RNA–Protein interactions for RNA: ENST00000532602.1

PCDHA9-202, Transcript of protocadherin alpha 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA9, Length 6,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9-202ENST00000532602 MAOAP21397 527 aa13.77□□□□□ -0.2
PCDHA9-202ENST00000532602 PTH2RP49190 550 aa13.77□□□□□ -0.2
PCDHA9-202ENST00000532602 SLC35A1P78382 337 aa13.77□□□□□ -0.2
PCDHA9-202ENST00000532602 CAMK2DQ13557 499 aa13.77□□□□□ -0.2
PCDHA9-202ENST00000532602 OR1Q1Q15612 314 aa13.77□□□□□ -0.2
PCDHA9-202ENST00000532602 TMEM176BQ3YBM2 270 aaPredicted RBP13.77□□□□□ -0.2
PCDHA9-202ENST00000532602 AAED1Q7RTV5 226 aa13.77□□□□□ -0.2
PCDHA9-202ENST00000532602 MAFAQ8NHW3 353 aaPredicted RBP13.77□□□□□ -0.2
PCDHA9-202ENST00000532602 NT5C3BQ969T7 300 aa13.77□□□□□ -0.2
PCDHA9-202ENST00000532602 TMEM181Q9P2C4 612 aa13.77□□□□□ -0.2
PCDHA9-202ENST00000532602 ASB4Q9Y574 426 aa13.77□□□□□ -0.2
PCDHA9-202ENST00000532602 KIAA1551Q9HCM1 1747 aa13.77□□□□□ -0.2
PCDHA9-202ENST00000532602 HOXC11O43248 304 aaPredicted RBP13.77□□□□□ -0.2
PCDHA9-202ENST00000532602 ITGB2P05107 769 aa13.77□□□□□ -0.2
PCDHA9-202ENST00000532602 BCL2A1Q16548 175 aa13.77□□□□□ -0.2
PCDHA9-202ENST00000532602 CGB2Q6NT52 195 aa13.77□□□□□ -0.2
PCDHA9-202ENST00000532602 ZADH2Q8N4Q0 377 aa13.77□□□□□ -0.2
PCDHA9-202ENST00000532602 SDHAF2Q9NX18 166 aa13.77□□□□□ -0.2
PCDHA9-202ENST00000532602 ZNF223Q9UK11 482 aaPredicted RBP13.77□□□□□ -0.2
PCDHA9-202ENST00000532602 ARAP2Q8WZ64 1704 aa13.77□□□□□ -0.21
PCDHA9-202ENST00000532602 TCRBV5S1A1TA0A578 114 aa13.77□□□□□ -0.21
PCDHA9-202ENST00000532602 KIAA1024LP59773 190 aa13.77□□□□□ -0.21
PCDHA9-202ENST00000532602 SSC5DA1L4H1 1573 aa13.77□□□□□ -0.21
PCDHA9-202ENST00000532602 GPR171O14626 319 aa13.77□□□□□ -0.21
PCDHA9-202ENST00000532602 TAPBPO15533 448 aa13.77□□□□□ -0.21
PCDHA9-202ENST00000532602 NUDT7P0C024 238 aa13.77□□□□□ -0.21
PCDHA9-202ENST00000532602 ZNF169Q14929 603 aaPredicted RBP13.77□□□□□ -0.21
PCDHA9-202ENST00000532602 PLCXD3Q63HM9 321 aa13.77□□□□□ -0.21
PCDHA9-202ENST00000532602 PLAG1Q6DJT9 500 aa13.77□□□□□ -0.21
PCDHA9-202ENST00000532602 ZNF322Q6U7Q0 402 aaPredicted RBP13.77□□□□□ -0.21
PCDHA9-202ENST00000532602 KCTD20Q7Z5Y7 419 aa13.77□□□□□ -0.21
PCDHA9-202ENST00000532602 RNF113BQ8IZP6 322 aaKnown RBP13.77□□□□□ -0.21
PCDHA9-202ENST00000532602 OR4K15Q8NH41 348 aa13.77□□□□□ -0.21
PCDHA9-202ENST00000532602 PBDC1Q9BVG4 233 aa13.77□□□□□ -0.21
PCDHA9-202ENST00000532602 THSD1Q9NS62 852 aa13.77□□□□□ -0.21
PCDHA9-202ENST00000532602 NAP1L6A6NFF2 107 aa13.77□□□□□ -0.21
PCDHA9-202ENST00000532602 B4DXG7 233 aa13.77□□□□□ -0.21
PCDHA9-202ENST00000532602 TRAPPC2LH3BP13 241 aa13.77□□□□□ -0.21
PCDHA9-202ENST00000532602 PSMB10P40306 273 aa13.77□□□□□ -0.21
PCDHA9-202ENST00000532602 EIF1P41567 113 aaKnown RBP13.77□□□□□ -0.21
PCDHA9-202ENST00000532602 RGS6P49758 472 aa13.77□□□□□ -0.21
PCDHA9-202ENST00000532602 EFNA3P52797 238 aa13.77□□□□□ -0.21
PCDHA9-202ENST00000532602 C17orf67Q0P5P2 114 aa13.77□□□□□ -0.21
PCDHA9-202ENST00000532602 CCDC58Q4VC31 144 aa13.77□□□□□ -0.21
PCDHA9-202ENST00000532602 GDPD1Q8N9F7 314 aa13.77□□□□□ -0.21
PCDHA9-202ENST00000532602 SLC46A1Q96NT5 459 aa13.77□□□□□ -0.21
PCDHA9-202ENST00000532602 PHB2Q99623 299 aa13.77□□□□□ -0.21
PCDHA9-202ENST00000532602 SAP130Q9H0E3 1048 aa13.77□□□□□ -0.21
PCDHA9-202ENST00000532602 CD40LGP29965 261 aa13.76□□□□□ -0.21
PCDHA9-202ENST00000532602 ESCO2Q56NI9 601 aa13.76□□□□□ -0.21
PCDHA9-202ENST00000532602 S100A7AQ86SG5 101 aa13.76□□□□□ -0.21
PCDHA9-202ENST00000532602 OR1E3Q8WZA6 343 aa13.76□□□□□ -0.21
PCDHA9-202ENST00000532602 FUNDC2Q9BWH2 189 aa13.76□□□□□ -0.21
PCDHA9-202ENST00000532602 EDARQ9UNE0 448 aa13.76□□□□□ -0.21
PCDHA9-202ENST00000532602 IGHV3-20A0A0C4DH32 117 aa13.76□□□□□ -0.21
PCDHA9-202ENST00000532602 CSF1P09603 554 aa13.76□□□□□ -0.21
PCDHA9-202ENST00000532602 ATF4P18848 351 aaPredicted RBP13.76□□□□□ -0.21
PCDHA9-202ENST00000532602 FXYD4P59646 89 aa13.76□□□□□ -0.21
PCDHA9-202ENST00000532602 GPR157Q5UAW9 335 aa13.76□□□□□ -0.21
PCDHA9-202ENST00000532602 NIPAL3Q6P499 406 aa13.76□□□□□ -0.21
PCDHA9-202ENST00000532602 STEAP2Q8NFT2 490 aa13.76□□□□□ -0.21
PCDHA9-202ENST00000532602 VN1R3Q9BXE9 311 aa13.76□□□□□ -0.21
PCDHA9-202ENST00000532602 ARL6Q9H0F7 186 aa13.76□□□□□ -0.21
PCDHA9-202ENST00000532602 NXF5Q9H1B4 397 aaKnown RBP13.76□□□□□ -0.21
PCDHA9-202ENST00000532602 TMEM269A0A1B0GVZ9 245 aa13.76□□□□□ -0.21
PCDHA9-202ENST00000532602 OR8U9P0C7N5 309 aa13.76□□□□□ -0.21
PCDHA9-202ENST00000532602 BCL6P41182 706 aa13.76□□□□□ -0.21
PCDHA9-202ENST00000532602 TSFMP43897 325 aaKnown RBP13.76□□□□□ -0.21
PCDHA9-202ENST00000532602 CHDHQ8NE62 594 aaPredicted RBP13.76□□□□□ -0.21
PCDHA9-202ENST00000532602 RNF128Q8TEB7 428 aa13.76□□□□□ -0.21
PCDHA9-202ENST00000532602 TAS2R3Q9NYW6 316 aa13.76□□□□□ -0.21
PCDHA9-202ENST00000532602 VSX1Q9NZR4 365 aaPredicted RBP13.76□□□□□ -0.21
PCDHA9-202ENST00000532602 LHX6Q9UPM6 363 aa13.76□□□□□ -0.21
PCDHA9-202ENST00000532602 MRPS2Q9Y399 296 aaKnown RBP13.76□□□□□ -0.21
PCDHA9-202ENST00000532602 GON4LQ3T8J9 2241 aa13.76□□□□□ -0.21
PCDHA9-202ENST00000532602 TVP23AA6NH52 213 aa13.76□□□□□ -0.21
PCDHA9-202ENST00000532602 ZNF749O43361 778 aa13.76□□□□□ -0.21
PCDHA9-202ENST00000532602 EIF1BO60739 113 aaKnown RBP13.76□□□□□ -0.21
PCDHA9-202ENST00000532602 TP53P04637 393 aaPredicted RBP13.76□□□□□ -0.21
PCDHA9-202ENST00000532602 MYF5P13349 255 aa13.76□□□□□ -0.21
PCDHA9-202ENST00000532602 C14orf28Q4W4Y0 310 aa13.76□□□□□ -0.21
PCDHA9-202ENST00000532602 LSM14AQ8ND56 463 aaKnown RBP13.76□□□□□ -0.21
PCDHA9-202ENST00000532602 LCORQ96JN0 433 aaPredicted RBP13.76□□□□□ -0.21
PCDHA9-202ENST00000532602 CENPOQ9BU64 300 aa13.76□□□□□ -0.21
PCDHA9-202ENST00000532602 UNKLQ9H9P5 680 aaKnown RBP13.76□□□□□ -0.21
PCDHA9-202ENST00000532602 GABBR2O75899 941 aa13.76□□□□□ -0.21
PCDHA9-202ENST00000532602 DBHP09172 617 aa13.76□□□□□ -0.21
PCDHA9-202ENST00000532602 FBXO45P0C2W1 286 aa13.76□□□□□ -0.21
PCDHA9-202ENST00000532602 TUBG1P23258 451 aa13.76□□□□□ -0.21
PCDHA9-202ENST00000532602 PKLRP30613 574 aa13.76□□□□□ -0.21
PCDHA9-202ENST00000532602 EXT1Q16394 746 aa13.76□□□□□ -0.21
PCDHA9-202ENST00000532602 PGGHGQ32M88 737 aa13.76□□□□□ -0.21
PCDHA9-202ENST00000532602 CBLL1Q75N03 491 aa13.76□□□□□ -0.21
PCDHA9-202ENST00000532602 PIGQQ9BRB3 760 aa13.76□□□□□ -0.21
PCDHA9-202ENST00000532602 MMP17Q9ULZ9 603 aa13.76□□□□□ -0.21
PCDHA9-202ENST00000532602 A0A0A6YYH2 397 aa13.75□□□□□ -0.21
PCDHA9-202ENST00000532602 A6NJ64 397 aa13.75□□□□□ -0.21
PCDHA9-202ENST00000532602 HCRTR1O43613 425 aa13.75□□□□□ -0.21
PCDHA9-202ENST00000532602 ARAFP10398 606 aa13.75□□□□□ -0.21
PCDHA9-202ENST00000532602 REEP5Q00765 189 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms