RNA–Protein interactions for RNA: ENST00000535375.1

PRKDC-205, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 464 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-205ENST00000535375 VRK2Q86Y07 508 aa3.12□□□□□ -1.91
PRKDC-205ENST00000535375 CNIH3Q8TBE1 160 aa3.12□□□□□ -1.91
PRKDC-205ENST00000535375 MARCH1Q8TCQ1 289 aa3.12□□□□□ -1.91
PRKDC-205ENST00000535375 OR5B2Q96R09 309 aa3.12□□□□□ -1.91
PRKDC-205ENST00000535375 OMDQ99983 421 aa3.12□□□□□ -1.91
PRKDC-205ENST00000535375 GSDMCQ9BYG8 508 aa3.12□□□□□ -1.91
PRKDC-205ENST00000535375 MRPL39Q9NYK5 338 aaKnown RBP3.12□□□□□ -1.91
PRKDC-205ENST00000535375 ZNF225Q9UK10 706 aa3.12□□□□□ -1.91
PRKDC-205ENST00000535375 SNX6Q9UNH7 406 aa3.12□□□□□ -1.91
PRKDC-205ENST00000535375 MRPS33Q9Y291 106 aaKnown RBP3.12□□□□□ -1.91
PRKDC-205ENST00000535375 OR10H1Q9Y4A9 318 aa3.12□□□□□ -1.91
PRKDC-205ENST00000535375 SPACA6W5XKT8 324 aa3.12□□□□□ -1.91
PRKDC-205ENST00000535375 THSD7BQ9C0I4 1608 aa3.11□□□□□ -1.91
PRKDC-205ENST00000535375 A0A1W2PNV4 684 aa3.11□□□□□ -1.91
PRKDC-205ENST00000535375 A6NDX4 124 aa3.11□□□□□ -1.91
PRKDC-205ENST00000535375 BTN3A3O00478 584 aa3.11□□□□□ -1.91
PRKDC-205ENST00000535375 ICOSLGO75144 302 aa3.11□□□□□ -1.91
PRKDC-205ENST00000535375 RHOBTB1O94844 696 aa3.11□□□□□ -1.91
PRKDC-205ENST00000535375 KIAA0754O94854 1291 aa3.11□□□□□ -1.91
PRKDC-205ENST00000535375 SNAPINO95295 136 aa3.11□□□□□ -1.91
PRKDC-205ENST00000535375 ADCY5O95622 1261 aa3.11□□□□□ -1.91
PRKDC-205ENST00000535375 CAPN1P07384 714 aa3.11□□□□□ -1.91
PRKDC-205ENST00000535375 CSNK1DP48730 415 aa3.11□□□□□ -1.91
PRKDC-205ENST00000535375 CSNK1G2P78368 415 aa3.11□□□□□ -1.91
PRKDC-205ENST00000535375 CBX1P83916 185 aa3.11□□□□□ -1.91
PRKDC-205ENST00000535375 PJVKQ0ZLH3 352 aa3.11□□□□□ -1.91
PRKDC-205ENST00000535375 NDUFA9Q16795 377 aa3.11□□□□□ -1.91
PRKDC-205ENST00000535375 CEP55Q53EZ4 464 aa3.11□□□□□ -1.91
PRKDC-205ENST00000535375 PAGE3Q5JUK9 113 aa3.11□□□□□ -1.91
PRKDC-205ENST00000535375 TTC23Q5W5X9 447 aa3.11□□□□□ -1.91
PRKDC-205ENST00000535375 CENPPQ6IPU0 288 aa3.11□□□□□ -1.91
PRKDC-205ENST00000535375 UNQ9370/PRO34162Q6UXP9 181 aa3.11□□□□□ -1.91
PRKDC-205ENST00000535375 H1FOOQ8IZA3 346 aaPredicted RBP3.11□□□□□ -1.91
PRKDC-205ENST00000535375 MTURNQ8N3F0 131 aa3.11□□□□□ -1.91
PRKDC-205ENST00000535375 ZCCHC7Q8N3Z6 543 aaKnown RBP3.11□□□□□ -1.91
PRKDC-205ENST00000535375 FAM71E2Q8N5Q1 922 aa3.11□□□□□ -1.91
PRKDC-205ENST00000535375 Q8N9W7 124 aa3.11□□□□□ -1.91
PRKDC-205ENST00000535375 OR52I1Q8NGK6 324 aa3.11□□□□□ -1.91
PRKDC-205ENST00000535375 EMG1Q92979 244 aaKnown RBP3.11□□□□□ -1.91
PRKDC-205ENST00000535375 MYLPFQ96A32 169 aa3.11□□□□□ -1.91
PRKDC-205ENST00000535375 TTC25Q96NG3 672 aa3.11□□□□□ -1.91
PRKDC-205ENST00000535375 CYP2S1Q96SQ9 504 aa3.11□□□□□ -1.91
PRKDC-205ENST00000535375 CHRDL1Q9BU40 450 aa3.11□□□□□ -1.91
PRKDC-205ENST00000535375 RNF126Q9BV68 326 aa3.11□□□□□ -1.91
PRKDC-205ENST00000535375 MAGT1Q9H0U3 335 aa3.11□□□□□ -1.91
PRKDC-205ENST00000535375 TTC21BQ7Z4L5 1316 aa3.11□□□□□ -1.91
PRKDC-205ENST00000535375 PTCH1Q13635 1447 aa3.1□□□□□ -1.91
PRKDC-205ENST00000535375 IGKV2-28A0A075B6P5 120 aa3.1□□□□□ -1.91
PRKDC-205ENST00000535375 SYNJ2BP-COX16A0A087WUM0 186 aa3.1□□□□□ -1.91
PRKDC-205ENST00000535375 HSFX4A0A1B0GTS1 333 aaPredicted RBP3.1□□□□□ -1.91
PRKDC-205ENST00000535375 HSFX3A0A1B0GWH4 333 aaPredicted RBP3.1□□□□□ -1.91
PRKDC-205ENST00000535375 HELTA6NFD8 242 aa3.1□□□□□ -1.91
PRKDC-205ENST00000535375 ZNF705EA8MWA4 302 aaPredicted RBP3.1□□□□□ -1.91
PRKDC-205ENST00000535375 STX7O15400 261 aaKnown RBP3.1□□□□□ -1.91
PRKDC-205ENST00000535375 RIPK2O43353 540 aa3.1□□□□□ -1.91
PRKDC-205ENST00000535375 SNAI2O43623 268 aa3.1□□□□□ -1.91
PRKDC-205ENST00000535375 NPIPB7O75200 414 aa3.1□□□□□ -1.91
PRKDC-205ENST00000535375 IGKV2D-28P01615 120 aa3.1□□□□□ -1.91
PRKDC-205ENST00000535375 OPN1MWP04001 364 aa3.1□□□□□ -1.91
PRKDC-205ENST00000535375 OPN1MW2P0DN77 364 aa3.1□□□□□ -1.91
PRKDC-205ENST00000535375 OPN1MW3P0DN78 364 aa3.1□□□□□ -1.91
PRKDC-205ENST00000535375 PGCP20142 388 aa3.1□□□□□ -1.91
PRKDC-205ENST00000535375 HNF1AP20823 631 aa3.1□□□□□ -1.91
PRKDC-205ENST00000535375 UQCRC2P22695 453 aa3.1□□□□□ -1.91
PRKDC-205ENST00000535375 PRDX3P30048 256 aaKnown RBP3.1□□□□□ -1.91
PRKDC-205ENST00000535375 BDKRB1P46663 353 aa3.1□□□□□ -1.91
PRKDC-205ENST00000535375 PLA2G16P53816 162 aa3.1□□□□□ -1.91
PRKDC-205ENST00000535375 CHRNB3Q05901 458 aa3.1□□□□□ -1.91
PRKDC-205ENST00000535375 TPD52L1Q16890 204 aaPredicted RBP3.1□□□□□ -1.91
PRKDC-205ENST00000535375 ZNF691Q5VV52 312 aa3.1□□□□□ -1.91
PRKDC-205ENST00000535375 LIPNQ5VXI9 398 aa3.1□□□□□ -1.91
PRKDC-205ENST00000535375 FAM71F2Q6NXP2 309 aa3.1□□□□□ -1.91
PRKDC-205ENST00000535375 TMEM17Q86X19 198 aa3.1□□□□□ -1.91
PRKDC-205ENST00000535375 ZNF683Q8IZ20 524 aa3.1□□□□□ -1.91
PRKDC-205ENST00000535375 ANKFN1Q8N957 763 aa3.1□□□□□ -1.91
PRKDC-205ENST00000535375 NEIL3Q8TAT5 605 aa3.1□□□□□ -1.91
PRKDC-205ENST00000535375 M1APQ8TC57 530 aa3.1□□□□□ -1.91
PRKDC-205ENST00000535375 PNPT1Q8TCS8 783 aaKnown RBP3.1□□□□□ -1.91
PRKDC-205ENST00000535375 RPL3LQ92901 407 aaKnown RBP3.1□□□□□ -1.91
PRKDC-205ENST00000535375 PSKH2Q96QS6 385 aa3.1□□□□□ -1.91
PRKDC-205ENST00000535375 TBX15Q96SF7 602 aa3.1□□□□□ -1.91
PRKDC-205ENST00000535375 VCXQ9H320 206 aa3.1□□□□□ -1.91
PRKDC-205ENST00000535375 ELOVL3Q9HB03 270 aa3.1□□□□□ -1.91
PRKDC-205ENST00000535375 LTBP1Q14766 1721 aa3.1□□□□□ -1.91
PRKDC-205ENST00000535375 PSMB11A5LHX3 300 aa3.09□□□□□ -1.91
PRKDC-205ENST00000535375 FAM166BA8MTA8 275 aa3.09□□□□□ -1.91
PRKDC-205ENST00000535375 TRAF3IP2O43734 574 aaPredicted RBP3.09□□□□□ -1.91
PRKDC-205ENST00000535375 SNNO75324 88 aaPredicted RBP3.09□□□□□ -1.91
PRKDC-205ENST00000535375 UGT2B4P06133 528 aa3.09□□□□□ -1.91
PRKDC-205ENST00000535375 RNH1P13489 461 aaKnown RBP3.09□□□□□ -1.91
PRKDC-205ENST00000535375 CALB2P22676 271 aa3.09□□□□□ -1.91
PRKDC-205ENST00000535375 COX7A1P24310 79 aa3.09□□□□□ -1.91
PRKDC-205ENST00000535375 NMT1P30419 496 aaKnown RBP3.09□□□□□ -1.91
PRKDC-205ENST00000535375 PLK1P53350 603 aa3.09□□□□□ -1.91
PRKDC-205ENST00000535375 PFN3P60673 137 aa3.09□□□□□ -1.91
PRKDC-205ENST00000535375 HERVK_113P61574 105 aa3.09□□□□□ -1.91
PRKDC-205ENST00000535375 NUCB2P80303 420 aa3.09□□□□□ -1.91
PRKDC-205ENST00000535375 EWSR1Q01844 656 aaKnown RBP eCLIP3.09□□□□□ -1.91
PRKDC-205ENST00000535375 UNC119Q13432 240 aa3.09□□□□□ -1.91
PRKDC-205ENST00000535375 MAPK6Q16659 721 aa3.09□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms