RNA–Protein interactions for RNA: ENST00000538696.5

CLN6-202, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2 BASIC

Gene CLN6, Length 1,343 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-202ENST00000538696 SLC35B4Q969S0 331 aa15.64■□□□□ 0.09
CLN6-202ENST00000538696 GTPBP3Q969Y2 492 aaKnown RBP15.64■□□□□ 0.09
CLN6-202ENST00000538696 TAAR6Q96RI8 345 aa15.64■□□□□ 0.09
CLN6-202ENST00000538696 ZNF559Q9BR84 538 aa15.64■□□□□ 0.09
CLN6-202ENST00000538696 POLR2J2Q9GZM3 115 aaKnown RBP15.64■□□□□ 0.09
CLN6-202ENST00000538696 LAT2Q9GZY6 243 aa15.64■□□□□ 0.09
CLN6-202ENST00000538696 POLR2J3Q9H1A7 115 aaKnown RBP15.64■□□□□ 0.09
CLN6-202ENST00000538696 DSN1Q9H410 356 aa15.64■□□□□ 0.09
CLN6-202ENST00000538696 ZNF703Q9H7S9 590 aaPredicted RBP15.64■□□□□ 0.09
CLN6-202ENST00000538696 EXOSC3Q9NQT5 275 aaKnown RBP15.64■□□□□ 0.09
CLN6-202ENST00000538696 PAPOLBQ9NRJ5 636 aaKnown RBP15.64■□□□□ 0.09
CLN6-202ENST00000538696 ICAM5Q9UMF0 924 aa15.64■□□□□ 0.09
CLN6-202ENST00000538696 KMT2BQ9UMN6 2715 aaPredicted RBP15.63■□□□□ 0.09
CLN6-202ENST00000538696 TRAPPC13A5PLN9 417 aa15.63■□□□□ 0.09
CLN6-202ENST00000538696 FAM166BA8MTA8 275 aa15.63■□□□□ 0.09
CLN6-202ENST00000538696 OR10H3O60404 316 aa15.63■□□□□ 0.09
CLN6-202ENST00000538696 GASTP01350 101 aa15.63■□□□□ 0.09
CLN6-202ENST00000538696 IFNA8P32881 189 aa15.63■□□□□ 0.09
CLN6-202ENST00000538696 P2RX1P51575 399 aa15.63■□□□□ 0.09
CLN6-202ENST00000538696 PLGLB1Q02325 96 aa15.63■□□□□ 0.09
CLN6-202ENST00000538696 HYAL4Q2M3T9 481 aa15.63■□□□□ 0.09
CLN6-202ENST00000538696 RNFT1Q5M7Z0 435 aa15.63■□□□□ 0.09
CLN6-202ENST00000538696 ZNF550Q7Z398 422 aa15.63■□□□□ 0.09
CLN6-202ENST00000538696 TMCO5AQ8N6Q1 288 aa15.63■□□□□ 0.09
CLN6-202ENST00000538696 ZNF555Q8NEP9 628 aa15.63■□□□□ 0.09
CLN6-202ENST00000538696 OR4K5Q8NGD3 323 aa15.63■□□□□ 0.09
CLN6-202ENST00000538696 GNRHR2Q96P88 292 aa15.63■□□□□ 0.09
CLN6-202ENST00000538696 NR1H4Q96RI1 486 aaPredicted RBP15.63■□□□□ 0.09
CLN6-202ENST00000538696 GABARAPL3Q9BY60 117 aa15.63■□□□□ 0.09
CLN6-202ENST00000538696 UBQLN3Q9H347 655 aa15.63■□□□□ 0.09
CLN6-202ENST00000538696 ANKRD19PQ9H560 264 aa15.63■□□□□ 0.09
CLN6-202ENST00000538696 HHATLQ9HCP6 504 aa15.63■□□□□ 0.09
CLN6-202ENST00000538696 SLC7A7Q9UM01 511 aa15.63■□□□□ 0.09
CLN6-202ENST00000538696 POFUT2Q9Y2G5 429 aa15.63■□□□□ 0.09
CLN6-202ENST00000538696 A0A087WUU8 490 aa15.62■□□□□ 0.09
CLN6-202ENST00000538696 ANKUB1A6NFN9 424 aa15.62■□□□□ 0.09
CLN6-202ENST00000538696 EIF4E1BA6NMX2 242 aaKnown RBP15.62■□□□□ 0.09
CLN6-202ENST00000538696 ADAP00813 363 aa15.62■□□□□ 0.09
CLN6-202ENST00000538696 POU2F1P14859 743 aa15.62■□□□□ 0.09
CLN6-202ENST00000538696 CDH2P19022 906 aaPredicted RBP15.62■□□□□ 0.09
CLN6-202ENST00000538696 MSX1P28360 303 aa15.62■□□□□ 0.09
CLN6-202ENST00000538696 CCR4P51679 360 aa15.62■□□□□ 0.09
CLN6-202ENST00000538696 UGT2B15P54855 530 aa15.62■□□□□ 0.09
CLN6-202ENST00000538696 SUMO3P55854 103 aaPredicted RBP15.62■□□□□ 0.09
CLN6-202ENST00000538696 WDR88Q6ZMY6 472 aa15.62■□□□□ 0.09
CLN6-202ENST00000538696 TMEM251Q8N6I4 163 aa15.62■□□□□ 0.09
CLN6-202ENST00000538696 TOR1AIP2Q8NFQ8 470 aa15.62■□□□□ 0.09
CLN6-202ENST00000538696 SLC38A4Q969I6 547 aa15.62■□□□□ 0.09
CLN6-202ENST00000538696 PRSS27Q9BQR3 290 aa15.62■□□□□ 0.09
CLN6-202ENST00000538696 TMEM27Q9HBJ8 222 aa15.62■□□□□ 0.09
CLN6-202ENST00000538696 MGAT4BQ9UQ53 548 aa15.62■□□□□ 0.09
CLN6-202ENST00000538696 A0A0B4J2E0 115 aa15.61■□□□□ 0.09
CLN6-202ENST00000538696 A0A1B0GWA3 101 aa15.61■□□□□ 0.09
CLN6-202ENST00000538696 A0A1B0GX12 115 aa15.61■□□□□ 0.09
CLN6-202ENST00000538696 E9PQ18 207 aa15.61■□□□□ 0.09
CLN6-202ENST00000538696 ACOT7O00154 380 aa15.61■□□□□ 0.09
CLN6-202ENST00000538696 BCKDKO14874 412 aa15.61■□□□□ 0.09
CLN6-202ENST00000538696 SLC16A6O15403 523 aa15.61■□□□□ 0.09
CLN6-202ENST00000538696 PIP5K1CO60331 668 aa15.61■□□□□ 0.09
CLN6-202ENST00000538696 CBR3O75828 277 aa15.61■□□□□ 0.09
CLN6-202ENST00000538696 ZNF24P17028 368 aa15.61■□□□□ 0.09
CLN6-202ENST00000538696 PTNP21246 168 aa15.61■□□□□ 0.09
CLN6-202ENST00000538696 GDF1P27539 372 aa15.61■□□□□ 0.09
CLN6-202ENST00000538696 EPHA2P29317 976 aa15.61■□□□□ 0.09
CLN6-202ENST00000538696 RYKP34925 604 aa15.61■□□□□ 0.09
CLN6-202ENST00000538696 PPIAP62937 165 aaKnown RBP15.61■□□□□ 0.09
CLN6-202ENST00000538696 MYBPC1Q00872 1141 aa15.61■□□□□ 0.09
CLN6-202ENST00000538696 TTC23Q5W5X9 447 aa15.61■□□□□ 0.09
CLN6-202ENST00000538696 KLHL17Q6TDP4 642 aa15.61■□□□□ 0.09
CLN6-202ENST00000538696 ZNF730Q6ZMV8 503 aa15.61■□□□□ 0.09
CLN6-202ENST00000538696 MEX3DQ86XN8 651 aaKnown RBP15.61■□□□□ 0.09
CLN6-202ENST00000538696 ZNF440Q8IYI8 595 aa15.61■□□□□ 0.09
CLN6-202ENST00000538696 OR5W2Q8NH69 310 aa15.61■□□□□ 0.09
CLN6-202ENST00000538696 TMEM255BQ8WV15 326 aa15.61■□□□□ 0.09
CLN6-202ENST00000538696 ZNF524Q96C55 264 aa15.61■□□□□ 0.09
CLN6-202ENST00000538696 C1GALT1C1Q96EU7 318 aa15.61■□□□□ 0.09
CLN6-202ENST00000538696 DGCR6LQ9BY27 220 aa15.61■□□□□ 0.09
CLN6-202ENST00000538696 TRIM2Q9C040 744 aa15.61■□□□□ 0.09
CLN6-202ENST00000538696 ZNF556Q9HAH1 456 aa15.61■□□□□ 0.09
CLN6-202ENST00000538696 B4GALT7Q9UBV7 327 aa15.61■□□□□ 0.09
CLN6-202ENST00000538696 LOC100130705A0A1B0GUX0 176 aa15.6■□□□□ 0.09
CLN6-202ENST00000538696 CDC40O60508 579 aaKnown RBP eCLIP15.6■□□□□ 0.09
CLN6-202ENST00000538696 CELA3AP09093 270 aa15.6■□□□□ 0.09
CLN6-202ENST00000538696 SRD5A2P31213 254 aa15.6■□□□□ 0.09
CLN6-202ENST00000538696 MAGEA5P43359 124 aa15.6■□□□□ 0.09
CLN6-202ENST00000538696 SLC6A8P48029 635 aa15.6■□□□□ 0.09
CLN6-202ENST00000538696 CBFBQ13951 182 aa15.6■□□□□ 0.09
CLN6-202ENST00000538696 TOMM34Q15785 309 aaPredicted RBP15.6■□□□□ 0.09
CLN6-202ENST00000538696 ZNF613Q6PF04 617 aa15.6■□□□□ 0.09
CLN6-202ENST00000538696 ARSKQ6UWY0 536 aa15.6■□□□□ 0.09
CLN6-202ENST00000538696 Q6ZPB1 254 aaPredicted RBP15.6■□□□□ 0.09
CLN6-202ENST00000538696 PRICKLE2Q7Z3G6 844 aa15.6■□□□□ 0.09
CLN6-202ENST00000538696 ZER1Q7Z7L7 766 aa15.6■□□□□ 0.09
CLN6-202ENST00000538696 SLC22A16Q86VW1 577 aa15.6■□□□□ 0.09
CLN6-202ENST00000538696 CADM2Q8N3J6 435 aa15.6■□□□□ 0.09
CLN6-202ENST00000538696 FAM109AQ8N4B1 249 aa15.6■□□□□ 0.09
CLN6-202ENST00000538696 LINC00471Q8N535 108 aa15.6■□□□□ 0.09
CLN6-202ENST00000538696 GPR119Q8TDV5 335 aa15.6■□□□□ 0.09
CLN6-202ENST00000538696 ACOT11Q8WXI4 607 aaPredicted RBP15.6■□□□□ 0.09
CLN6-202ENST00000538696 MUS81Q96NY9 551 aa15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms