RNA–Protein interactions for RNA: ENST00000530784.1

CSDE1-213, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-213ENST00000530784 RERGQ96A58 199 aaPredicted RBP5.99□□□□□ -1.45
CSDE1-213ENST00000530784 BAG1Q99933 345 aaPredicted RBP5.99□□□□□ -1.45
CSDE1-213ENST00000530784 IL22Q9GZX6 179 aa5.99□□□□□ -1.45
CSDE1-213ENST00000530784 DRC3Q9H069 523 aa5.99□□□□□ -1.45
CSDE1-213ENST00000530784 TREX1Q9NSU2 369 aa5.99□□□□□ -1.45
CSDE1-213ENST00000530784 BFARQ9NZS9 450 aa5.99□□□□□ -1.45
CSDE1-213ENST00000530784 SEC14L3Q9UDX4 400 aa5.99□□□□□ -1.45
CSDE1-213ENST00000530784 CACNG5Q9UF02 275 aa5.99□□□□□ -1.45
CSDE1-213ENST00000530784 TAC3Q9UHF0 121 aa5.99□□□□□ -1.45
CSDE1-213ENST00000530784 PCYOX1Q9UHG3 505 aa5.99□□□□□ -1.45
CSDE1-213ENST00000530784 TEKT2Q9UIF3 430 aa5.99□□□□□ -1.45
CSDE1-213ENST00000530784 SH3BGRL2Q9UJC5 107 aa5.99□□□□□ -1.45
CSDE1-213ENST00000530784 PCDHGB4Q9UN71 923 aa5.99□□□□□ -1.45
CSDE1-213ENST00000530784 CROCCQ5TZA2 2017 aa5.99□□□□□ -1.45
CSDE1-213ENST00000530784 NOTCH2Q04721 2471 aa5.98□□□□□ -1.45
CSDE1-213ENST00000530784 SPTBN1Q01082 2364 aaKnown RBP5.98□□□□□ -1.45
CSDE1-213ENST00000530784 LOC102723996A0A087X1L8 192 aa5.98□□□□□ -1.45
CSDE1-213ENST00000530784 A0A0A6YYC8 382 aaPredicted RBP5.98□□□□□ -1.45
CSDE1-213ENST00000530784 IGKV1-8A0A0C4DH67 115 aa5.98□□□□□ -1.45
CSDE1-213ENST00000530784 A0A1W2PRB8 838 aa5.98□□□□□ -1.45
CSDE1-213ENST00000530784 ARHGEF33A8MVX0 844 aa5.98□□□□□ -1.45
CSDE1-213ENST00000530784 E5RI56 91 aa5.98□□□□□ -1.45
CSDE1-213ENST00000530784 I3L1I5 382 aaPredicted RBP5.98□□□□□ -1.45
CSDE1-213ENST00000530784 TXNDC9O14530 226 aa5.98□□□□□ -1.45
CSDE1-213ENST00000530784 TRMUO75648 421 aaKnown RBP5.98□□□□□ -1.45
CSDE1-213ENST00000530784 VAPBO95292 243 aa5.98□□□□□ -1.45
CSDE1-213ENST00000530784 WDPCPO95876 746 aa5.98□□□□□ -1.45
CSDE1-213ENST00000530784 CATP04040 527 aaKnown RBP5.98□□□□□ -1.45
CSDE1-213ENST00000530784 ZSCAN5DPP0CG00 497 aa5.98□□□□□ -1.45
CSDE1-213ENST00000530784 C8orf89P0DMQ9 161 aa5.98□□□□□ -1.45
CSDE1-213ENST00000530784 COX6B1P14854 86 aa5.98□□□□□ -1.45
CSDE1-213ENST00000530784 RPL22P35268 128 aaKnown RBP5.98□□□□□ -1.45
CSDE1-213ENST00000530784 HSD17B2P37059 387 aa5.98□□□□□ -1.45
CSDE1-213ENST00000530784 SLC26A3P40879 764 aa5.98□□□□□ -1.45
CSDE1-213ENST00000530784 WNT5AP41221 380 aa5.98□□□□□ -1.45
CSDE1-213ENST00000530784 CA7P43166 264 aa5.98□□□□□ -1.45
CSDE1-213ENST00000530784 NPY2RP49146 381 aa5.98□□□□□ -1.45
CSDE1-213ENST00000530784 BASP1P80723 227 aaKnown RBP5.98□□□□□ -1.45
CSDE1-213ENST00000530784 MAT1AQ00266 395 aaKnown RBP5.98□□□□□ -1.45
CSDE1-213ENST00000530784 ZNF33BQ06732 778 aa5.98□□□□□ -1.45
CSDE1-213ENST00000530784 SNX1Q13596 522 aa5.98□□□□□ -1.45
CSDE1-213ENST00000530784 ARHGAP19Q14CB8 494 aa5.98□□□□□ -1.45
CSDE1-213ENST00000530784 NDUFA9Q16795 377 aa5.98□□□□□ -1.45
CSDE1-213ENST00000530784 TYSND1Q2T9J0 566 aa5.98□□□□□ -1.45
CSDE1-213ENST00000530784 TTLL9Q3SXZ7 439 aa5.98□□□□□ -1.45
CSDE1-213ENST00000530784 MFSD4BQ5TF39 518 aa5.98□□□□□ -1.45
CSDE1-213ENST00000530784 LRRC8BQ6P9F7 803 aa5.98□□□□□ -1.45
CSDE1-213ENST00000530784 TMEM205Q6UW68 189 aa5.98□□□□□ -1.45
CSDE1-213ENST00000530784 ZNF554Q86TJ5 538 aa5.98□□□□□ -1.45
CSDE1-213ENST00000530784 SLC13A5Q86YT5 568 aaPredicted RBP5.98□□□□□ -1.45
CSDE1-213ENST00000530784 OR1J1Q8NGS3 322 aa5.98□□□□□ -1.45
CSDE1-213ENST00000530784 METTL21AQ8WXB1 218 aa5.98□□□□□ -1.45
CSDE1-213ENST00000530784 LPGAT1Q92604 370 aa5.98□□□□□ -1.45
CSDE1-213ENST00000530784 BIRC8Q96P09 236 aa5.98□□□□□ -1.45
CSDE1-213ENST00000530784 OR2A5Q96R48 311 aa5.98□□□□□ -1.45
CSDE1-213ENST00000530784 PAFAH2Q99487 392 aa5.98□□□□□ -1.45
CSDE1-213ENST00000530784 DESI2Q9BSY9 194 aa5.98□□□□□ -1.45
CSDE1-213ENST00000530784 CHST11Q9NPF2 352 aa5.98□□□□□ -1.45
CSDE1-213ENST00000530784 C19orf25Q9UFG5 118 aaPredicted RBP5.98□□□□□ -1.45
CSDE1-213ENST00000530784 MED13Q9UHV7 2174 aa5.98□□□□□ -1.45
CSDE1-213ENST00000530784 ESPL1Q14674 2120 aa5.98□□□□□ -1.45
CSDE1-213ENST00000530784 FER1L5A0AVI2 2057 aa5.97□□□□□ -1.45
CSDE1-213ENST00000530784 CELSR2Q9HCU4 2923 aa5.97□□□□□ -1.45
CSDE1-213ENST00000530784 GIMAP1-GIMAP5A0A087WTJ2 511 aa5.97□□□□□ -1.45
CSDE1-213ENST00000530784 IGHV3-20A0A0C4DH32 117 aa5.97□□□□□ -1.45
CSDE1-213ENST00000530784 IGHV4-61A0A0C4DH41 118 aa5.97□□□□□ -1.45
CSDE1-213ENST00000530784 A8MUI8 341 aa5.97□□□□□ -1.45
CSDE1-213ENST00000530784 PRR32B1ATL7 298 aa5.97□□□□□ -1.45
CSDE1-213ENST00000530784 GOLGA8KD6RF30 607 aa5.97□□□□□ -1.45
CSDE1-213ENST00000530784 E9PI62 339 aa5.97□□□□□ -1.45
CSDE1-213ENST00000530784 GOLGA8TH3BQL2 631 aa5.97□□□□□ -1.45
CSDE1-213ENST00000530784 HAT1O14929 419 aa5.97□□□□□ -1.45
CSDE1-213ENST00000530784 P2RX6O15547 441 aa5.97□□□□□ -1.45
CSDE1-213ENST00000530784 ZNF500O60304 480 aaPredicted RBP5.97□□□□□ -1.45
CSDE1-213ENST00000530784 SLC19A2O60779 497 aa5.97□□□□□ -1.45
CSDE1-213ENST00000530784 PSIP1O75475 530 aaKnown RBP5.97□□□□□ -1.45
CSDE1-213ENST00000530784 SLC16A8O95907 504 aa5.97□□□□□ -1.45
CSDE1-213ENST00000530784 IGHV4-59P01825 116 aa5.97□□□□□ -1.45
CSDE1-213ENST00000530784 OGNP20774 298 aaKnown RBP5.97□□□□□ -1.45
CSDE1-213ENST00000530784 HTR1EP28566 365 aa5.97□□□□□ -1.45
CSDE1-213ENST00000530784 ADARP55265 1226 aaKnown RBP5.97□□□□□ -1.45
CSDE1-213ENST00000530784 RELAQ04206 551 aa5.97□□□□□ -1.45
CSDE1-213ENST00000530784 PRDX1Q06830 199 aaKnown RBP5.97□□□□□ -1.45
CSDE1-213ENST00000530784 FAM53BQ14153 422 aa5.97□□□□□ -1.45
CSDE1-213ENST00000530784 P2RY6Q15077 328 aa5.97□□□□□ -1.45
CSDE1-213ENST00000530784 ZNF630Q2M218 657 aaPredicted RBP5.97□□□□□ -1.45
CSDE1-213ENST00000530784 KLHL38Q2WGJ6 581 aa5.97□□□□□ -1.45
CSDE1-213ENST00000530784 ACSBG2Q5FVE4 666 aa5.97□□□□□ -1.45
CSDE1-213ENST00000530784 C4orf22Q6V702 233 aa5.97□□□□□ -1.45
CSDE1-213ENST00000530784 SLC16A9Q7RTY1 509 aa5.97□□□□□ -1.45
CSDE1-213ENST00000530784 RNF10Q8N5U6 811 aaKnown RBP5.97□□□□□ -1.45
CSDE1-213ENST00000530784 PPFIBP2Q8ND30 876 aa5.97□□□□□ -1.45
CSDE1-213ENST00000530784 PAPD5Q8NDF8 572 aaKnown RBP5.97□□□□□ -1.45
CSDE1-213ENST00000530784 MCOLN3Q8TDD5 553 aa5.97□□□□□ -1.45
CSDE1-213ENST00000530784 RNF128Q8TEB7 428 aa5.97□□□□□ -1.45
CSDE1-213ENST00000530784 PTPMT1Q8WUK0 201 aaPredicted RBP5.97□□□□□ -1.45
CSDE1-213ENST00000530784 GIMAP5Q96F15 307 aa5.97□□□□□ -1.45
CSDE1-213ENST00000530784 MAGED4Q96JG8 741 aa5.97□□□□□ -1.45
CSDE1-213ENST00000530784 PRAC1Q96KF2 57 aa5.97□□□□□ -1.45
CSDE1-213ENST00000530784 IMMP1LQ96LU5 166 aa5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms