RNA–Protein interactions for RNA: ENST00000530309.1

CASP4-208, Transcript of caspase 4, humanhuman

TSL 2

Gene CASP4, Length 481 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-208ENST00000530309 BBOX1O75936 387 aa4.13□□□□□ -1.75
CASP4-208ENST00000530309 ZNF44P15621 663 aa4.13□□□□□ -1.75
CASP4-208ENST00000530309 ANXA13P27216 316 aa4.13□□□□□ -1.75
CASP4-208ENST00000530309 UGT1A5P35504 534 aa4.13□□□□□ -1.75
CASP4-208ENST00000530309 BIDP55957 195 aa4.13□□□□□ -1.75
CASP4-208ENST00000530309 ORC2Q13416 577 aaPredicted RBP4.13□□□□□ -1.75
CASP4-208ENST00000530309 CCDC50Q8IVM0 306 aa4.13□□□□□ -1.75
CASP4-208ENST00000530309 SLC35F2Q8IXU6 374 aa4.13□□□□□ -1.75
CASP4-208ENST00000530309 OR52I1Q8NGK6 324 aa4.13□□□□□ -1.75
CASP4-208ENST00000530309 EFHD2Q96C19 240 aaPredicted RBP4.13□□□□□ -1.75
CASP4-208ENST00000530309 TBX15Q96SF7 602 aa4.13□□□□□ -1.75
CASP4-208ENST00000530309 ARHGDIGQ99819 225 aa4.13□□□□□ -1.75
CASP4-208ENST00000530309 LRRN3Q9H3W5 708 aa4.13□□□□□ -1.75
CASP4-208ENST00000530309 GORASP2Q9H8Y8 452 aa4.13□□□□□ -1.75
CASP4-208ENST00000530309 POPDC2Q9HBU9 364 aa4.13□□□□□ -1.75
CASP4-208ENST00000530309 SH2D2AQ9NP31 389 aa4.13□□□□□ -1.75
CASP4-208ENST00000530309 BTNL2Q9UIR0 455 aa4.13□□□□□ -1.75
CASP4-208ENST00000530309 TMCC3Q9ULS5 477 aa4.13□□□□□ -1.75
CASP4-208ENST00000530309 SLCO1B1Q9Y6L6 691 aa4.13□□□□□ -1.75
CASP4-208ENST00000530309 TTC21BQ7Z4L5 1316 aa4.13□□□□□ -1.75
CASP4-208ENST00000530309 PTCH1Q13635 1447 aa4.12□□□□□ -1.75
CASP4-208ENST00000530309 C15orf38-AP3S2A0A0A6YYH1 394 aa4.12□□□□□ -1.75
CASP4-208ENST00000530309 A0A0G2JRQ6 117 aa4.12□□□□□ -1.75
CASP4-208ENST00000530309 HELTA6NFD8 242 aa4.12□□□□□ -1.75
CASP4-208ENST00000530309 GPR89AB7ZAQ6 455 aa4.12□□□□□ -1.75
CASP4-208ENST00000530309 F5H6K3 240 aa4.12□□□□□ -1.75
CASP4-208ENST00000530309 SCGNO76038 276 aa4.12□□□□□ -1.75
CASP4-208ENST00000530309 SNAPINO95295 136 aa4.12□□□□□ -1.75
CASP4-208ENST00000530309 GPR89BP0CG08 455 aa4.12□□□□□ -1.75
CASP4-208ENST00000530309 HSMCR30P0CW71 290 aa4.12□□□□□ -1.75
CASP4-208ENST00000530309 ELK1P19419 428 aa4.12□□□□□ -1.75
CASP4-208ENST00000530309 COX5AP20674 150 aa4.12□□□□□ -1.75
CASP4-208ENST00000530309 GLRA2P23416 452 aa4.12□□□□□ -1.75
CASP4-208ENST00000530309 PTGDSP41222 190 aa4.12□□□□□ -1.75
CASP4-208ENST00000530309 HNMTP50135 292 aa4.12□□□□□ -1.75
CASP4-208ENST00000530309 ARFIP1P53367 373 aa4.12□□□□□ -1.75
CASP4-208ENST00000530309 RPS14P62263 151 aaKnown RBP4.12□□□□□ -1.75
CASP4-208ENST00000530309 GNB2P62879 340 aa4.12□□□□□ -1.75
CASP4-208ENST00000530309 KLRC3Q07444 240 aa4.12□□□□□ -1.75
CASP4-208ENST00000530309 IL17AQ16552 155 aa4.12□□□□□ -1.75
CASP4-208ENST00000530309 NLRP9Q7RTR0 991 aa4.12□□□□□ -1.75
CASP4-208ENST00000530309 VSTM4Q8IW00 320 aa4.12□□□□□ -1.75
CASP4-208ENST00000530309 OR2L13Q8N349 312 aa4.12□□□□□ -1.75
CASP4-208ENST00000530309 FAM133AQ8N9E0 248 aa4.12□□□□□ -1.75
CASP4-208ENST00000530309 HTR3CQ8WXA8 447 aa4.12□□□□□ -1.75
CASP4-208ENST00000530309 ST8SIA1Q92185 356 aa4.12□□□□□ -1.75
CASP4-208ENST00000530309 CRACR2AQ9BSW2 395 aa4.12□□□□□ -1.75
CASP4-208ENST00000530309 APMAPQ9HDC9 416 aa4.12□□□□□ -1.75
CASP4-208ENST00000530309 NAP1L2Q9ULW6 460 aaPredicted RBP4.12□□□□□ -1.75
CASP4-208ENST00000530309 POLDIP2Q9Y2S7 368 aa4.12□□□□□ -1.75
CASP4-208ENST00000530309 MEMO1Q9Y316 297 aa4.12□□□□□ -1.75
CASP4-208ENST00000530309 UGT2A1Q9Y4X1 527 aa4.12□□□□□ -1.75
CASP4-208ENST00000530309 TIMM10BQ9Y5J6 103 aa4.12□□□□□ -1.75
CASP4-208ENST00000530309 PNPLA6Q8IY17 1366 aa4.12□□□□□ -1.75
CASP4-208ENST00000530309 ARHGAP23Q9P227 1491 aa4.11□□□□□ -1.75
CASP4-208ENST00000530309 HCRTR1O43613 425 aa4.11□□□□□ -1.75
CASP4-208ENST00000530309 PFKFB2O60825 505 aa4.11□□□□□ -1.75
CASP4-208ENST00000530309 SNNO75324 88 aaPredicted RBP4.11□□□□□ -1.75
CASP4-208ENST00000530309 MTX2O75431 263 aa4.11□□□□□ -1.75
CASP4-208ENST00000530309 IGLV1-47P01700 117 aa4.11□□□□□ -1.75
CASP4-208ENST00000530309 GCAP28676 217 aa4.11□□□□□ -1.75
CASP4-208ENST00000530309 MAP3K8P41279 467 aa4.11□□□□□ -1.75
CASP4-208ENST00000530309 CSNK1G2P78368 415 aa4.11□□□□□ -1.75
CASP4-208ENST00000530309 GPM6BQ13491 265 aa4.11□□□□□ -1.75
CASP4-208ENST00000530309 RIPK1Q13546 671 aa4.11□□□□□ -1.75
CASP4-208ENST00000530309 HERPUD1Q15011 391 aa4.11□□□□□ -1.75
CASP4-208ENST00000530309 DPYSL2Q16555 572 aa4.11□□□□□ -1.75
CASP4-208ENST00000530309 NSUN5P1Q3KNT7 163 aa4.11□□□□□ -1.75
CASP4-208ENST00000530309 LRRC23Q53EV4 343 aaPredicted RBP4.11□□□□□ -1.75
CASP4-208ENST00000530309 KLF17Q5JT82 389 aaPredicted RBP4.11□□□□□ -1.75
CASP4-208ENST00000530309 GDPD3Q7L5L3 318 aa4.11□□□□□ -1.75
CASP4-208ENST00000530309 CCDC71LQ8N9Z2 235 aa4.11□□□□□ -1.75
CASP4-208ENST00000530309 DNAJA4Q8WW22 397 aaPredicted RBP4.11□□□□□ -1.75
CASP4-208ENST00000530309 MAIP1Q8WWC4 291 aa4.11□□□□□ -1.75
CASP4-208ENST00000530309 CHCHD10Q8WYQ3 142 aaPredicted RBP4.11□□□□□ -1.75
CASP4-208ENST00000530309 SMOXQ9NWM0 555 aa4.11□□□□□ -1.75
CASP4-208ENST00000530309 SMPD3Q9NY59 655 aaPredicted RBP4.11□□□□□ -1.75
CASP4-208ENST00000530309 PTBP2Q9UKA9 531 aaKnown RBP4.11□□□□□ -1.75
CASP4-208ENST00000530309 PRPF19Q9UMS4 504 aaKnown RBP4.11□□□□□ -1.75
CASP4-208ENST00000530309 A0A0J9YXY3 114 aa4.1□□□□□ -1.75
CASP4-208ENST00000530309 AP2A1O95782 977 aa4.1□□□□□ -1.75
CASP4-208ENST00000530309 HPNP05981 417 aa4.1□□□□□ -1.75
CASP4-208ENST00000530309 RBMY1CP0DJD4 496 aa4.1□□□□□ -1.75
CASP4-208ENST00000530309 FUT3P21217 361 aa4.1□□□□□ -1.75
CASP4-208ENST00000530309 RBMXP38159 391 aaKnown RBP4.1□□□□□ -1.75
CASP4-208ENST00000530309 GRIA1P42261 906 aa4.1□□□□□ -1.75
CASP4-208ENST00000530309 CASP4P49662 377 aa4.1□□□□□ -1.75
CASP4-208ENST00000530309 EFNB2P52799 333 aa4.1□□□□□ -1.75
CASP4-208ENST00000530309 GBX2P52951 348 aaPredicted RBP4.1□□□□□ -1.75
CASP4-208ENST00000530309 APOC4P55056 127 aa4.1□□□□□ -1.75
CASP4-208ENST00000530309 WNT4P56705 351 aa4.1□□□□□ -1.75
CASP4-208ENST00000530309 PDK3Q15120 406 aa4.1□□□□□ -1.75
CASP4-208ENST00000530309 EXOC3L2Q2M3D2 409 aa4.1□□□□□ -1.75
CASP4-208ENST00000530309 COQ2Q96H96 371 aa4.1□□□□□ -1.75
CASP4-208ENST00000530309 SEC22AQ96IW7 307 aa4.1□□□□□ -1.75
CASP4-208ENST00000530309 RAB34Q9BZG1 259 aa4.1□□□□□ -1.75
CASP4-208ENST00000530309 ABCB10Q9NRK6 738 aa4.1□□□□□ -1.75
CASP4-208ENST00000530309 ANAPC11Q9NYG5 84 aa4.1□□□□□ -1.75
CASP4-208ENST00000530309 TREM2Q9NZC2 230 aa4.1□□□□□ -1.75
CASP4-208ENST00000530309 COPS3Q9UNS2 423 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms