RNA–Protein interactions for RNA: ENST00000531118.5

CD44-232, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 877 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-232ENST00000531118 LEG1Q6P5S2 330 aa7.08□□□□□ -1.28
CD44-232ENST00000531118 GALNT18Q6P9A2 607 aa7.08□□□□□ -1.28
CD44-232ENST00000531118 RBMS3Q6XE24 437 aaKnown RBP7.08□□□□□ -1.28
CD44-232ENST00000531118 Q6ZPA2 131 aa7.08□□□□□ -1.28
CD44-232ENST00000531118 RAPH1Q70E73 1250 aa7.08□□□□□ -1.28
CD44-232ENST00000531118 SPATA21Q7Z572 469 aa7.08□□□□□ -1.28
CD44-232ENST00000531118 CENPLQ8N0S6 344 aaPredicted RBP7.08□□□□□ -1.28
CD44-232ENST00000531118 FBXO36Q8NEA4 188 aa7.08□□□□□ -1.28
CD44-232ENST00000531118 NUP37Q8NFH4 326 aa7.08□□□□□ -1.28
CD44-232ENST00000531118 RHEBL1Q8TAI7 183 aa7.08□□□□□ -1.28
CD44-232ENST00000531118 NANPQ8TBE9 248 aa7.08□□□□□ -1.28
CD44-232ENST00000531118 SELENOMQ8WWX9 145 aa7.08□□□□□ -1.28
CD44-232ENST00000531118 DVL3Q92997 716 aaPredicted RBP7.08□□□□□ -1.28
CD44-232ENST00000531118 UBE2FQ969M7 185 aa7.08□□□□□ -1.28
CD44-232ENST00000531118 ATP6V1E2Q96A05 226 aa7.08□□□□□ -1.28
CD44-232ENST00000531118 OR5B2Q96R09 309 aa7.08□□□□□ -1.28
CD44-232ENST00000531118 DOK1Q99704 481 aa7.08□□□□□ -1.28
CD44-232ENST00000531118 WNT10AQ9GZT5 417 aa7.08□□□□□ -1.28
CD44-232ENST00000531118 ZNF442Q9H7R0 627 aa7.08□□□□□ -1.28
CD44-232ENST00000531118 SEC61A2Q9H9S3 476 aa7.08□□□□□ -1.28
CD44-232ENST00000531118 BRF2Q9HAW0 419 aa7.08□□□□□ -1.28
CD44-232ENST00000531118 SSU72Q9NP77 194 aaKnown RBP7.08□□□□□ -1.28
CD44-232ENST00000531118 GNG14A0A1W2PPG7 69 aa7.07□□□□□ -1.28
CD44-232ENST00000531118 PRAMEF27A3QJZ7 478 aa7.07□□□□□ -1.28
CD44-232ENST00000531118 GOLGA6L6A8MZA4 724 aa7.07□□□□□ -1.28
CD44-232ENST00000531118 ETV2O00321 342 aaPredicted RBP7.07□□□□□ -1.28
CD44-232ENST00000531118 KLF11O14901 512 aa7.07□□□□□ -1.28
CD44-232ENST00000531118 CRYAAP02489 173 aa7.07□□□□□ -1.28
CD44-232ENST00000531118 CECR9P0C854 216 aa7.07□□□□□ -1.28
CD44-232ENST00000531118 HPGDP15428 266 aa7.07□□□□□ -1.28
CD44-232ENST00000531118 ACHEP22303 614 aa7.07□□□□□ -1.28
CD44-232ENST00000531118 FPR2P25090 351 aa7.07□□□□□ -1.28
CD44-232ENST00000531118 TYK2P29597 1187 aa7.07□□□□□ -1.28
CD44-232ENST00000531118 DIO1P49895 249 aa7.07□□□□□ -1.28
CD44-232ENST00000531118 P2RX1P51575 399 aa7.07□□□□□ -1.28
CD44-232ENST00000531118 ARL4CP56559 192 aa7.07□□□□□ -1.28
CD44-232ENST00000531118 RAE1P78406 368 aaKnown RBP7.07□□□□□ -1.28
CD44-232ENST00000531118 NAAAQ02083 359 aa7.07□□□□□ -1.28
CD44-232ENST00000531118 POU3F1Q03052 451 aaPredicted RBP7.07□□□□□ -1.28
CD44-232ENST00000531118 MPP2Q14168 576 aa7.07□□□□□ -1.28
CD44-232ENST00000531118 HEPACAMQ14CZ8 416 aa7.07□□□□□ -1.28
CD44-232ENST00000531118 PRSS53Q2L4Q9 553 aa7.07□□□□□ -1.28
CD44-232ENST00000531118 HIKESHIQ53FT3 197 aa7.07□□□□□ -1.28
CD44-232ENST00000531118 METTL2BQ6P1Q9 378 aaKnown RBP7.07□□□□□ -1.28
CD44-232ENST00000531118 CBLN3Q6UW01 205 aa7.07□□□□□ -1.28
CD44-232ENST00000531118 RHOUQ7L0Q8 258 aa7.07□□□□□ -1.28
CD44-232ENST00000531118 PTGR2Q8N8N7 351 aaPredicted RBP7.07□□□□□ -1.28
CD44-232ENST00000531118 SYT14Q8NB59 555 aa7.07□□□□□ -1.28
CD44-232ENST00000531118 OR4F6Q8NGB9 312 aa7.07□□□□□ -1.28
CD44-232ENST00000531118 GPR151Q8TDV0 419 aa7.07□□□□□ -1.28
CD44-232ENST00000531118 CKAP2Q8WWK9 683 aa7.07□□□□□ -1.28
CD44-232ENST00000531118 HOXB13Q92826 284 aaPredicted RBP7.07□□□□□ -1.28
CD44-232ENST00000531118 ZNF524Q96C55 264 aa7.07□□□□□ -1.28
CD44-232ENST00000531118 MS4A14Q96JA4 679 aa7.07□□□□□ -1.28
CD44-232ENST00000531118 CPNE1Q99829 537 aa7.07□□□□□ -1.28
CD44-232ENST00000531118 EBPLQ9BY08 206 aa7.07□□□□□ -1.28
CD44-232ENST00000531118 ZNF665Q9H7R5 613 aa7.07□□□□□ -1.28
CD44-232ENST00000531118 OBP2BQ9NPH6 170 aa7.07□□□□□ -1.28
CD44-232ENST00000531118 SLC7A10Q9NS82 523 aa7.07□□□□□ -1.28
CD44-232ENST00000531118 ZNF275Q9NSD4 429 aaPredicted RBP7.07□□□□□ -1.28
CD44-232ENST00000531118 CPSF2Q9P2I0 782 aaKnown RBP7.07□□□□□ -1.28
CD44-232ENST00000531118 TXNDC16Q9P2K2 825 aa7.07□□□□□ -1.28
CD44-232ENST00000531118 OPN4Q9UHM6 478 aa7.07□□□□□ -1.28
CD44-232ENST00000531118 PCTPQ9UKL6 214 aa7.07□□□□□ -1.28
CD44-232ENST00000531118 ICAM5Q9UMF0 924 aa7.07□□□□□ -1.28
CD44-232ENST00000531118 TNPO3Q9Y5L0 923 aaKnown RBP7.07□□□□□ -1.28
CD44-232ENST00000531118 MMP24Q9Y5R2 645 aa7.07□□□□□ -1.28
CD44-232ENST00000531118 TENM3Q9P273 2699 aa7.07□□□□□ -1.28
CD44-232ENST00000531118 PLXNB1O43157 2135 aa7.06□□□□□ -1.28
CD44-232ENST00000531118 TMEM129A0AVI4 362 aa7.06□□□□□ -1.28
CD44-232ENST00000531118 GPR171O14626 319 aa7.06□□□□□ -1.28
CD44-232ENST00000531118 MRPL33O75394 65 aaKnown RBP7.06□□□□□ -1.28
CD44-232ENST00000531118 KCNK2O95069 426 aa7.06□□□□□ -1.28
CD44-232ENST00000531118 MPZL1O95297 269 aa7.06□□□□□ -1.28
CD44-232ENST00000531118 HPXP02790 462 aa7.06□□□□□ -1.28
CD44-232ENST00000531118 ADRA2AP08913 450 aa7.06□□□□□ -1.28
CD44-232ENST00000531118 IFI6P09912 130 aa7.06□□□□□ -1.28
CD44-232ENST00000531118 ACP2P11117 423 aa7.06□□□□□ -1.28
CD44-232ENST00000531118 NPR2P20594 1047 aa7.06□□□□□ -1.28
CD44-232ENST00000531118 DDCP20711 480 aa7.06□□□□□ -1.28
CD44-232ENST00000531118 IVDP26440 423 aa7.06□□□□□ -1.28
CD44-232ENST00000531118 MPGP29372 298 aa7.06□□□□□ -1.28
CD44-232ENST00000531118 LCN1P31025 176 aa7.06□□□□□ -1.28
CD44-232ENST00000531118 TIA1P31483 386 aaKnown RBP eCLIP7.06□□□□□ -1.28
CD44-232ENST00000531118 THBS4P35443 961 aa7.06□□□□□ -1.28
CD44-232ENST00000531118 MAP3K8P41279 467 aa7.06□□□□□ -1.28
CD44-232ENST00000531118 SLC16A1P53985 500 aa7.06□□□□□ -1.28
CD44-232ENST00000531118 CSNK2A1P68400 391 aaPredicted RBP7.06□□□□□ -1.28
CD44-232ENST00000531118 MYBPC1Q00872 1141 aa7.06□□□□□ -1.28
CD44-232ENST00000531118 TGFBR3Q03167 851 aa7.06□□□□□ -1.28
CD44-232ENST00000531118 PDIA2Q13087 525 aaKnown RBP7.06□□□□□ -1.28
CD44-232ENST00000531118 BAMBIQ13145 260 aa7.06□□□□□ -1.28
CD44-232ENST00000531118 NDUFAF6Q330K2 333 aa7.06□□□□□ -1.28
CD44-232ENST00000531118 VPS26BQ4G0F5 336 aa7.06□□□□□ -1.28
CD44-232ENST00000531118 SLC9B1Q4ZJI4 515 aa7.06□□□□□ -1.28
CD44-232ENST00000531118 SLC25A53Q5H9E4 307 aa7.06□□□□□ -1.28
CD44-232ENST00000531118 ZNF311Q5JNZ3 666 aa7.06□□□□□ -1.28
CD44-232ENST00000531118 DCAF12L2Q5VW00 463 aa7.06□□□□□ -1.28
CD44-232ENST00000531118 LETMD1Q6P1Q0 360 aa7.06□□□□□ -1.28
CD44-232ENST00000531118 C17orf107Q6ZR85 190 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms