RNA–Protein interactions for RNA: ENST00000539589.5

PACSIN3-211, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PACSIN3, Length 2,009 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-211ENST00000539589 ZNF440Q8IYI8 595 aa18.57■□□□□ 0.56
PACSIN3-211ENST00000539589 KLHL36Q8N4N3 616 aa18.57■□□□□ 0.56
PACSIN3-211ENST00000539589 STT3BQ8TCJ2 826 aa18.57■□□□□ 0.56
PACSIN3-211ENST00000539589 OIT3Q8WWZ8 545 aa18.57■□□□□ 0.56
PACSIN3-211ENST00000539589 PMEPA1Q969W9 287 aa18.57■□□□□ 0.56
PACSIN3-211ENST00000539589 NACC2Q96BF6 587 aa18.57■□□□□ 0.56
PACSIN3-211ENST00000539589 CLIP3Q96DZ5 547 aa18.57■□□□□ 0.56
PACSIN3-211ENST00000539589 SLC46A1Q96NT5 459 aa18.57■□□□□ 0.56
PACSIN3-211ENST00000539589 PHOX2BQ99453 314 aa18.57■□□□□ 0.56
PACSIN3-211ENST00000539589 JAM3Q9BX67 310 aa18.57■□□□□ 0.56
PACSIN3-211ENST00000539589 MROQ9BYG7 248 aa18.57■□□□□ 0.56
PACSIN3-211ENST00000539589 CRNNQ9UBG3 495 aaPredicted RBP18.57■□□□□ 0.56
PACSIN3-211ENST00000539589 CLCA3PQ9Y6N3 262 aa18.57■□□□□ 0.56
PACSIN3-211ENST00000539589 IGLV3-12A0A075B6K2 115 aa18.57■□□□□ 0.56
PACSIN3-211ENST00000539589 A0A075B6Q4 140 aa18.57■□□□□ 0.56
PACSIN3-211ENST00000539589 PCNX2A6NKB5 2137 aa18.57■□□□□ 0.56
PACSIN3-211ENST00000539589 RPS19P39019 145 aaKnown RBP18.57■□□□□ 0.56
PACSIN3-211ENST00000539589 PPICP45877 212 aa18.57■□□□□ 0.56
PACSIN3-211ENST00000539589 COPZ1P61923 177 aa18.57■□□□□ 0.56
PACSIN3-211ENST00000539589 IFITM3Q01628 133 aa18.57■□□□□ 0.56
PACSIN3-211ENST00000539589 KLHL26Q53HC5 615 aa18.57■□□□□ 0.56
PACSIN3-211ENST00000539589 ARMC4Q5T2S8 1044 aa18.57■□□□□ 0.56
PACSIN3-211ENST00000539589 LSRQ86X29 649 aaPredicted RBP18.57■□□□□ 0.56
PACSIN3-211ENST00000539589 ZNF527Q8NB42 609 aa18.57■□□□□ 0.56
PACSIN3-211ENST00000539589 ZSCAN1Q8NBB4 408 aa18.57■□□□□ 0.56
PACSIN3-211ENST00000539589 ZNF485Q8NCK3 441 aa18.57■□□□□ 0.56
PACSIN3-211ENST00000539589 DNAJA4Q8WW22 397 aaPredicted RBP18.57■□□□□ 0.56
PACSIN3-211ENST00000539589 TRMT61AQ96FX7 289 aaKnown RBP18.57■□□□□ 0.56
PACSIN3-211ENST00000539589 SECISBP2Q96T21 854 aaKnown RBP18.57■□□□□ 0.56
PACSIN3-211ENST00000539589 TGIF2Q9GZN2 237 aa18.57■□□□□ 0.56
PACSIN3-211ENST00000539589 AKIRIN1Q9H9L7 192 aaPredicted RBP18.57■□□□□ 0.56
PACSIN3-211ENST00000539589 MKL2Q9ULH7 1088 aa18.57■□□□□ 0.56
PACSIN3-211ENST00000539589 RIIAD1A6NNX1 92 aa18.56■□□□□ 0.56
PACSIN3-211ENST00000539589 TNFRSF10AO00220 468 aa18.56■□□□□ 0.56
PACSIN3-211ENST00000539589 NGFRP08138 427 aa18.56■□□□□ 0.56
PACSIN3-211ENST00000539589 ZNF28P17035 718 aa18.56■□□□□ 0.56
PACSIN3-211ENST00000539589 RORCP51449 518 aa18.56■□□□□ 0.56
PACSIN3-211ENST00000539589 CRYZQ08257 329 aaKnown RBP18.56■□□□□ 0.56
PACSIN3-211ENST00000539589 NAXDQ8IW45 347 aa18.56■□□□□ 0.56
PACSIN3-211ENST00000539589 AGBL5Q8NDL9 886 aa18.56■□□□□ 0.56
PACSIN3-211ENST00000539589 OR52N1Q8NH53 320 aa18.56■□□□□ 0.56
PACSIN3-211ENST00000539589 TMEM203Q969S6 136 aa18.56■□□□□ 0.56
PACSIN3-211ENST00000539589 EFHD2Q96C19 240 aaPredicted RBP18.56■□□□□ 0.56
PACSIN3-211ENST00000539589 PPP1R14BQ96C90 147 aa18.56■□□□□ 0.56
PACSIN3-211ENST00000539589 EDEM2Q9BV94 578 aa18.56■□□□□ 0.56
PACSIN3-211ENST00000539589 UBQLN4Q9NRR5 601 aa18.56■□□□□ 0.56
PACSIN3-211ENST00000539589 TXNL4BQ9NX01 149 aaKnown RBP18.56■□□□□ 0.56
PACSIN3-211ENST00000539589 ERVK13-1Q9NX77 482 aa18.56■□□□□ 0.56
PACSIN3-211ENST00000539589 PNMA8CA0A1B0GUJ8 204 aa18.56■□□□□ 0.56
PACSIN3-211ENST00000539589 PRR23D1E9PI22 279 aaPredicted RBP18.56■□□□□ 0.56
PACSIN3-211ENST00000539589 SLC30A4O14863 429 aa18.56■□□□□ 0.56
PACSIN3-211ENST00000539589 PRKNO60260 465 aaPredicted RBP18.56■□□□□ 0.56
PACSIN3-211ENST00000539589 ONECUT2O95948 504 aa18.56■□□□□ 0.56
PACSIN3-211ENST00000539589 PRR23D2P0DMB1 279 aaPredicted RBP18.56■□□□□ 0.56
PACSIN3-211ENST00000539589 HPGDP15428 266 aa18.56■□□□□ 0.56
PACSIN3-211ENST00000539589 SLC6A6P31641 620 aa18.56■□□□□ 0.56
PACSIN3-211ENST00000539589 OXA1LQ15070 435 aa18.56■□□□□ 0.56
PACSIN3-211ENST00000539589 NSDHLQ15738 373 aa18.56■□□□□ 0.56
PACSIN3-211ENST00000539589 NDUFAF6Q330K2 333 aa18.56■□□□□ 0.56
PACSIN3-211ENST00000539589 LANCL3Q6ZV70 420 aa18.56■□□□□ 0.56
PACSIN3-211ENST00000539589 SNX29P2Q8IUI4 249 aa18.56■□□□□ 0.56
PACSIN3-211ENST00000539589 MINDY2Q8NBR6 621 aa18.56■□□□□ 0.56
PACSIN3-211ENST00000539589 PLPP5Q8NEB5 264 aa18.56■□□□□ 0.56
PACSIN3-211ENST00000539589 OR51G2Q8NGK0 314 aa18.56■□□□□ 0.56
PACSIN3-211ENST00000539589 C1GALT1C1Q96EU7 318 aa18.56■□□□□ 0.56
PACSIN3-211ENST00000539589 TNFRSF13CQ96RJ3 184 aa18.56■□□□□ 0.56
PACSIN3-211ENST00000539589 MESP1Q9BRJ9 268 aa18.56■□□□□ 0.56
PACSIN3-211ENST00000539589 OR8D2Q9GZM6 311 aa18.56■□□□□ 0.56
PACSIN3-211ENST00000539589 AKAP8O43823 692 aaKnown RBP18.55■□□□□ 0.56
PACSIN3-211ENST00000539589 IL33O95760 270 aa18.55■□□□□ 0.56
PACSIN3-211ENST00000539589 DDAH2O95865 285 aa18.55■□□□□ 0.56
PACSIN3-211ENST00000539589 GABRA5P31644 462 aa18.55■□□□□ 0.56
PACSIN3-211ENST00000539589 IL11RAQ14626 422 aa18.55■□□□□ 0.56
PACSIN3-211ENST00000539589 ELAVL1Q15717 326 aaKnown RBP18.55■□□□□ 0.56
PACSIN3-211ENST00000539589 SIRT6Q8N6T7 355 aa18.55■□□□□ 0.56
PACSIN3-211ENST00000539589 KCNS3Q9BQ31 491 aa18.55■□□□□ 0.56
PACSIN3-211ENST00000539589 ZNF649Q9BS31 505 aa18.55■□□□□ 0.56
PACSIN3-211ENST00000539589 MED20Q9H944 212 aa18.55■□□□□ 0.56
PACSIN3-211ENST00000539589 MRTO4Q9UKD2 239 aaKnown RBP18.55■□□□□ 0.56
PACSIN3-211ENST00000539589 EP300Q09472 2414 aaPredicted RBP18.55■□□□□ 0.56
PACSIN3-211ENST00000539589 A0A087WUJ7 227 aa18.54■□□□□ 0.56
PACSIN3-211ENST00000539589 SLC22A31A6NKX4 558 aa18.54■□□□□ 0.56
PACSIN3-211ENST00000539589 J3QRE1 110 aa18.54■□□□□ 0.56
PACSIN3-211ENST00000539589 IGKV3-11P04433 115 aa18.54■□□□□ 0.56
PACSIN3-211ENST00000539589 PEPDP12955 493 aa18.54■□□□□ 0.56
PACSIN3-211ENST00000539589 ZNF3P17036 446 aa18.54■□□□□ 0.56
PACSIN3-211ENST00000539589 HK1P19367 917 aa18.54■□□□□ 0.56
PACSIN3-211ENST00000539589 CD79BP40259 229 aa18.54■□□□□ 0.56
PACSIN3-211ENST00000539589 ADH7P40394 386 aa18.54■□□□□ 0.56
PACSIN3-211ENST00000539589 CLDN6P56747 220 aa18.54■□□□□ 0.56
PACSIN3-211ENST00000539589 DCDP81605 110 aaKnown RBP18.54■□□□□ 0.56
PACSIN3-211ENST00000539589 MC2RQ01718 297 aa18.54■□□□□ 0.56
PACSIN3-211ENST00000539589 ACSM1Q08AH1 577 aa18.54■□□□□ 0.56
PACSIN3-211ENST00000539589 TCF15Q12870 199 aa18.54■□□□□ 0.56
PACSIN3-211ENST00000539589 ACBD7Q8N6N7 88 aa18.54■□□□□ 0.56
PACSIN3-211ENST00000539589 SLC37A3Q8NCC5 494 aa18.54■□□□□ 0.56
PACSIN3-211ENST00000539589 SLC2A12Q8TD20 617 aa18.54■□□□□ 0.56
PACSIN3-211ENST00000539589 ZNF721Q8TF20 911 aa18.54■□□□□ 0.56
PACSIN3-211ENST00000539589 LMF1Q96S06 567 aa18.54■□□□□ 0.56
PACSIN3-211ENST00000539589 SNTG1Q9NSN8 517 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms