1.27
CCDC60-204ENST00000539847 B3GNT4Q9C0J1 378 aa7.09□□□□□ -1.27
CCDC60-204ENST00000539847 ATG10Q9H0Y0 220 aa7.09□□□□□ -1.27
CCDC60-204ENST00000539847 SLC6A15Q9H2J7 730 aa7.09□□□□□ -1.27
CCDC60-204ENST00000539847 RHBGQ9H310 441 aa7.09□□□□□ -1.27
CCDC60-204ENST00000539847 LDAHQ9H6V9 325 aa7.09□□□□□ -1.27
CCDC60-204ENST00000539847 PLEKHA1Q9HB21 404 aa7.09□□□□□ -1.27
CCDC60-204ENST00000539847 GP6Q9HCN6 339 aa7.09□□□□□ -1.27
CCDC60-204ENST00000539847 DLL4Q9NR61 685 aa7.09□□□□□ -1.27
CCDC60-204ENST00000539847 ENAMQ9NRM1 1142 aa7.09□□□□□ -1.27
CCDC60-204ENST00000539847 MAN2C1Q9NTJ4 1040 aa7.09□□□□□ -1.27
CCDC60-204ENST00000539847 BABAM2Q9NXR7 383 aa7.09□□□□□ -1.27
CCDC60-204ENST00000539847 EXTL2Q9UBQ6 330 aa7.09□□□□□ -1.27
CCDC60-204ENST00000539847 CGGBP1Q9UFW8 167 aaPredicted RBP7.09□□□□□ -1.27
CCDC60-204ENST00000539847 ADAM29Q9UKF5 820 aa7.09□□□□□ -1.27
CCDC60-204ENST00000539847 POMT2Q9UKY4 750 aa7.09□□□□□ -1.27
CCDC60-204ENST00000539847 CLCA2Q9UQC9 943 aa7.09□□□□□ -1.27
CCDC60-204ENST00000539847 CAMK2AQ9UQM7 478 aa7.09□□□□□ -1.27
CCDC60-204ENST00000539847 ENTPD4Q9Y227 616 aa7.09□□□□□ -1.27
CCDC60-204ENST00000539847 SLCO1B1Q9Y6L6 691 aa7.09□□□□□ -1.27
CCDC60-204ENST00000539847 MGAQ8IWI9 3026 aa7.09□□□□□ -1.27
CCDC60-204ENST00000539847 A0A0G2JPF8 293 aa7.08□□□□□ -1.28
CCDC60-204ENST00000539847 EDDM13A0A1B0GTR0 161 aa7.08□□□□□ -1.28
CCDC60-204ENST00000539847 A0A1B0GW55 424 aa7.08□□□□□ -1.28
CCDC60-204ENST00000539847 A0A1W2PPL8 197 aa7.08□□□□□ -1.28
CCDC60-204ENST00000539847 hCG_1807616A0A1W2PRN6 198 aa7.08□□□□□ -1.28
CCDC60-204ENST00000539847 MFSD2BA6NFX1 497 aa7.08□□□□□ -1.28
CCDC60-204ENST00000539847 HMSDA8MTL9 139 aa7.08□□□□□ -1.28
CCDC60-204ENST00000539847 A8MXK9 166 aa7.08□□□□□ -1.28
CCDC60-204ENST00000539847 HNRNPCL2B2RXH8 293 aa7.08□□□□□ -1.28
CCDC60-204ENST00000539847 HNRNPCL3B7ZW38 293 aa7.08□□□□□ -1.28
CCDC60-204ENST00000539847 J3QKU1 62 aa7.08□□□□□ -1.28
CCDC60-204ENST00000539847 SULT1B1O43704 296 aa7.08□□□□□ -1.28
CCDC60-204ENST00000539847 TLX3O43711 291 aaPredicted RBP7.08□□□□□ -1.28
CCDC60-204ENST00000539847 TBL1XO60907 577 aa7.08□□□□□ -1.28
CCDC60-204ENST00000539847 RNGTTO60942 597 aaKnown RBP7.08□□□□□ -1.28
CCDC60-204ENST00000539847 SEMA7AO75326 666 aa7.08□□□□□ -1.28
CCDC60-204ENST00000539847 B3GALNT1O75752 331 aa7.08□□□□□ -1.28
CCDC60-204ENST00000539847 SC5DO75845 299 aa7.08□□□□□ -1.28
CCDC60-204ENST00000539847 UBXN7O94888 489 aa7.08□□□□□ -1.28
CCDC60-204ENST00000539847 ECDO95905 644 aaPredicted RBP7.08□□□□□ -1.28
CCDC60-204ENST00000539847 H2AFB2P0C5Z0 115 aa7.08□□□□□ -1.28
CCDC60-204ENST00000539847 DUX4L2P0CJ85 424 aa7.08□□□□□ -1.28
CCDC60-204ENST00000539847 DUX4L3P0CJ86 424 aa7.08□□□□□ -1.28
CCDC60-204ENST00000539847 DUX4L4P0CJ87 422 aa7.08□□□□□ -1.28
CCDC60-204ENST00000539847 DUX4L5P0CJ88 424 aa7.08□□□□□ -1.28
CCDC60-204ENST00000539847 DUX4L6P0CJ89 424 aa7.08□□□□□ -1.28
CCDC60-204ENST00000539847 DUX4L7P0CJ90 424 aa7.08□□□□□ -1.28
CCDC60-204ENST00000539847 HNRNPCL4P0DMR1 293 aa7.08□□□□□ -1.28
CCDC60-204ENST00000539847 SAGP10523 405 aaPredicted RBP7.08□□□□□ -1.28
CCDC60-204ENST00000539847 CPN1P15169 458 aa7.08□□□□□ -1.28
CCDC60-204ENST00000539847 NPPBP16860 134 aa7.08□□□□□ -1.28
CCDC60-204ENST00000539847 C5AR1P21730 350 aa7.08□□□□□ -1.28
CCDC60-204ENST00000539847 MAPK3P27361 379 aaPredicted RBP7.08□□□□□ -1.28
CCDC60-204ENST00000539847 ITPKBP27987 946 aa7.08□□□□□ -1.28
CCDC60-204ENST00000539847 LCN1P31025 176 aa7.08□□□□□ -1.28
CCDC60-204ENST00000539847 SSTR4P31391 388 aa7.08□□□□□ -1.28
CCDC60-204ENST00000539847 BTCP35070 178 aa7.08□□□□□ -1.28
CCDC60-204ENST00000539847 MECP2P51608 486 aaKnown RBP7.08□□□□□ -1.28
CCDC60-204ENST00000539847 NXPH1P58417 271 aa7.08□□□□□ -1.28
CCDC60-204ENST00000539847 RAP2BP61225 183 aa7.08□□□□□ -1.28
CCDC60-204ENST00000539847 ST8SIA6P61647 398 aa7.08□□□□□ -1.28
CCDC60-204ENST00000539847 CDH18Q13634 790 aa7.08□□□□□ -1.28
CCDC60-204ENST00000539847 TRAM2Q15035 370 aa7.08□□□□□ -1.28
CCDC60-204ENST00000539847 SHBQ15464 509 aa7.08□□□□□ -1.28
CCDC60-204ENST00000539847 CST6Q15828 149 aa7.08□□□□□ -1.28
CCDC60-204ENST00000539847 ZNF648Q5T619 568 aaPredicted RBP7.08□□□□□ -1.28
CCDC60-204ENST00000539847 METTL11BQ5VVY1 283 aa7.08□□□□□ -1.28
CCDC60-204ENST00000539847 RGS7BPQ6MZT1 257 aaPredicted RBP7.08□□□□□ -1.28
CCDC60-204ENST00000539847 ZNF322Q6U7Q0 402 aaPredicted RBP7.08□□□□□ -1.28
CCDC60-204ENST00000539847 IGF2-ASQ6U949 168 aa7.08□□□□□ -1.28
CCDC60-204ENST00000539847 ANGPTL8Q6UXH0 198 aa7.08□□□□□ -1.28
CCDC60-204ENST00000539847 TMIGD1Q6UXZ0 262 aa7.08□□□□□ -1.28
CCDC60-204ENST00000539847 TMEM64Q6YI46 380 aa7.08□□□□□ -1.28
CCDC60-204ENST00000539847 TMEM91Q6ZNR0 172 aa7.08□□□□□ -1.28
CCDC60-204ENST00000539847 RRM2BQ7LG56 351 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms