RNA–Protein interactions for RNA: ENST00000531042.5

CPSF1-205, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-205ENST00000531042 MAGED1Q9Y5V3 778 aaPredicted RBP13.95□□□□□ -0.18
CPSF1-205ENST00000531042 ADAM11O75078 769 aa13.94□□□□□ -0.18
CPSF1-205ENST00000531042 PGM3O95394 542 aa13.94□□□□□ -0.18
CPSF1-205ENST00000531042 GGT1P19440 569 aa13.94□□□□□ -0.18
CPSF1-205ENST00000531042 FKBP2P26885 142 aaKnown RBP13.94□□□□□ -0.18
CPSF1-205ENST00000531042 CLK1P49759 484 aaKnown RBP13.94□□□□□ -0.18
CPSF1-205ENST00000531042 NME5P56597 212 aa13.94□□□□□ -0.18
CPSF1-205ENST00000531042 UFM1P61960 85 aa13.94□□□□□ -0.18
CPSF1-205ENST00000531042 HPCAP84074 193 aa13.94□□□□□ -0.18
CPSF1-205ENST00000531042 BST1Q10588 318 aa13.94□□□□□ -0.18
CPSF1-205ENST00000531042 SYPL1Q16563 259 aa13.94□□□□□ -0.18
CPSF1-205ENST00000531042 PGGHGQ32M88 737 aa13.94□□□□□ -0.18
CPSF1-205ENST00000531042 TIMM23BQ5SRD1 257 aa13.94□□□□□ -0.18
CPSF1-205ENST00000531042 CEP85LQ5SZL2 805 aa13.94□□□□□ -0.18
CPSF1-205ENST00000531042 FBXW9Q5XUX1 488 aa13.94□□□□□ -0.18
CPSF1-205ENST00000531042 SSX8Q7RTT4 187 aa13.94□□□□□ -0.18
CPSF1-205ENST00000531042 P2RY8Q86VZ1 359 aa13.94□□□□□ -0.18
CPSF1-205ENST00000531042 RNF130Q86XS8 419 aa13.94□□□□□ -0.18
CPSF1-205ENST00000531042 ADGRG3Q86Y34 549 aa13.94□□□□□ -0.18
CPSF1-205ENST00000531042 ZNF433Q8N7K0 673 aaPredicted RBP13.94□□□□□ -0.18
CPSF1-205ENST00000531042 MUCL1Q96DR8 90 aa13.94□□□□□ -0.18
CPSF1-205ENST00000531042 ZHX1-C8orf76Q96EF9 292 aa13.94□□□□□ -0.18
CPSF1-205ENST00000531042 NOSIPQ9Y314 301 aaKnown RBP13.94□□□□□ -0.18
CPSF1-205ENST00000531042 HDGFL3Q9Y3E1 203 aa13.94□□□□□ -0.18
CPSF1-205ENST00000531042 HIVEP2P31629 2446 aa13.93□□□□□ -0.18
CPSF1-205ENST00000531042 DNHD1Q96M86 4753 aa13.93□□□□□ -0.18
CPSF1-205ENST00000531042 A0A1W2PP18 115 aa13.93□□□□□ -0.18
CPSF1-205ENST00000531042 CCDC154A6NI56 674 aa13.93□□□□□ -0.18
CPSF1-205ENST00000531042 INAFM1C9JVW0 142 aa13.93□□□□□ -0.18
CPSF1-205ENST00000531042 SDHDO14521 159 aa13.93□□□□□ -0.18
CPSF1-205ENST00000531042 DNPH1O43598 174 aa13.93□□□□□ -0.18
CPSF1-205ENST00000531042 RAMP1O60894 148 aa13.93□□□□□ -0.18
CPSF1-205ENST00000531042 IL12AP29459 219 aa13.93□□□□□ -0.18
CPSF1-205ENST00000531042 CDKN1AP38936 164 aa13.93□□□□□ -0.18
CPSF1-205ENST00000531042 IDH2P48735 452 aaKnown RBP13.93□□□□□ -0.18
CPSF1-205ENST00000531042 ETFDHQ16134 617 aa13.93□□□□□ -0.18
CPSF1-205ENST00000531042 CLEC12BQ2HXU8 276 aa13.93□□□□□ -0.18
CPSF1-205ENST00000531042 SPATA19Q7Z5L4 167 aa13.93□□□□□ -0.18
CPSF1-205ENST00000531042 PRIMA1Q86XR5 153 aa13.93□□□□□ -0.18
CPSF1-205ENST00000531042 CMIPQ8IY22 773 aa13.93□□□□□ -0.18
CPSF1-205ENST00000531042 TRIML2Q8N7C3 387 aa13.93□□□□□ -0.18
CPSF1-205ENST00000531042 ANKFN1Q8N957 763 aa13.93□□□□□ -0.18
CPSF1-205ENST00000531042 PIGXQ8TBF5 258 aa13.93□□□□□ -0.18
CPSF1-205ENST00000531042 CNOT9Q92600 299 aaKnown RBP13.93□□□□□ -0.18
CPSF1-205ENST00000531042 GTPBP3Q969Y2 492 aaKnown RBP13.93□□□□□ -0.18
CPSF1-205ENST00000531042 ZBTB9Q96C00 473 aa13.93□□□□□ -0.18
CPSF1-205ENST00000531042 DNAJA3Q96EY1 480 aa13.93□□□□□ -0.18
CPSF1-205ENST00000531042 TRNT1Q96Q11 434 aaKnown RBP13.93□□□□□ -0.18
CPSF1-205ENST00000531042 PANX1Q96RD7 426 aa13.93□□□□□ -0.18
CPSF1-205ENST00000531042 PAIP2Q9BPZ3 127 aaKnown RBP13.93□□□□□ -0.18
CPSF1-205ENST00000531042 OR11A1Q9GZK7 315 aa13.93□□□□□ -0.18
CPSF1-205ENST00000531042 SLC38A1Q9H2H9 487 aa13.93□□□□□ -0.18
CPSF1-205ENST00000531042 AIG1Q9NVV5 245 aa13.93□□□□□ -0.18
CPSF1-205ENST00000531042 NPAP1Q9NZP6 1156 aa13.93□□□□□ -0.18
CPSF1-205ENST00000531042 LIPT1Q9Y234 373 aa13.93□□□□□ -0.18
CPSF1-205ENST00000531042 TRAPPC4Q9Y296 219 aa13.93□□□□□ -0.18
CPSF1-205ENST00000531042 CSPG4Q6UVK1 2322 aa13.93□□□□□ -0.18
CPSF1-205ENST00000531042 CADP27708 2225 aa13.92□□□□□ -0.18
CPSF1-205ENST00000531042 GOLGA8QA0A0J9YX86 632 aa13.92□□□□□ -0.18
CPSF1-205ENST00000531042 GOLGA8OA6NCC3 632 aa13.92□□□□□ -0.18
CPSF1-205ENST00000531042 AGAP5A6NIR3 686 aa13.92□□□□□ -0.18
CPSF1-205ENST00000531042 OR5H1A6NKK0 313 aa13.92□□□□□ -0.18
CPSF1-205ENST00000531042 SHISA9B4DS77 424 aa13.92□□□□□ -0.18
CPSF1-205ENST00000531042 GOLGA8NF8WBI6 632 aa13.92□□□□□ -0.18
CPSF1-205ENST00000531042 AP3D1O14617 1153 aa13.92□□□□□ -0.18
CPSF1-205ENST00000531042 GPR171O14626 319 aa13.92□□□□□ -0.18
CPSF1-205ENST00000531042 IGHV3-9P01782 118 aa13.92□□□□□ -0.18
CPSF1-205ENST00000531042 PGRP06401 933 aa13.92□□□□□ -0.18
CPSF1-205ENST00000531042 THBS1P07996 1170 aa13.92□□□□□ -0.18
CPSF1-205ENST00000531042 CHRM4P08173 479 aa13.92□□□□□ -0.18
CPSF1-205ENST00000531042 NTF4P34130 210 aa13.92□□□□□ -0.18
CPSF1-205ENST00000531042 IDUAP35475 653 aa13.92□□□□□ -0.18
CPSF1-205ENST00000531042 CDKN2CP42773 168 aa13.92□□□□□ -0.18
CPSF1-205ENST00000531042 HTR3AP46098 478 aa13.92□□□□□ -0.18
CPSF1-205ENST00000531042 SLC16A1P53985 500 aa13.92□□□□□ -0.18
CPSF1-205ENST00000531042 TXNL4AP83876 142 aaKnown RBP13.92□□□□□ -0.18
CPSF1-205ENST00000531042 PPP2R2BQ00005 443 aa13.92□□□□□ -0.18
CPSF1-205ENST00000531042 LRRC74BQ6ZQY2 392 aa13.92□□□□□ -0.18
CPSF1-205ENST00000531042 ZNF621Q6ZSS3 439 aa13.92□□□□□ -0.18
CPSF1-205ENST00000531042 CCDC103Q8IW40 242 aa13.92□□□□□ -0.18
CPSF1-205ENST00000531042 UBE2J2Q8N2K1 259 aa13.92□□□□□ -0.18
CPSF1-205ENST00000531042 APH1AQ96BI3 265 aa13.92□□□□□ -0.18
CPSF1-205ENST00000531042 OR52E6Q96RD3 313 aa13.92□□□□□ -0.18
CPSF1-205ENST00000531042 INPP5KQ9BT40 448 aa13.92□□□□□ -0.18
CPSF1-205ENST00000531042 CISD1Q9NZ45 108 aaKnown RBP13.92□□□□□ -0.18
CPSF1-205ENST00000531042 RAB21Q9UL25 225 aa13.92□□□□□ -0.18
CPSF1-205ENST00000531042 GPR45Q9Y5Y3 372 aa13.92□□□□□ -0.18
CPSF1-205ENST00000531042 JMJD1CQ15652 2540 aa13.92□□□□□ -0.18
CPSF1-205ENST00000531042 TMED7-TICAM2A0A0A6YYA0 188 aa13.91□□□□□ -0.18
CPSF1-205ENST00000531042 RNF223E7ERA6 249 aa13.91□□□□□ -0.18
CPSF1-205ENST00000531042 ABCD4O14678 606 aa13.91□□□□□ -0.18
CPSF1-205ENST00000531042 MRPL33O75394 65 aaKnown RBP13.91□□□□□ -0.18
CPSF1-205ENST00000531042 RAD51DO75771 328 aa13.91□□□□□ -0.18
CPSF1-205ENST00000531042 CD8AP01732 235 aa13.91□□□□□ -0.18
CPSF1-205ENST00000531042 CCNA2P20248 432 aa13.91□□□□□ -0.18
CPSF1-205ENST00000531042 RPS4Y1P22090 263 aaKnown RBP13.91□□□□□ -0.18
CPSF1-205ENST00000531042 MAGEA8P43361 318 aa13.91□□□□□ -0.18
CPSF1-205ENST00000531042 ANXA11P50995 505 aaKnown RBP13.91□□□□□ -0.18
CPSF1-205ENST00000531042 OR2B6P58173 313 aa13.91□□□□□ -0.18
CPSF1-205ENST00000531042 H3F3AP84243 136 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms