RNA–Protein interactions for RNA: ENST00000535659.6

CNN1-202, Transcript of calponin 1, humanhuman

TSL 2 BASIC

Gene CNN1, Length 1,527 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN1-202ENST00000535659 ELOA3BQ3SY89 546 aa14.05□□□□□ -0.16
CNN1-202ENST00000535659 LINC00114Q6XXX2 140 aa14.05□□□□□ -0.16
CNN1-202ENST00000535659 OFCC1Q8IZS5 231 aa14.05□□□□□ -0.16
CNN1-202ENST00000535659 PIK3C3Q8NEB9 887 aa14.05□□□□□ -0.16
CNN1-202ENST00000535659 ATP6V1C2Q8NEY4 427 aa14.05□□□□□ -0.16
CNN1-202ENST00000535659 ELOA3Q8NG57 546 aa14.05□□□□□ -0.16
CNN1-202ENST00000535659 MPP4Q96JB8 637 aa14.05□□□□□ -0.16
CNN1-202ENST00000535659 TIMP4Q99727 224 aa14.05□□□□□ -0.16
CNN1-202ENST00000535659 ARMC1Q9NVT9 282 aa14.05□□□□□ -0.16
CNN1-202ENST00000535659 SPRR3Q9UBC9 169 aa14.05□□□□□ -0.16
CNN1-202ENST00000535659 CHRNA9Q9UGM1 479 aa14.05□□□□□ -0.16
CNN1-202ENST00000535659 TMEM72A0PK05 275 aa14.05□□□□□ -0.16
CNN1-202ENST00000535659 ZNF208O43345 1280 aa14.05□□□□□ -0.16
CNN1-202ENST00000535659 OPN1LWP04000 364 aa14.05□□□□□ -0.16
CNN1-202ENST00000535659 EDN3P14138 238 aa14.05□□□□□ -0.16
CNN1-202ENST00000535659 SMIM11AP58511 58 aa14.05□□□□□ -0.16
CNN1-202ENST00000535659 HSF1Q00613 529 aa14.05□□□□□ -0.16
CNN1-202ENST00000535659 FOXD4Q12950 439 aaPredicted RBP14.05□□□□□ -0.16
CNN1-202ENST00000535659 ZNF605Q86T29 641 aa14.05□□□□□ -0.16
CNN1-202ENST00000535659 SARAFQ96BY9 339 aa14.05□□□□□ -0.16
CNN1-202ENST00000535659 PRSS27Q9BQR3 290 aa14.05□□□□□ -0.16
CNN1-202ENST00000535659 SPIN1Q9Y657 262 aaPredicted RBP14.05□□□□□ -0.16
CNN1-202ENST00000535659 OR14I1A6ND48 311 aa14.04□□□□□ -0.16
CNN1-202ENST00000535659 GJE1A6NN92 205 aa14.04□□□□□ -0.16
CNN1-202ENST00000535659 A8MVM7 634 aa14.04□□□□□ -0.16
CNN1-202ENST00000535659 B8ZZF3 427 aa14.04□□□□□ -0.16
CNN1-202ENST00000535659 HNRNPRO43390 633 aaKnown RBP14.04□□□□□ -0.16
CNN1-202ENST00000535659 KRT36O76013 467 aa14.04□□□□□ -0.16
CNN1-202ENST00000535659 H1F0P07305 194 aaKnown RBP14.04□□□□□ -0.16
CNN1-202ENST00000535659 CPN1P15169 458 aa14.04□□□□□ -0.16
CNN1-202ENST00000535659 POU3F2P20265 443 aaPredicted RBP14.04□□□□□ -0.16
CNN1-202ENST00000535659 FUT4P22083 530 aa14.04□□□□□ -0.16
CNN1-202ENST00000535659 CLK1P49759 484 aaKnown RBP14.04□□□□□ -0.16
CNN1-202ENST00000535659 LHX2P50458 406 aa14.04□□□□□ -0.16
CNN1-202ENST00000535659 CRYZQ08257 329 aaKnown RBP14.04□□□□□ -0.16
CNN1-202ENST00000535659 TRAM2Q15035 370 aa14.04□□□□□ -0.16
CNN1-202ENST00000535659 TMEM176BQ3YBM2 270 aaPredicted RBP14.04□□□□□ -0.16
CNN1-202ENST00000535659 C3orf33Q6P1S2 294 aa14.04□□□□□ -0.16
CNN1-202ENST00000535659 GFRALQ6UXV0 394 aa14.04□□□□□ -0.16
CNN1-202ENST00000535659 LSRQ86X29 649 aaPredicted RBP14.04□□□□□ -0.16
CNN1-202ENST00000535659 NKAIN4Q8IVV8 208 aa14.04□□□□□ -0.16
CNN1-202ENST00000535659 SLC25A43Q8WUT9 341 aaPredicted RBP14.04□□□□□ -0.16
CNN1-202ENST00000535659 PYDC1Q8WXC3 89 aa14.04□□□□□ -0.16
CNN1-202ENST00000535659 DDIT4LQ96D03 193 aa14.04□□□□□ -0.16
CNN1-202ENST00000535659 HS6ST2Q96MM7 605 aa14.04□□□□□ -0.16
CNN1-202ENST00000535659 ANKRD19PQ9H560 264 aa14.04□□□□□ -0.16
CNN1-202ENST00000535659 TMEM185BQ9H7F4 350 aa14.04□□□□□ -0.16
CNN1-202ENST00000535659 TNFRSF10DQ9UBN6 386 aa14.04□□□□□ -0.16
CNN1-202ENST00000535659 TESMINQ9Y4I5 508 aa14.04□□□□□ -0.16
CNN1-202ENST00000535659 FREM3P0C091 2139 aa14.04□□□□□ -0.16
CNN1-202ENST00000535659 A0A1W2PRQ8 180 aa14.03□□□□□ -0.16
CNN1-202ENST00000535659 NPIPA2E9PIF3 369 aa14.03□□□□□ -0.16
CNN1-202ENST00000535659 NPIPA3F8WFD2 350 aa14.03□□□□□ -0.16
CNN1-202ENST00000535659 GADD45GO95257 159 aa14.03□□□□□ -0.16
CNN1-202ENST00000535659 CST1P01037 141 aa14.03□□□□□ -0.16
CNN1-202ENST00000535659 PRB1P04280 392 aa14.03□□□□□ -0.16
CNN1-202ENST00000535659 TFPIP10646 304 aa14.03□□□□□ -0.16
CNN1-202ENST00000535659 ZNF708P17019 499 aa14.03□□□□□ -0.16
CNN1-202ENST00000535659 RRM2P31350 389 aa14.03□□□□□ -0.16
CNN1-202ENST00000535659 PTGS2P35354 604 aa14.03□□□□□ -0.16
CNN1-202ENST00000535659 HMGA2P52926 109 aa14.03□□□□□ -0.16
CNN1-202ENST00000535659 CLDN18P56856 261 aa14.03□□□□□ -0.16
CNN1-202ENST00000535659 DGCR6Q14129 220 aa14.03□□□□□ -0.16
CNN1-202ENST00000535659 DCST1Q5T197 706 aa14.03□□□□□ -0.16
CNN1-202ENST00000535659 OR2T5Q6IEZ7 315 aa14.03□□□□□ -0.16
CNN1-202ENST00000535659 ZFP1Q6P2D0 407 aa14.03□□□□□ -0.16
CNN1-202ENST00000535659 TTC33Q6PID6 262 aaPredicted RBP14.03□□□□□ -0.16
CNN1-202ENST00000535659 WDR88Q6ZMY6 472 aa14.03□□□□□ -0.16
CNN1-202ENST00000535659 FGD2Q7Z6J4 655 aa14.03□□□□□ -0.16
CNN1-202ENST00000535659 CHERPQ8IWX8 916 aaKnown RBP14.03□□□□□ -0.16
CNN1-202ENST00000535659 OR2T29Q8NH02 315 aa14.03□□□□□ -0.16
CNN1-202ENST00000535659 STK35Q8TDR2 534 aa14.03□□□□□ -0.16
CNN1-202ENST00000535659 SMPDL3BQ92485 455 aa14.03□□□□□ -0.16
CNN1-202ENST00000535659 WDYHV1Q96HA8 205 aa14.03□□□□□ -0.16
CNN1-202ENST00000535659 DHRS1Q96LJ7 313 aa14.03□□□□□ -0.16
CNN1-202ENST00000535659 ZNF426Q9BUY5 554 aa14.03□□□□□ -0.16
CNN1-202ENST00000535659 POTEKPQ9BYX7 375 aa14.03□□□□□ -0.16
CNN1-202ENST00000535659 MAN2C1Q9NTJ4 1040 aa14.03□□□□□ -0.16
CNN1-202ENST00000535659 ADAMDEC1O15204 470 aa14.02□□□□□ -0.16
CNN1-202ENST00000535659 ZNHIT1O43257 154 aa14.02□□□□□ -0.16
CNN1-202ENST00000535659 TIPRLO75663 272 aa14.02□□□□□ -0.16
CNN1-202ENST00000535659 SFTPDP35247 375 aa14.02□□□□□ -0.16
CNN1-202ENST00000535659 RBM34P42696 430 aaKnown RBP14.02□□□□□ -0.16
CNN1-202ENST00000535659 SUCLG1P53597 346 aaKnown RBP14.02□□□□□ -0.16
CNN1-202ENST00000535659 CLDN20P56880 219 aa14.02□□□□□ -0.16
CNN1-202ENST00000535659 SPIBQ01892 262 aa14.02□□□□□ -0.16
CNN1-202ENST00000535659 SRYQ05066 204 aa14.02□□□□□ -0.16
CNN1-202ENST00000535659 EGR4Q05215 589 aa14.02□□□□□ -0.16
CNN1-202ENST00000535659 GXYLT1Q4G148 440 aa14.02□□□□□ -0.16
CNN1-202ENST00000535659 SYT14P1Q58G82 188 aa14.02□□□□□ -0.16
CNN1-202ENST00000535659 ESPNLQ6ZVH7 1005 aa14.02□□□□□ -0.16
CNN1-202ENST00000535659 GGNQ86UU5 652 aa14.02□□□□□ -0.16
CNN1-202ENST00000535659 UBQLNLQ8IYU4 475 aa14.02□□□□□ -0.16
CNN1-202ENST00000535659 ZNF843Q8N446 348 aa14.02□□□□□ -0.16
CNN1-202ENST00000535659 OR52J3Q8NH60 311 aa14.02□□□□□ -0.16
CNN1-202ENST00000535659 TMEM255BQ8WV15 326 aa14.02□□□□□ -0.16
CNN1-202ENST00000535659 KLHL15Q96M94 604 aa14.02□□□□□ -0.16
CNN1-202ENST00000535659 TMEM43Q9BTV4 400 aa14.02□□□□□ -0.16
CNN1-202ENST00000535659 OR11A1Q9GZK7 315 aa14.02□□□□□ -0.16
CNN1-202ENST00000535659 S100A14Q9HCY8 104 aa14.02□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms