RNA–Protein interactions for RNA: ENST00000539533.3

PCDHB17P-201, Transcript of protocadherin beta 17 pseudogene, humanhuman

BASIC

Gene PCDHB17P, Length 2,393 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB17P-201ENST00000539533 SLC25A46Q96AG3 418 aa15.71■□□□□ 0.11
PCDHB17P-201ENST00000539533 RNF170Q96K19 258 aa15.71■□□□□ 0.11
PCDHB17P-201ENST00000539533 NUDT9Q9BW91 350 aa15.71■□□□□ 0.11
PCDHB17P-201ENST00000539533 TSSK6Q9BXA6 273 aa15.71■□□□□ 0.11
PCDHB17P-201ENST00000539533 TGIF2Q9GZN2 237 aa15.71■□□□□ 0.11
PCDHB17P-201ENST00000539533 AKIRIN1Q9H9L7 192 aaPredicted RBP15.71■□□□□ 0.11
PCDHB17P-201ENST00000539533 RXFP3Q9NSD7 469 aa15.71■□□□□ 0.11
PCDHB17P-201ENST00000539533 MGAT4BQ9UQ53 548 aa15.71■□□□□ 0.11
PCDHB17P-201ENST00000539533 KMT2EQ8IZD2 1858 aa15.7■□□□□ 0.1
PCDHB17P-201ENST00000539533 CDRT1O95170 752 aa15.7■□□□□ 0.1
PCDHB17P-201ENST00000539533 CCL4P13236 92 aa15.7■□□□□ 0.1
PCDHB17P-201ENST00000539533 ACP1P24666 158 aa15.7■□□□□ 0.1
PCDHB17P-201ENST00000539533 RORAP35398 523 aa15.7■□□□□ 0.1
PCDHB17P-201ENST00000539533 DCDP81605 110 aaKnown RBP15.7■□□□□ 0.1
PCDHB17P-201ENST00000539533 C1DQ13901 141 aaKnown RBP15.7■□□□□ 0.1
PCDHB17P-201ENST00000539533 ZNF385CQ66K41 422 aaPredicted RBP15.7■□□□□ 0.1
PCDHB17P-201ENST00000539533 BCDIN3DQ7Z5W3 292 aaKnown RBP15.7■□□□□ 0.1
PCDHB17P-201ENST00000539533 MORN4Q8NDC4 146 aa15.7■□□□□ 0.1
PCDHB17P-201ENST00000539533 PLPP5Q8NEB5 264 aa15.7■□□□□ 0.1
PCDHB17P-201ENST00000539533 OR4K5Q8NGD3 323 aa15.7■□□□□ 0.1
PCDHB17P-201ENST00000539533 ABCB9Q9NP78 766 aa15.7■□□□□ 0.1
PCDHB17P-201ENST00000539533 RALGAPA1Q6GYQ0 2036 aa15.7■□□□□ 0.1
PCDHB17P-201ENST00000539533 IGLV3-12A0A075B6K2 115 aa15.7■□□□□ 0.1
PCDHB17P-201ENST00000539533 CCDC182A6NF36 153 aa15.7■□□□□ 0.1
PCDHB17P-201ENST00000539533 MYL12BO14950 172 aa15.7■□□□□ 0.1
PCDHB17P-201ENST00000539533 C19orf57Q0VDD7 668 aa15.7■□□□□ 0.1
PCDHB17P-201ENST00000539533 TARDBPQ13148 414 aaKnown RBP eCLIP15.7■□□□□ 0.1
PCDHB17P-201ENST00000539533 RNLSQ5VYX0 342 aa15.7■□□□□ 0.1
PCDHB17P-201ENST00000539533 PLEKHM3Q6ZWE6 761 aa15.7■□□□□ 0.1
PCDHB17P-201ENST00000539533 ZER1Q7Z7L7 766 aa15.7■□□□□ 0.1
PCDHB17P-201ENST00000539533 ELMOD2Q8IZ81 293 aa15.7■□□□□ 0.1
PCDHB17P-201ENST00000539533 BMPERQ8N8U9 685 aa15.7■□□□□ 0.1
PCDHB17P-201ENST00000539533 OR8J1Q8NGP2 316 aa15.7■□□□□ 0.1
PCDHB17P-201ENST00000539533 ANGPTL6Q8NI99 470 aa15.7■□□□□ 0.1
PCDHB17P-201ENST00000539533 SLC7A6Q92536 515 aa15.7■□□□□ 0.1
PCDHB17P-201ENST00000539533 PMM1Q92871 262 aa15.7■□□□□ 0.1
PCDHB17P-201ENST00000539533 CITED4Q96RK1 184 aa15.7■□□□□ 0.1
PCDHB17P-201ENST00000539533 MIXL1Q9H2W2 232 aa15.7■□□□□ 0.1
PCDHB17P-201ENST00000539533 RANGRFQ9HD47 186 aaPredicted RBP15.7■□□□□ 0.1
PCDHB17P-201ENST00000539533 A0A087WUU8 490 aa15.69■□□□□ 0.1
PCDHB17P-201ENST00000539533 IGHV3-20A0A0C4DH32 117 aa15.69■□□□□ 0.1
PCDHB17P-201ENST00000539533 CDX4O14627 284 aaPredicted RBP15.69■□□□□ 0.1
PCDHB17P-201ENST00000539533 PLD2O14939 933 aa15.69■□□□□ 0.1
PCDHB17P-201ENST00000539533 POLR1CO15160 346 aaPredicted RBP15.69■□□□□ 0.1
PCDHB17P-201ENST00000539533 FLRT2O43155 660 aa15.69■□□□□ 0.1
PCDHB17P-201ENST00000539533 GALR2O43603 387 aaPredicted RBP15.69■□□□□ 0.1
PCDHB17P-201ENST00000539533 XKRXQ6PP77 449 aa15.69■□□□□ 0.1
PCDHB17P-201ENST00000539533 MEX3DQ86XN8 651 aaKnown RBP15.69■□□□□ 0.1
PCDHB17P-201ENST00000539533 NKAIN4Q8IVV8 208 aa15.69■□□□□ 0.1
PCDHB17P-201ENST00000539533 SLC38A6Q8IZM9 456 aa15.69■□□□□ 0.1
PCDHB17P-201ENST00000539533 TCEANCQ8N8B7 351 aa15.69■□□□□ 0.1
PCDHB17P-201ENST00000539533 AGBL5Q8NDL9 886 aa15.69■□□□□ 0.1
PCDHB17P-201ENST00000539533 CNOT9Q92600 299 aaKnown RBP15.69■□□□□ 0.1
PCDHB17P-201ENST00000539533 SLC46A1Q96NT5 459 aa15.69■□□□□ 0.1
PCDHB17P-201ENST00000539533 FYTTD1Q96QD9 318 aaKnown RBP15.69■□□□□ 0.1
PCDHB17P-201ENST00000539533 NXF5Q9H1B4 397 aaKnown RBP15.69■□□□□ 0.1
PCDHB17P-201ENST00000539533 TXNL4BQ9NX01 149 aaKnown RBP15.69■□□□□ 0.1
PCDHB17P-201ENST00000539533 IL1AP01583 271 aa15.69■□□□□ 0.1
PCDHB17P-201ENST00000539533 GP1BAP07359 652 aa15.69■□□□□ 0.1
PCDHB17P-201ENST00000539533 CSF3P09919 207 aa15.69■□□□□ 0.1
PCDHB17P-201ENST00000539533 FGF5P12034 268 aa15.69■□□□□ 0.1
PCDHB17P-201ENST00000539533 ZNF28P17035 718 aa15.69■□□□□ 0.1
PCDHB17P-201ENST00000539533 HTR2BP41595 481 aa15.69■□□□□ 0.1
PCDHB17P-201ENST00000539533 ST3GAL3Q11203 375 aa15.69■□□□□ 0.1
PCDHB17P-201ENST00000539533 HNRNPA0Q13151 305 aaKnown RBP15.69■□□□□ 0.1
PCDHB17P-201ENST00000539533 TRA2AQ13595 282 aaKnown RBP eCLIP15.69■□□□□ 0.1
PCDHB17P-201ENST00000539533 CCDC157Q569K6 752 aa15.69■□□□□ 0.1
PCDHB17P-201ENST00000539533 GDF7Q7Z4P5 450 aa15.69■□□□□ 0.1
PCDHB17P-201ENST00000539533 OR4C3Q8NH37 302 aa15.69■□□□□ 0.1
PCDHB17P-201ENST00000539533 DAZLQ92904 295 aaKnown RBP15.69■□□□□ 0.1
PCDHB17P-201ENST00000539533 PMEPA1Q969W9 287 aa15.69■□□□□ 0.1
PCDHB17P-201ENST00000539533 GPA33Q99795 319 aa15.69■□□□□ 0.1
PCDHB17P-201ENST00000539533 NRSN2Q9GZP1 204 aa15.69■□□□□ 0.1
PCDHB17P-201ENST00000539533 C11orf54Q9H0W9 315 aaPredicted RBP15.69■□□□□ 0.1
PCDHB17P-201ENST00000539533 POLR2J3Q9H1A7 115 aaKnown RBP15.69■□□□□ 0.1
PCDHB17P-201ENST00000539533 NUFIP1Q9UHK0 495 aaKnown RBP15.69■□□□□ 0.1
PCDHB17P-201ENST00000539533 A0A1W2PQL4 384 aaPredicted RBP15.68■□□□□ 0.1
PCDHB17P-201ENST00000539533 IDSB3KWA1 339 aa15.68■□□□□ 0.1
PCDHB17P-201ENST00000539533 CLEC2LP0C7M8 214 aa15.68■□□□□ 0.1
PCDHB17P-201ENST00000539533 MMP11P24347 488 aa15.68■□□□□ 0.1
PCDHB17P-201ENST00000539533 HTR2AP28223 471 aa15.68■□□□□ 0.1
PCDHB17P-201ENST00000539533 PPICP45877 212 aa15.68■□□□□ 0.1
PCDHB17P-201ENST00000539533 IL11RAQ14626 422 aa15.68■□□□□ 0.1
PCDHB17P-201ENST00000539533 TRAM2Q15035 370 aa15.68■□□□□ 0.1
PCDHB17P-201ENST00000539533 OCLNQ16625 522 aa15.68■□□□□ 0.1
PCDHB17P-201ENST00000539533 OVCH1Q7RTY7 1134 aa15.68■□□□□ 0.1
PCDHB17P-201ENST00000539533 RDH10Q8IZV5 341 aa15.68■□□□□ 0.1
PCDHB17P-201ENST00000539533 CLDN22Q8N7P3 220 aa15.68■□□□□ 0.1
PCDHB17P-201ENST00000539533 SLC41A3Q96GZ6 507 aa15.68■□□□□ 0.1
PCDHB17P-201ENST00000539533 G6PC3Q9BUM1 346 aa15.68■□□□□ 0.1
PCDHB17P-201ENST00000539533 BEX2Q9BXY8 128 aa15.68■□□□□ 0.1
PCDHB17P-201ENST00000539533 PLEKHB1Q9UF11 243 aaPredicted RBP15.68■□□□□ 0.1
PCDHB17P-201ENST00000539533 PRELID1Q9Y255 219 aa15.68■□□□□ 0.1
PCDHB17P-201ENST00000539533 A0A0G2JMP0 313 aa15.68■□□□□ 0.1
PCDHB17P-201ENST00000539533 FABP12A6NFH5 140 aa15.68■□□□□ 0.1
PCDHB17P-201ENST00000539533 NPIPB9F8W1W9 429 aa15.68■□□□□ 0.1
PCDHB17P-201ENST00000539533 GUSBP08236 651 aa15.68■□□□□ 0.1
PCDHB17P-201ENST00000539533 CD59P13987 128 aa15.68■□□□□ 0.1
PCDHB17P-201ENST00000539533 DRD5P21918 477 aa15.68■□□□□ 0.1
PCDHB17P-201ENST00000539533 GDPD1Q8N9F7 314 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms