RNA–Protein interactions for RNA: ENST00000536011.5

RTN3-207, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 992 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-207ENST00000536011 BSPH1Q075Z2 132 aa11.62□□□□□ -0.55
RTN3-207ENST00000536011 MAPK14Q16539 360 aa11.62□□□□□ -0.55
RTN3-207ENST00000536011 ZNF672Q499Z4 452 aaPredicted RBP11.62□□□□□ -0.55
RTN3-207ENST00000536011 FRRS1Q6ZNA5 592 aa11.62□□□□□ -0.55
RTN3-207ENST00000536011 UBE2J2Q8N2K1 259 aa11.62□□□□□ -0.55
RTN3-207ENST00000536011 CIARTQ8N365 385 aaPredicted RBP11.62□□□□□ -0.55
RTN3-207ENST00000536011 ZNF454Q8N9F8 522 aa11.62□□□□□ -0.55
RTN3-207ENST00000536011 GLB1L3Q8NCI6 653 aaPredicted RBP11.62□□□□□ -0.55
RTN3-207ENST00000536011 SMAP2Q8WU79 429 aaPredicted RBP11.62□□□□□ -0.55
RTN3-207ENST00000536011 APH1AQ96BI3 265 aa11.62□□□□□ -0.55
RTN3-207ENST00000536011 DDIT4LQ96D03 193 aa11.62□□□□□ -0.55
RTN3-207ENST00000536011 ZNF300Q96RE9 604 aaPredicted RBP11.62□□□□□ -0.55
RTN3-207ENST00000536011 PARD6BQ9BYG5 372 aa11.62□□□□□ -0.55
RTN3-207ENST00000536011 C20orf27Q9GZN8 174 aa11.62□□□□□ -0.55
RTN3-207ENST00000536011 ALG2Q9H553 416 aa11.62□□□□□ -0.55
RTN3-207ENST00000536011 CTPS2Q9NRF8 586 aa11.62□□□□□ -0.55
RTN3-207ENST00000536011 AIG1Q9NVV5 245 aa11.62□□□□□ -0.55
RTN3-207ENST00000536011 ING1Q9UK53 422 aaPredicted RBP11.62□□□□□ -0.55
RTN3-207ENST00000536011 PRDM4Q9UKN5 801 aa11.62□□□□□ -0.55
RTN3-207ENST00000536011 NOSIPQ9Y314 301 aaKnown RBP11.62□□□□□ -0.55
RTN3-207ENST00000536011 CCDC154A6NI56 674 aa11.61□□□□□ -0.55
RTN3-207ENST00000536011 OR5H1A6NKK0 313 aa11.61□□□□□ -0.55
RTN3-207ENST00000536011 SLCO1B7G3V0H7 640 aa11.61□□□□□ -0.55
RTN3-207ENST00000536011 HMGN4O00479 90 aa11.61□□□□□ -0.55
RTN3-207ENST00000536011 EIF1BO60739 113 aaKnown RBP11.61□□□□□ -0.55
RTN3-207ENST00000536011 KRT75O95678 551 aa11.61□□□□□ -0.55
RTN3-207ENST00000536011 PGRP06401 933 aa11.61□□□□□ -0.55
RTN3-207ENST00000536011 BST1Q10588 318 aa11.61□□□□□ -0.55
RTN3-207ENST00000536011 FBXW9Q5XUX1 488 aa11.61□□□□□ -0.55
RTN3-207ENST00000536011 KLHL17Q6TDP4 642 aa11.61□□□□□ -0.55
RTN3-207ENST00000536011 DNAJC14Q6Y2X3 702 aaPredicted RBP11.61□□□□□ -0.55
RTN3-207ENST00000536011 RNF130Q86XS8 419 aa11.61□□□□□ -0.55
RTN3-207ENST00000536011 ZNF524Q96C55 264 aa11.61□□□□□ -0.55
RTN3-207ENST00000536011 OR52E6Q96RD3 313 aa11.61□□□□□ -0.55
RTN3-207ENST00000536011 MTHFD2LQ9H903 347 aaPredicted RBP11.61□□□□□ -0.55
RTN3-207ENST00000536011 CACYBPQ9HB71 228 aaKnown RBP11.61□□□□□ -0.55
RTN3-207ENST00000536011 BARX1Q9HBU1 254 aaPredicted RBP11.61□□□□□ -0.55
RTN3-207ENST00000536011 THAP1Q9NVV9 213 aa11.61□□□□□ -0.55
RTN3-207ENST00000536011 TMEM181Q9P2C4 612 aa11.61□□□□□ -0.55
RTN3-207ENST00000536011 PRSS50Q9UI38 385 aa11.61□□□□□ -0.55
RTN3-207ENST00000536011 MGAT4BQ9UQ53 548 aa11.61□□□□□ -0.55
RTN3-207ENST00000536011 TRAPPC4Q9Y296 219 aa11.61□□□□□ -0.55
RTN3-207ENST00000536011 USF3Q68DE3 2245 aa11.6□□□□□ -0.55
RTN3-207ENST00000536011 CIB4A0PJX0 185 aa11.6□□□□□ -0.55
RTN3-207ENST00000536011 AGAP5A6NIR3 686 aa11.6□□□□□ -0.55
RTN3-207ENST00000536011 C9JVG2 144 aa11.6□□□□□ -0.55
RTN3-207ENST00000536011 OVOL3O00110 214 aa11.6□□□□□ -0.55
RTN3-207ENST00000536011 FAAHO00519 579 aa11.6□□□□□ -0.55
RTN3-207ENST00000536011 HDAC3O15379 428 aa11.6□□□□□ -0.55
RTN3-207ENST00000536011 MRPL33O75394 65 aaKnown RBP11.6□□□□□ -0.55
RTN3-207ENST00000536011 DBIP07108 87 aaKnown RBP11.6□□□□□ -0.55
RTN3-207ENST00000536011 NR2F1P10589 423 aa11.6□□□□□ -0.55
RTN3-207ENST00000536011 IDO1P14902 403 aa11.6□□□□□ -0.55
RTN3-207ENST00000536011 IL7RP16871 459 aa11.6□□□□□ -0.55
RTN3-207ENST00000536011 IDUAP35475 653 aa11.6□□□□□ -0.55
RTN3-207ENST00000536011 IDH2P48735 452 aaKnown RBP11.6□□□□□ -0.55
RTN3-207ENST00000536011 POLR2HP52434 150 aaKnown RBP11.6□□□□□ -0.55
RTN3-207ENST00000536011 SLC16A1P53985 500 aa11.6□□□□□ -0.55
RTN3-207ENST00000536011 CDH11P55287 796 aa11.6□□□□□ -0.55
RTN3-207ENST00000536011 PHC1P78364 1004 aa11.6□□□□□ -0.55
RTN3-207ENST00000536011 SLC35A1P78382 337 aa11.6□□□□□ -0.55
RTN3-207ENST00000536011 CHRNEQ04844 493 aa11.6□□□□□ -0.55
RTN3-207ENST00000536011 FUT5Q11128 374 aa11.6□□□□□ -0.55
RTN3-207ENST00000536011 VEZF1Q14119 521 aa11.6□□□□□ -0.55
RTN3-207ENST00000536011 CLEC12BQ2HXU8 276 aa11.6□□□□□ -0.55
RTN3-207ENST00000536011 TNFAIP8L3Q5GJ75 292 aa11.6□□□□□ -0.55
RTN3-207ENST00000536011 ATG16L1Q676U5 607 aa11.6□□□□□ -0.55
RTN3-207ENST00000536011 OR7E24Q6IFN5 339 aa11.6□□□□□ -0.55
RTN3-207ENST00000536011 TMEM108Q6UXF1 575 aa11.6□□□□□ -0.55
RTN3-207ENST00000536011 LRRC74BQ6ZQY2 392 aa11.6□□□□□ -0.55
RTN3-207ENST00000536011 ZNF621Q6ZSS3 439 aa11.6□□□□□ -0.55
RTN3-207ENST00000536011 OLIG3Q7RTU3 272 aa11.6□□□□□ -0.55
RTN3-207ENST00000536011 PEX5LQ8IYB4 626 aa11.6□□□□□ -0.55
RTN3-207ENST00000536011 ZNF440Q8IYI8 595 aa11.6□□□□□ -0.55
RTN3-207ENST00000536011 ANKRD42Q8N9B4 389 aa11.6□□□□□ -0.55
RTN3-207ENST00000536011 WDR60Q8WVS4 1066 aa11.6□□□□□ -0.55
RTN3-207ENST00000536011 ZNF75CPQ92670 426 aaPredicted RBP11.6□□□□□ -0.55
RTN3-207ENST00000536011 ZNF775Q96BV0 537 aaPredicted RBP11.6□□□□□ -0.55
RTN3-207ENST00000536011 HS6ST2Q96MM7 605 aa11.6□□□□□ -0.55
RTN3-207ENST00000536011 NAA11Q9BSU3 229 aaPredicted RBP11.6□□□□□ -0.55
RTN3-207ENST00000536011 TRIM2Q9C040 744 aa11.6□□□□□ -0.55
RTN3-207ENST00000536011 PNPOQ9NVS9 261 aa11.6□□□□□ -0.55
RTN3-207ENST00000536011 PARPBPQ9NWS1 579 aa11.6□□□□□ -0.55
RTN3-207ENST00000536011 ASB6Q9NWX5 421 aa11.6□□□□□ -0.55
RTN3-207ENST00000536011 TAS2R16Q9NYV7 291 aa11.6□□□□□ -0.55
RTN3-207ENST00000536011 CALML5Q9NZT1 146 aa11.6□□□□□ -0.55
RTN3-207ENST00000536011 RAB21Q9UL25 225 aa11.6□□□□□ -0.55
RTN3-207ENST00000536011 SLC9A8Q9Y2E8 581 aa11.6□□□□□ -0.55
RTN3-207ENST00000536011 JMJD1CQ15652 2540 aa11.6□□□□□ -0.55
RTN3-207ENST00000536011 FN1P02751 2386 aaKnown RBP11.6□□□□□ -0.55
RTN3-207ENST00000536011 FREM1Q5H8C1 2179 aa11.6□□□□□ -0.55
RTN3-207ENST00000536011 TMED7-TICAM2A0A0A6YYA0 188 aa11.59□□□□□ -0.55
RTN3-207ENST00000536011 TMEM247A6NEH6 219 aa11.59□□□□□ -0.55
RTN3-207ENST00000536011 CFAP73A6NFT4 308 aa11.59□□□□□ -0.55
RTN3-207ENST00000536011 CCT8L1PA6NM43 557 aa11.59□□□□□ -0.55
RTN3-207ENST00000536011 ZNF716A6NP11 495 aa11.59□□□□□ -0.55
RTN3-207ENST00000536011 SDHDO14521 159 aa11.59□□□□□ -0.55
RTN3-207ENST00000536011 RFXANKO14593 260 aa11.59□□□□□ -0.55
RTN3-207ENST00000536011 ZNF208O43345 1280 aa11.59□□□□□ -0.55
RTN3-207ENST00000536011 PGM3O95394 542 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms