RNA–Protein interactions for RNA: ENST00000533533.5

COPB1-210, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-210ENST00000533533 VRK2Q86Y07 508 aa7.8□□□□□ -1.16
COPB1-210ENST00000533533 POU5F2Q8N7G0 328 aa7.8□□□□□ -1.16
COPB1-210ENST00000533533 CNEP1R1Q8N9A8 125 aa7.8□□□□□ -1.16
COPB1-210ENST00000533533 OR52P1PQ8NH57 321 aa7.8□□□□□ -1.16
COPB1-210ENST00000533533 OR5W2Q8NH69 310 aa7.8□□□□□ -1.16
COPB1-210ENST00000533533 NFKBIDQ8NI38 313 aa7.8□□□□□ -1.16
COPB1-210ENST00000533533 TSPEARQ8WU66 669 aa7.8□□□□□ -1.16
COPB1-210ENST00000533533 SLC38A5Q8WUX1 472 aa7.8□□□□□ -1.16
COPB1-210ENST00000533533 ZBTB8AQ96BR9 441 aa7.8□□□□□ -1.16
COPB1-210ENST00000533533 RNF145Q96MT1 663 aa7.8□□□□□ -1.16
COPB1-210ENST00000533533 CGREF1Q99674 301 aa7.8□□□□□ -1.16
COPB1-210ENST00000533533 KLHDC3Q9BQ90 382 aa7.8□□□□□ -1.16
COPB1-210ENST00000533533 SLC39A3Q9BRY0 314 aa7.8□□□□□ -1.16
COPB1-210ENST00000533533 GSX2Q9BZM3 304 aa7.8□□□□□ -1.16
COPB1-210ENST00000533533 PIF1Q9H611 641 aa7.8□□□□□ -1.16
COPB1-210ENST00000533533 MTHFD2LQ9H903 347 aaPredicted RBP7.8□□□□□ -1.16
COPB1-210ENST00000533533 ELOVL5Q9NYP7 299 aa7.8□□□□□ -1.16
COPB1-210ENST00000533533 STOML1Q9UBI4 398 aa7.8□□□□□ -1.16
COPB1-210ENST00000533533 ZNF232Q9UNY5 417 aa7.8□□□□□ -1.16
COPB1-210ENST00000533533 SLC35A3Q9Y2D2 325 aa7.8□□□□□ -1.16
COPB1-210ENST00000533533 CR1P17927 2039 aa7.79□□□□□ -1.16
COPB1-210ENST00000533533 A0A0G2JPF8 293 aa7.79□□□□□ -1.16
COPB1-210ENST00000533533 SLC22A20A6NK97 555 aa7.79□□□□□ -1.16
COPB1-210ENST00000533533 BBIP1A8MTZ0 92 aa7.79□□□□□ -1.16
COPB1-210ENST00000533533 HNRNPCL2B2RXH8 293 aa7.79□□□□□ -1.16
COPB1-210ENST00000533533 HNRNPCL3B7ZW38 293 aa7.79□□□□□ -1.16
COPB1-210ENST00000533533 H0YC42 278 aa7.79□□□□□ -1.16
COPB1-210ENST00000533533 C16orf97H3BN30 126 aa7.79□□□□□ -1.16
COPB1-210ENST00000533533 EIF1AYO14602 144 aaKnown RBP7.79□□□□□ -1.16
COPB1-210ENST00000533533 HNRNPCL1O60812 293 aaKnown RBP7.79□□□□□ -1.16
COPB1-210ENST00000533533 CNOT4O95628 575 aaKnown RBP7.79□□□□□ -1.16
COPB1-210ENST00000533533 TFPTP0C1Z6 253 aa7.79□□□□□ -1.16
COPB1-210ENST00000533533 LINGO3P0C6S8 592 aa7.79□□□□□ -1.16
COPB1-210ENST00000533533 HNRNPCL4P0DMR1 293 aa7.79□□□□□ -1.16
COPB1-210ENST00000533533 POU2F1P14859 743 aa7.79□□□□□ -1.16
COPB1-210ENST00000533533 HOXB9P17482 250 aaPredicted RBP7.79□□□□□ -1.16
COPB1-210ENST00000533533 PGCP20142 388 aa7.79□□□□□ -1.16
COPB1-210ENST00000533533 SLC6A2P23975 617 aa7.79□□□□□ -1.16
COPB1-210ENST00000533533 LOXP28300 417 aaPredicted RBP7.79□□□□□ -1.16
COPB1-210ENST00000533533 AQP1P29972 269 aa7.79□□□□□ -1.16
COPB1-210ENST00000533533 CCKARP32238 428 aa7.79□□□□□ -1.16
COPB1-210ENST00000533533 SFTPDP35247 375 aa7.79□□□□□ -1.16
COPB1-210ENST00000533533 EIF1P41567 113 aaKnown RBP7.79□□□□□ -1.16
COPB1-210ENST00000533533 KIR2DL2P43627 348 aaPredicted RBP7.79□□□□□ -1.16
COPB1-210ENST00000533533 EIF1AXP47813 144 aaKnown RBP7.79□□□□□ -1.16
COPB1-210ENST00000533533 TPD52P55327 224 aaPredicted RBP7.79□□□□□ -1.16
COPB1-210ENST00000533533 SUMO3P55854 103 aaPredicted RBP7.79□□□□□ -1.16
COPB1-210ENST00000533533 CLDN20P56880 219 aa7.79□□□□□ -1.16
COPB1-210ENST00000533533 EEFSECP57772 596 aaKnown RBP7.79□□□□□ -1.16
COPB1-210ENST00000533533 RPS3AP61247 264 aaKnown RBP7.79□□□□□ -1.16
COPB1-210ENST00000533533 CDK6Q00534 326 aa7.79□□□□□ -1.16
COPB1-210ENST00000533533 SCARB2Q14108 478 aa7.79□□□□□ -1.16
COPB1-210ENST00000533533 SELPLGQ14242 412 aa7.79□□□□□ -1.16
COPB1-210ENST00000533533 LARS2Q15031 903 aaKnown RBP7.79□□□□□ -1.16
COPB1-210ENST00000533533 QPRTQ15274 297 aa7.79□□□□□ -1.16
COPB1-210ENST00000533533 TOMM34Q15785 309 aaPredicted RBP7.79□□□□□ -1.16
COPB1-210ENST00000533533 TRMT5Q32P41 509 aaKnown RBP7.79□□□□□ -1.16
COPB1-210ENST00000533533 GLYR1Q49A26 553 aaPredicted RBP7.79□□□□□ -1.16
COPB1-210ENST00000533533 LIN52Q52LA3 116 aa7.79□□□□□ -1.16
COPB1-210ENST00000533533 RUNDC3AQ59EK9 446 aa7.79□□□□□ -1.16
COPB1-210ENST00000533533 MRPL2Q5T653 305 aaKnown RBP7.79□□□□□ -1.16
COPB1-210ENST00000533533 DLEU7Q6UYE1 221 aa7.79□□□□□ -1.16
COPB1-210ENST00000533533 KRT73Q86Y46 540 aa7.79□□□□□ -1.16
COPB1-210ENST00000533533 DPP10Q8N608 796 aa7.79□□□□□ -1.16
COPB1-210ENST00000533533 PCYOX1LQ8NBM8 494 aa7.79□□□□□ -1.16
COPB1-210ENST00000533533 FBXO27Q8NI29 283 aa7.79□□□□□ -1.16
COPB1-210ENST00000533533 BBS10Q8TAM1 723 aa7.79□□□□□ -1.16
COPB1-210ENST00000533533 GPR119Q8TDV5 335 aa7.79□□□□□ -1.16
COPB1-210ENST00000533533 CNOT9Q92600 299 aaKnown RBP7.79□□□□□ -1.16
COPB1-210ENST00000533533 ANKRD27Q96NW4 1050 aa7.79□□□□□ -1.16
COPB1-210ENST00000533533 NPAS1Q99742 590 aa7.79□□□□□ -1.16
COPB1-210ENST00000533533 CPPED1Q9BRF8 314 aaPredicted RBP7.79□□□□□ -1.16
COPB1-210ENST00000533533 REPIN1Q9BWE0 567 aaKnown RBP7.79□□□□□ -1.16
COPB1-210ENST00000533533 PINK1Q9BXM7 581 aa7.79□□□□□ -1.16
COPB1-210ENST00000533533 PRRG4Q9BZD6 226 aa7.79□□□□□ -1.16
COPB1-210ENST00000533533 LAT2Q9GZY6 243 aa7.79□□□□□ -1.16
COPB1-210ENST00000533533 SAP130Q9H0E3 1048 aa7.79□□□□□ -1.16
COPB1-210ENST00000533533 OPN3Q9H1Y3 402 aaPredicted RBP7.79□□□□□ -1.16
COPB1-210ENST00000533533 IKZF5Q9H5V7 419 aa7.79□□□□□ -1.16
COPB1-210ENST00000533533 A4GALTQ9NPC4 353 aa7.79□□□□□ -1.16
COPB1-210ENST00000533533 GID8Q9NWU2 228 aa7.79□□□□□ -1.16
COPB1-210ENST00000533533 ADAM21Q9UKJ8 722 aa7.79□□□□□ -1.16
COPB1-210ENST00000533533 ICAM5Q9UMF0 924 aa7.79□□□□□ -1.16
COPB1-210ENST00000533533 AP4B1Q9Y6B7 739 aa7.79□□□□□ -1.16
COPB1-210ENST00000533533 TRBV5-3A0A0A0MS03 114 aa7.78□□□□□ -1.16
COPB1-210ENST00000533533 AGAP5A6NIR3 686 aa7.78□□□□□ -1.16
COPB1-210ENST00000533533 LINC01387J3KSC0 135 aa7.78□□□□□ -1.16
COPB1-210ENST00000533533 FBP2O00757 339 aa7.78□□□□□ -1.16
COPB1-210ENST00000533533 TNFSF11O14788 317 aa7.78□□□□□ -1.16
COPB1-210ENST00000533533 AIM2O14862 343 aa7.78□□□□□ -1.16
COPB1-210ENST00000533533 SNX3O60493 162 aa7.78□□□□□ -1.16
COPB1-210ENST00000533533 BCAS1O75363 584 aaPredicted RBP7.78□□□□□ -1.16
COPB1-210ENST00000533533 PGM3O95394 542 aa7.78□□□□□ -1.16
COPB1-210ENST00000533533 CGAP01215 116 aa7.78□□□□□ -1.16
COPB1-210ENST00000533533 GUSBP08236 651 aa7.78□□□□□ -1.16
COPB1-210ENST00000533533 ARAFP10398 606 aa7.78□□□□□ -1.16
COPB1-210ENST00000533533 COX4I1P13073 169 aa7.78□□□□□ -1.16
COPB1-210ENST00000533533 NID1P14543 1247 aa7.78□□□□□ -1.16
COPB1-210ENST00000533533 UQCRBP14927 111 aa7.78□□□□□ -1.16
COPB1-210ENST00000533533 ZNF17P17021 662 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms