RNA–Protein interactions for RNA: ENST00000534705.5

USP48-215, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 566 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-215ENST00000534705 ZNF699Q32M78 642 aa2.91□□□□□ -1.94
USP48-215ENST00000534705 C2CD6Q53TS8 623 aa2.91□□□□□ -1.94
USP48-215ENST00000534705 SFT2D3Q587I9 215 aa2.91□□□□□ -1.94
USP48-215ENST00000534705 FAM78AQ5JUQ0 283 aa2.91□□□□□ -1.94
USP48-215ENST00000534705 OGFRL1Q5TC84 451 aaPredicted RBP2.91□□□□□ -1.94
USP48-215ENST00000534705 IZUMO2Q6UXV1 221 aa2.91□□□□□ -1.94
USP48-215ENST00000534705 C4orf22Q6V702 233 aa2.91□□□□□ -1.94
USP48-215ENST00000534705 NHLRC1Q6VVB1 395 aa2.91□□□□□ -1.94
USP48-215ENST00000534705 SCARA5Q6ZMJ2 495 aa2.91□□□□□ -1.94
USP48-215ENST00000534705 MACC1Q6ZN28 852 aa2.91□□□□□ -1.94
USP48-215ENST00000534705 IDO2Q6ZQW0 420 aa2.91□□□□□ -1.94
USP48-215ENST00000534705 TAS2R42Q7RTR8 314 aa2.91□□□□□ -1.94
USP48-215ENST00000534705 CDH26Q8IXH8 852 aa2.91□□□□□ -1.94
USP48-215ENST00000534705 UBALD2Q8IYN6 164 aa2.91□□□□□ -1.94
USP48-215ENST00000534705 SPAG16Q8N0X2 631 aa2.91□□□□□ -1.94
USP48-215ENST00000534705 THEM5Q8N1Q8 247 aa2.91□□□□□ -1.94
USP48-215ENST00000534705 CENPSQ8N2Z9 138 aa2.91□□□□□ -1.94
USP48-215ENST00000534705 NATD1Q8N6N6 113 aa2.91□□□□□ -1.94
USP48-215ENST00000534705 OR52E1Q8NGJ3 308 aa2.91□□□□□ -1.94
USP48-215ENST00000534705 OR52M1Q8NGK5 317 aa2.91□□□□□ -1.94
USP48-215ENST00000534705 OR10Z1Q8NGY1 313 aa2.91□□□□□ -1.94
USP48-215ENST00000534705 VANGL1Q8TAA9 524 aaPredicted RBP2.91□□□□□ -1.94
USP48-215ENST00000534705 MAPK15Q8TD08 544 aa2.91□□□□□ -1.94
USP48-215ENST00000534705 RNF139Q8WU17 664 aa2.91□□□□□ -1.94
USP48-215ENST00000534705 TRUB1Q8WWH5 349 aaKnown RBP2.91□□□□□ -1.94
USP48-215ENST00000534705 NSMAFQ92636 917 aa2.91□□□□□ -1.94
USP48-215ENST00000534705 SMARCD2Q92925 531 aa2.91□□□□□ -1.94
USP48-215ENST00000534705 ST6GALNAC6Q969X2 333 aa2.91□□□□□ -1.94
USP48-215ENST00000534705 MYLPFQ96A32 169 aa2.91□□□□□ -1.94
USP48-215ENST00000534705 ELSPBP1Q96BH3 223 aa2.91□□□□□ -1.94
USP48-215ENST00000534705 PCED1BQ96HM7 432 aa2.91□□□□□ -1.94
USP48-215ENST00000534705 CDKN2AIPNLQ96HQ2 116 aa2.91□□□□□ -1.94
USP48-215ENST00000534705 NKX3-1Q99801 234 aaPredicted RBP2.91□□□□□ -1.94
USP48-215ENST00000534705 DCTN5Q9BTE1 182 aa2.91□□□□□ -1.94
USP48-215ENST00000534705 SHCBP1LQ9BZQ2 653 aa2.91□□□□□ -1.94
USP48-215ENST00000534705 ELOVL4Q9GZR5 314 aa2.91□□□□□ -1.94
USP48-215ENST00000534705 HOXD1Q9GZZ0 328 aa2.91□□□□□ -1.94
USP48-215ENST00000534705 STMN4Q9H169 189 aaPredicted RBP2.91□□□□□ -1.94
USP48-215ENST00000534705 EHD1Q9H4M9 534 aa2.91□□□□□ -1.94
USP48-215ENST00000534705 FANCEQ9HB96 536 aa2.91□□□□□ -1.94
USP48-215ENST00000534705 CDH20Q9HBT6 801 aa2.91□□□□□ -1.94
USP48-215ENST00000534705 CSNK1G1Q9HCP0 422 aa2.91□□□□□ -1.94
USP48-215ENST00000534705 PNPLA3Q9NST1 481 aa2.91□□□□□ -1.94
USP48-215ENST00000534705 TAS2R1Q9NYW7 299 aa2.91□□□□□ -1.94
USP48-215ENST00000534705 GCNT4Q9P109 453 aa2.91□□□□□ -1.94
USP48-215ENST00000534705 MTRF1LQ9UGC7 380 aaKnown RBP2.91□□□□□ -1.94
USP48-215ENST00000534705 UBQLN2Q9UHD9 624 aa2.91□□□□□ -1.94
USP48-215ENST00000534705 DNAJC12Q9UKB3 198 aa2.91□□□□□ -1.94
USP48-215ENST00000534705 CDH9Q9ULB4 789 aa2.91□□□□□ -1.94
USP48-215ENST00000534705 TFR2Q9UP52 801 aa2.91□□□□□ -1.94
USP48-215ENST00000534705 CCL26Q9Y258 94 aa2.91□□□□□ -1.94
USP48-215ENST00000534705 CNOT1A5YKK6 2376 aaKnown RBP2.91□□□□□ -1.94
USP48-215ENST00000534705 ZFHX2Q9C0A1 2572 aaPredicted RBP2.91□□□□□ -1.94
USP48-215ENST00000534705 GPR179Q6PRD1 2367 aa2.9□□□□□ -1.94
USP48-215ENST00000534705 A0A0A6YYC8 382 aaPredicted RBP2.9□□□□□ -1.95
USP48-215ENST00000534705 C15orf38-AP3S2A0A0A6YYH1 394 aa2.9□□□□□ -1.95
USP48-215ENST00000534705 A0A0B4J203 849 aa2.9□□□□□ -1.95
USP48-215ENST00000534705 TMEM120BA0PK00 339 aa2.9□□□□□ -1.95
USP48-215ENST00000534705 MEX3AA1L020 520 aaKnown RBP2.9□□□□□ -1.95
USP48-215ENST00000534705 C5orf51A6NDU8 294 aa2.9□□□□□ -1.95
USP48-215ENST00000534705 F8VP50 259 aa2.9□□□□□ -1.95
USP48-215ENST00000534705 I3L1I5 382 aaPredicted RBP2.9□□□□□ -1.95
USP48-215ENST00000534705 M0QX08 132 aa2.9□□□□□ -1.95
USP48-215ENST00000534705 ZNF195O14628 629 aa2.9□□□□□ -1.95
USP48-215ENST00000534705 SLC9A3R1O14745 358 aaPredicted RBP2.9□□□□□ -1.95
USP48-215ENST00000534705 PTBP3O95758 552 aaKnown RBP2.9□□□□□ -1.95
USP48-215ENST00000534705 CRYZL1O95825 349 aa2.9□□□□□ -1.95
USP48-215ENST00000534705 CLDN1O95832 211 aa2.9□□□□□ -1.95
USP48-215ENST00000534705 TDGF1P13385 188 aa2.9□□□□□ -1.95
USP48-215ENST00000534705 CCDC130P13994 396 aa2.9□□□□□ -1.95
USP48-215ENST00000534705 PSMC3P17980 439 aa2.9□□□□□ -1.95
USP48-215ENST00000534705 ZNF10P21506 573 aaPredicted RBP2.9□□□□□ -1.95
USP48-215ENST00000534705 HNRNPA2B1P22626 353 aaKnown RBP2.9□□□□□ -1.95
USP48-215ENST00000534705 ANXA13P27216 316 aa2.9□□□□□ -1.95
USP48-215ENST00000534705 FDFT1P37268 417 aa2.9□□□□□ -1.95
USP48-215ENST00000534705 MMP12P39900 470 aa2.9□□□□□ -1.95
USP48-215ENST00000534705 CBX5P45973 191 aa2.9□□□□□ -1.95
USP48-215ENST00000534705 TUFMP49411 452 aaKnown RBP2.9□□□□□ -1.95
USP48-215ENST00000534705 NDST1P52848 882 aa2.9□□□□□ -1.95
USP48-215ENST00000534705 CLDN15P56746 228 aa2.9□□□□□ -1.95
USP48-215ENST00000534705 STX17P56962 302 aa2.9□□□□□ -1.95
USP48-215ENST00000534705 DSTNP60981 165 aa2.9□□□□□ -1.95
USP48-215ENST00000534705 SRP54P61011 504 aaKnown RBP2.9□□□□□ -1.95
USP48-215ENST00000534705 FKBP3Q00688 224 aaKnown RBP2.9□□□□□ -1.95
USP48-215ENST00000534705 MYBPC1Q00872 1141 aa2.9□□□□□ -1.95
USP48-215ENST00000534705 SPIBQ01892 262 aa2.9□□□□□ -1.95
USP48-215ENST00000534705 FOLH1Q04609 750 aa2.9□□□□□ -1.95
USP48-215ENST00000534705 CDC20Q12834 499 aa2.9□□□□□ -1.95
USP48-215ENST00000534705 TNK1Q13470 666 aa2.9□□□□□ -1.95
USP48-215ENST00000534705 MED21Q13503 144 aa2.9□□□□□ -1.95
USP48-215ENST00000534705 DDX39BQ13838 428 aaKnown RBP2.9□□□□□ -1.95
USP48-215ENST00000534705 PDK3Q15120 406 aa2.9□□□□□ -1.95
USP48-215ENST00000534705 CYTH1Q15438 398 aa2.9□□□□□ -1.95
USP48-215ENST00000534705 MLF2Q15773 248 aaPredicted RBP2.9□□□□□ -1.95
USP48-215ENST00000534705 ZNF77Q15935 545 aa2.9□□□□□ -1.95
USP48-215ENST00000534705 ZNF74Q16587 644 aa2.9□□□□□ -1.95
USP48-215ENST00000534705 MOGQ16653 247 aa2.9□□□□□ -1.95
USP48-215ENST00000534705 DUSP7Q16829 419 aa2.9□□□□□ -1.95
USP48-215ENST00000534705 RGS21Q2M5E4 152 aa2.9□□□□□ -1.95
USP48-215ENST00000534705 KLHL38Q2WGJ6 581 aa2.9□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms