RNA–Protein interactions for RNA: ENST00000530174.1

PCNX3-203, Transcript of pecanex 3, humanhuman

TSL 1 (best)

Gene PCNX3, Length 1,229 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX3-203ENST00000530174 CDHR4A6H8M9 788 aa16.73■□□□□ 0.27
PCNX3-203ENST00000530174 TMEM247A6NEH6 219 aa16.73■□□□□ 0.27
PCNX3-203ENST00000530174 FAAHO00519 579 aa16.73■□□□□ 0.27
PCNX3-203ENST00000530174 ATE1O95260 518 aa16.73■□□□□ 0.27
PCNX3-203ENST00000530174 THBDP07204 575 aa16.73■□□□□ 0.27
PCNX3-203ENST00000530174 PPP3CBP16298 524 aa16.73■□□□□ 0.27
PCNX3-203ENST00000530174 CCNA2P20248 432 aa16.73■□□□□ 0.27
PCNX3-203ENST00000530174 HTR3AP46098 478 aa16.73■□□□□ 0.27
PCNX3-203ENST00000530174 RASGEF1BQ0VAM2 473 aa16.73■□□□□ 0.27
PCNX3-203ENST00000530174 FADDQ13158 208 aa16.73■□□□□ 0.27
PCNX3-203ENST00000530174 SQLEQ14534 574 aa16.73■□□□□ 0.27
PCNX3-203ENST00000530174 AGKQ53H12 422 aa16.73■□□□□ 0.27
PCNX3-203ENST00000530174 LRIF1Q5T3J3 769 aa16.73■□□□□ 0.27
PCNX3-203ENST00000530174 MSRB3Q8IXL7 192 aa16.73■□□□□ 0.27
PCNX3-203ENST00000530174 ZNF440Q8IYI8 595 aa16.73■□□□□ 0.27
PCNX3-203ENST00000530174 DNAJA3Q96EY1 480 aa16.73■□□□□ 0.27
PCNX3-203ENST00000530174 ZNF300Q96RE9 604 aaPredicted RBP16.73■□□□□ 0.27
PCNX3-203ENST00000530174 ACTR6Q9GZN1 396 aa16.73■□□□□ 0.27
PCNX3-203ENST00000530174 CXXC4Q9H2H0 198 aa16.73■□□□□ 0.27
PCNX3-203ENST00000530174 SLAMF8Q9P0V8 285 aa16.73■□□□□ 0.27
PCNX3-203ENST00000530174 OSGIN1Q9UJX0 560 aa16.73■□□□□ 0.27
PCNX3-203ENST00000530174 ZNF443Q9Y2A4 671 aaPredicted RBP16.73■□□□□ 0.27
PCNX3-203ENST00000530174 TMED7Q9Y3B3 224 aa16.73■□□□□ 0.27
PCNX3-203ENST00000530174 A0A0G2JPF8 293 aa16.72■□□□□ 0.27
PCNX3-203ENST00000530174 HNRNPCL2B2RXH8 293 aa16.72■□□□□ 0.27
PCNX3-203ENST00000530174 HNRNPCL3B7ZW38 293 aa16.72■□□□□ 0.27
PCNX3-203ENST00000530174 HNRNPCL1O60812 293 aaKnown RBP16.72■□□□□ 0.27
PCNX3-203ENST00000530174 GCM2O75603 506 aaPredicted RBP16.72■□□□□ 0.27
PCNX3-203ENST00000530174 PMS2P2O95744 297 aa16.72■□□□□ 0.27
PCNX3-203ENST00000530174 GKN3PP0CG01 181 aa16.72■□□□□ 0.27
PCNX3-203ENST00000530174 HNRNPCL4P0DMR1 293 aa16.72■□□□□ 0.27
PCNX3-203ENST00000530174 BMP2P12643 396 aa16.72■□□□□ 0.27
PCNX3-203ENST00000530174 UQCRBP14927 111 aa16.72■□□□□ 0.27
PCNX3-203ENST00000530174 PSMB1P20618 241 aaKnown RBP16.72■□□□□ 0.27
PCNX3-203ENST00000530174 FKBP2P26885 142 aaKnown RBP16.72■□□□□ 0.27
PCNX3-203ENST00000530174 TACR3P29371 465 aa16.72■□□□□ 0.27
PCNX3-203ENST00000530174 SLC1A3P43003 542 aa16.72■□□□□ 0.27
PCNX3-203ENST00000530174 POLR2HP52434 150 aaKnown RBP16.72■□□□□ 0.27
PCNX3-203ENST00000530174 IRX1P78414 480 aaPredicted RBP16.72■□□□□ 0.27
PCNX3-203ENST00000530174 KEAP1Q14145 624 aa16.72■□□□□ 0.27
PCNX3-203ENST00000530174 PAGE3Q5JUK9 113 aa16.72■□□□□ 0.27
PCNX3-203ENST00000530174 RNF220Q5VTB9 566 aa16.72■□□□□ 0.27
PCNX3-203ENST00000530174 ABLIM2Q6H8Q1 611 aa16.72■□□□□ 0.27
PCNX3-203ENST00000530174 CXorf67Q86X51 503 aaPredicted RBP16.72■□□□□ 0.27
PCNX3-203ENST00000530174 GABRG1Q8N1C3 465 aa16.72■□□□□ 0.27
PCNX3-203ENST00000530174 STON2Q8WXE9 905 aa16.72■□□□□ 0.27
PCNX3-203ENST00000530174 MAL2Q969L2 176 aa16.72■□□□□ 0.27
PCNX3-203ENST00000530174 MBD6Q96DN6 1003 aa16.72■□□□□ 0.27
PCNX3-203ENST00000530174 A4GALTQ9NPC4 353 aa16.72■□□□□ 0.27
PCNX3-203ENST00000530174 TMEM45AQ9NWC5 275 aa16.72■□□□□ 0.27
PCNX3-203ENST00000530174 GPR52Q9Y2T5 361 aa16.72■□□□□ 0.27
PCNX3-203ENST00000530174 HDGFL3Q9Y3E1 203 aa16.72■□□□□ 0.27
PCNX3-203ENST00000530174 ITPR3Q14573 2671 aa16.72■□□□□ 0.27
PCNX3-203ENST00000530174 TMEM72A0PK05 275 aa16.71■□□□□ 0.27
PCNX3-203ENST00000530174 ZNF724A8MTY0 619 aa16.71■□□□□ 0.27
PCNX3-203ENST00000530174 EDF1O60869 148 aaKnown RBP16.71■□□□□ 0.27
PCNX3-203ENST00000530174 THBS1P07996 1170 aa16.71■□□□□ 0.27
PCNX3-203ENST00000530174 ACAA2P42765 397 aaKnown RBP16.71■□□□□ 0.27
PCNX3-203ENST00000530174 CLK1P49759 484 aaKnown RBP16.71■□□□□ 0.27
PCNX3-203ENST00000530174 LARS2Q15031 903 aaKnown RBP16.71■□□□□ 0.27
PCNX3-203ENST00000530174 MTDHQ86UE4 582 aaKnown RBP16.71■□□□□ 0.27
PCNX3-203ENST00000530174 CLIP4Q8N3C7 705 aa16.71■□□□□ 0.27
PCNX3-203ENST00000530174 ZNF775Q96BV0 537 aaPredicted RBP16.71■□□□□ 0.27
PCNX3-203ENST00000530174 ZHX1-C8orf76Q96EF9 292 aa16.71■□□□□ 0.27
PCNX3-203ENST00000530174 HS3ST6Q96QI5 342 aa16.71■□□□□ 0.27
PCNX3-203ENST00000530174 OR10A4Q9H209 315 aa16.71■□□□□ 0.27
PCNX3-203ENST00000530174 CACYBPQ9HB71 228 aaKnown RBP16.71■□□□□ 0.27
PCNX3-203ENST00000530174 NPHS2Q9NP85 383 aa16.71■□□□□ 0.27
PCNX3-203ENST00000530174 VAPAQ9P0L0 249 aa16.71■□□□□ 0.27
PCNX3-203ENST00000530174 DCTN4Q9UJW0 460 aa16.71■□□□□ 0.27
PCNX3-203ENST00000530174 CHST2Q9Y4C5 530 aa16.71■□□□□ 0.27
PCNX3-203ENST00000530174 MED13LQ71F56 2210 aa16.71■□□□□ 0.27
PCNX3-203ENST00000530174 PRR14LQ5THK1 2151 aa16.7■□□□□ 0.26
PCNX3-203ENST00000530174 ZNF814B7Z6K7 855 aa16.7■□□□□ 0.26
PCNX3-203ENST00000530174 ZNF208O43345 1280 aa16.7■□□□□ 0.26
PCNX3-203ENST00000530174 DNPH1O43598 174 aa16.7■□□□□ 0.26
PCNX3-203ENST00000530174 LOXP28300 417 aaPredicted RBP16.7■□□□□ 0.26
PCNX3-203ENST00000530174 OR3A2P47893 321 aa16.7■□□□□ 0.26
PCNX3-203ENST00000530174 TSC22D1Q15714 1073 aa16.7■□□□□ 0.26
PCNX3-203ENST00000530174 PRAMEF8Q5VWM4 474 aa16.7■□□□□ 0.26
PCNX3-203ENST00000530174 PRAMEF7Q5VXH5 474 aa16.7■□□□□ 0.26
PCNX3-203ENST00000530174 C10orf111Q8N326 155 aa16.7■□□□□ 0.26
PCNX3-203ENST00000530174 S100PBPQ96BU1 408 aa16.7■□□□□ 0.26
PCNX3-203ENST00000530174 DDIT4LQ96D03 193 aa16.7■□□□□ 0.26
PCNX3-203ENST00000530174 ALPK1Q96QP1 1244 aa16.7■□□□□ 0.26
PCNX3-203ENST00000530174 SPATA9Q9BWV2 254 aa16.7■□□□□ 0.26
PCNX3-203ENST00000530174 ADAM19Q9H013 955 aa16.7■□□□□ 0.26
PCNX3-203ENST00000530174 BCL2L10Q9HD36 194 aa16.7■□□□□ 0.26
PCNX3-203ENST00000530174 TMEM181Q9P2C4 612 aa16.7■□□□□ 0.26
PCNX3-203ENST00000530174 ZNF232Q9UNY5 417 aa16.7■□□□□ 0.26
PCNX3-203ENST00000530174 IFT52Q9Y366 437 aa16.7■□□□□ 0.26
PCNX3-203ENST00000530174 IGKV3D-15A0A087WSY6 115 aa16.69■□□□□ 0.26
PCNX3-203ENST00000530174 TRBV5-3A0A0A0MS03 114 aa16.69■□□□□ 0.26
PCNX3-203ENST00000530174 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP16.69■□□□□ 0.26
PCNX3-203ENST00000530174 A0A1W2PP18 115 aa16.69■□□□□ 0.26
PCNX3-203ENST00000530174 ZC3H12DA2A288 527 aaKnown RBP16.69■□□□□ 0.26
PCNX3-203ENST00000530174 KLF4O43474 513 aa16.69■□□□□ 0.26
PCNX3-203ENST00000530174 ADAP00813 363 aa16.69■□□□□ 0.26
PCNX3-203ENST00000530174 PRG2P13727 222 aa16.69■□□□□ 0.26
PCNX3-203ENST00000530174 NCF2P19878 526 aaPredicted RBP16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms