RNA–Protein interactions for RNA: ENST00000530468.5

TM9SF1-209, Transcript of transmembrane 9 superfamily member 1, human

TSL 2

Gene TM9SF1, Length 1,065 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TM9SF1-209	ENST00000530468	ANK3	Q12955	4377 aa	Known RBP	13.72	□□□□□ -0.21
TM9SF1-209	ENST00000530468	IGHV4-30-2	A0A087WSY4	118 aa		13.72	□□□□□ -0.21
TM9SF1-209	ENST00000530468	SPAG7	O75391	227 aa		13.72	□□□□□ -0.21
TM9SF1-209	ENST00000530468	MRPL33	O75394	65 aa	Known RBP	13.72	□□□□□ -0.21
TM9SF1-209	ENST00000530468	NUDT17	P0C025	328 aa		13.72	□□□□□ -0.21
TM9SF1-209	ENST00000530468	CD40	P25942	277 aa		13.72	□□□□□ -0.21
TM9SF1-209	ENST00000530468	ARRB2	P32121	409 aa		13.72	□□□□□ -0.21
TM9SF1-209	ENST00000530468	SLC16A1	P53985	500 aa		13.72	□□□□□ -0.21
TM9SF1-209	ENST00000530468	IRX1	P78414	480 aa	Predicted RBP	13.72	□□□□□ -0.21
TM9SF1-209	ENST00000530468	AP1AR	Q63HQ0	302 aa		13.72	□□□□□ -0.21
TM9SF1-209	ENST00000530468	GRINA	Q7Z429	371 aa		13.72	□□□□□ -0.21
TM9SF1-209	ENST00000530468	MUC15	Q8N387	334 aa		13.72	□□□□□ -0.21
TM9SF1-209	ENST00000530468	OR4A15	Q8NGL6	344 aa		13.72	□□□□□ -0.21
TM9SF1-209	ENST00000530468	OR52N5	Q8NH56	324 aa		13.72	□□□□□ -0.21
TM9SF1-209	ENST00000530468	EXOSC3	Q9NQT5	275 aa	Known RBP	13.72	□□□□□ -0.21
TM9SF1-209	ENST00000530468	CTPS2	Q9NRF8	586 aa		13.72	□□□□□ -0.21
TM9SF1-209	ENST00000530468	LGALS13	Q9UHV8	139 aa		13.72	□□□□□ -0.21
TM9SF1-209	ENST00000530468	WDR45	Q9Y484	360 aa		13.72	□□□□□ -0.21
TM9SF1-209	ENST00000530468	FBN1	P35555	2871 aa	Known RBP	13.72	□□□□□ -0.21
TM9SF1-209	ENST00000530468		A0A096LNT2	108 aa		13.71	□□□□□ -0.21
TM9SF1-209	ENST00000530468	ELOA3D	A6NLF2	546 aa	Predicted RBP	13.71	□□□□□ -0.21
TM9SF1-209	ENST00000530468		E7EQL1	145 aa		13.71	□□□□□ -0.21
TM9SF1-209	ENST00000530468	IGHV3-9	P01782	118 aa		13.71	□□□□□ -0.21
TM9SF1-209	ENST00000530468	BPGM	P07738	259 aa		13.71	□□□□□ -0.21
TM9SF1-209	ENST00000530468	SLC25A16	P16260	332 aa		13.71	□□□□□ -0.21
TM9SF1-209	ENST00000530468	UQCRC2	P22695	453 aa		13.71	□□□□□ -0.21
TM9SF1-209	ENST00000530468	MAGEA8	P43361	318 aa		13.71	□□□□□ -0.21
TM9SF1-209	ENST00000530468	ZNF83	P51522	516 aa		13.71	□□□□□ -0.21
TM9SF1-209	ENST00000530468	RAB35	Q15286	201 aa		13.71	□□□□□ -0.21
TM9SF1-209	ENST00000530468	MAPK14	Q16539	360 aa		13.71	□□□□□ -0.21
TM9SF1-209	ENST00000530468	ELOA3B	Q3SY89	546 aa		13.71	□□□□□ -0.21
TM9SF1-209	ENST00000530468	C6orf52	Q5T4I8	152 aa		13.71	□□□□□ -0.21
TM9SF1-209	ENST00000530468	C1QTNF12	Q5T7M4	302 aa		13.71	□□□□□ -0.21
TM9SF1-209	ENST00000530468	TYW3	Q6IPR3	259 aa	Known RBP	13.71	□□□□□ -0.21
TM9SF1-209	ENST00000530468	ZNF544	Q6NX49	715 aa		13.71	□□□□□ -0.21
TM9SF1-209	ENST00000530468	OLIG3	Q7RTU3	272 aa		13.71	□□□□□ -0.21
TM9SF1-209	ENST00000530468	CLEC4F	Q8N1N0	589 aa		13.71	□□□□□ -0.21
TM9SF1-209	ENST00000530468	VPS37A	Q8NEZ2	397 aa		13.71	□□□□□ -0.21
TM9SF1-209	ENST00000530468	ELOA3	Q8NG57	546 aa		13.71	□□□□□ -0.21
TM9SF1-209	ENST00000530468	XAGE5	Q8WWM1	108 aa		13.71	□□□□□ -0.21
TM9SF1-209	ENST00000530468	TMEM158	Q8WZ71	300 aa		13.71	□□□□□ -0.21
TM9SF1-209	ENST00000530468	ARL5B	Q96KC2	179 aa		13.71	□□□□□ -0.21
TM9SF1-209	ENST00000530468	MUS81	Q96NY9	551 aa		13.71	□□□□□ -0.21
TM9SF1-209	ENST00000530468	SAP130	Q9H0E3	1048 aa		13.71	□□□□□ -0.21
TM9SF1-209	ENST00000530468	CDC42EP3	Q9UKI2	254 aa		13.71	□□□□□ -0.21
TM9SF1-209	ENST00000530468	TRAPPC4	Q9Y296	219 aa		13.71	□□□□□ -0.21
TM9SF1-209	ENST00000530468	RTTN	Q86VV8	2226 aa		13.71	□□□□□ -0.22
TM9SF1-209	ENST00000530468	ABCA1	O95477	2261 aa		13.7	□□□□□ -0.22
TM9SF1-209	ENST00000530468	SON	P18583	2426 aa	Known RBP	13.7	□□□□□ -0.22
TM9SF1-209	ENST00000530468	PRSS51	A0A1B0GVH4	220 aa		13.7	□□□□□ -0.22
TM9SF1-209	ENST00000530468	FAM234B	A2RU67	622 aa		13.7	□□□□□ -0.22
TM9SF1-209	ENST00000530468		H7C417	338 aa		13.7	□□□□□ -0.22
TM9SF1-209	ENST00000530468	OR12D1	P0DN82	309 aa		13.7	□□□□□ -0.22
TM9SF1-209	ENST00000530468	PTN	P21246	168 aa		13.7	□□□□□ -0.22
TM9SF1-209	ENST00000530468	RYK	P34925	604 aa		13.7	□□□□□ -0.22
TM9SF1-209	ENST00000530468	HTR3A	P46098	478 aa		13.7	□□□□□ -0.22
TM9SF1-209	ENST00000530468	KHK	P50053	298 aa		13.7	□□□□□ -0.22
TM9SF1-209	ENST00000530468	FABP6	P51161	128 aa		13.7	□□□□□ -0.22
TM9SF1-209	ENST00000530468	CHRNE	Q04844	493 aa		13.7	□□□□□ -0.22
TM9SF1-209	ENST00000530468	LOXL1	Q08397	574 aa	Predicted RBP	13.7	□□□□□ -0.22
TM9SF1-209	ENST00000530468	SPOCK1	Q08629	439 aa		13.7	□□□□□ -0.22
TM9SF1-209	ENST00000530468	IFFO1	Q0D2I5	559 aa		13.7	□□□□□ -0.22
TM9SF1-209	ENST00000530468	GABRA6	Q16445	453 aa		13.7	□□□□□ -0.22
TM9SF1-209	ENST00000530468	TMEM249	Q2WGJ8	235 aa		13.7	□□□□□ -0.22
TM9SF1-209	ENST00000530468	ANXA8L1	Q5VT79	327 aa		13.7	□□□□□ -0.22
TM9SF1-209	ENST00000530468	EMB	Q6PCB8	327 aa		13.7	□□□□□ -0.22
TM9SF1-209	ENST00000530468	C17orf78	Q8N4C9	275 aa		13.7	□□□□□ -0.22
TM9SF1-209	ENST00000530468	ARFGAP2	Q8N6H7	521 aa		13.7	□□□□□ -0.22
TM9SF1-209	ENST00000530468	ROPN1L	Q96C74	230 aa		13.7	□□□□□ -0.22
TM9SF1-209	ENST00000530468	TNFRSF13C	Q96RJ3	184 aa		13.7	□□□□□ -0.22
TM9SF1-209	ENST00000530468	ROPN1B	Q9BZX4	212 aa	Predicted RBP	13.7	□□□□□ -0.22
TM9SF1-209	ENST00000530468	DPY30	Q9C005	99 aa		13.7	□□□□□ -0.22
TM9SF1-209	ENST00000530468	AMBRA1	Q9C0C7	1298 aa		13.7	□□□□□ -0.22
TM9SF1-209	ENST00000530468	ROPN1	Q9HAT0	212 aa	Predicted RBP	13.7	□□□□□ -0.22
TM9SF1-209	ENST00000530468	ST6GALNAC1	Q9NSC7	600 aa	Predicted RBP	13.7	□□□□□ -0.22
TM9SF1-209	ENST00000530468	TMEM181	Q9P2C4	612 aa		13.7	□□□□□ -0.22
TM9SF1-209	ENST00000530468	DCTN4	Q9UJW0	460 aa		13.7	□□□□□ -0.22
TM9SF1-209	ENST00000530468	CAD	P27708	2225 aa		13.7	□□□□□ -0.22
TM9SF1-209	ENST00000530468	COL6A5	A8TX70	2615 aa		13.69	□□□□□ -0.22
TM9SF1-209	ENST00000530468		M0R1B8	84 aa		13.69	□□□□□ -0.22
TM9SF1-209	ENST00000530468	GPRIN2	O60269	458 aa		13.69	□□□□□ -0.22
TM9SF1-209	ENST00000530468	EIF1B	O60739	113 aa	Known RBP	13.69	□□□□□ -0.22
TM9SF1-209	ENST00000530468	BCAS1	O75363	584 aa	Predicted RBP	13.69	□□□□□ -0.22
TM9SF1-209	ENST00000530468	CSF3	P09919	207 aa		13.69	□□□□□ -0.22
TM9SF1-209	ENST00000530468	FAM157C	P0CG43	387 aa		13.69	□□□□□ -0.22
TM9SF1-209	ENST00000530468	BMP4	P12644	408 aa		13.69	□□□□□ -0.22
TM9SF1-209	ENST00000530468	CASP9	P55211	416 aa		13.69	□□□□□ -0.22
TM9SF1-209	ENST00000530468	OR2B6	P58173	313 aa		13.69	□□□□□ -0.22
TM9SF1-209	ENST00000530468	KCNJ10	P78508	379 aa		13.69	□□□□□ -0.22
TM9SF1-209	ENST00000530468	HPCA	P84074	193 aa		13.69	□□□□□ -0.22
TM9SF1-209	ENST00000530468	VLDLR	P98155	873 aa		13.69	□□□□□ -0.22
TM9SF1-209	ENST00000530468	FUT5	Q11128	374 aa		13.69	□□□□□ -0.22
TM9SF1-209	ENST00000530468	DPY19L1	Q2PZI1	675 aa		13.69	□□□□□ -0.22
TM9SF1-209	ENST00000530468	SAXO2	Q658L1	398 aa		13.69	□□□□□ -0.22
TM9SF1-209	ENST00000530468	TNFAIP8L2	Q6P589	184 aa	Predicted RBP	13.69	□□□□□ -0.22
TM9SF1-209	ENST00000530468	FRRS1	Q6ZNA5	592 aa		13.69	□□□□□ -0.22
TM9SF1-209	ENST00000530468	ADGRG3	Q86Y34	549 aa		13.69	□□□□□ -0.22
TM9SF1-209	ENST00000530468	PHC2	Q8IXK0	858 aa		13.69	□□□□□ -0.22
TM9SF1-209	ENST00000530468	CMIP	Q8IY22	773 aa		13.69	□□□□□ -0.22
TM9SF1-209	ENST00000530468	C1orf162	Q8NEQ5	155 aa	Predicted RBP	13.69	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms