RNA–Protein interactions for RNA: ENST00000528516.5

LTBP3-210, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 1 (best)

Gene LTBP3, Length 3,935 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-210ENST00000528516 C20orf85Q9H1P6 137 aa16.64■□□□□ 0.25
LTBP3-210ENST00000528516 C1GALT1Q9NS00 363 aa16.64■□□□□ 0.25
LTBP3-210ENST00000528516 CYSLTR2Q9NS75 346 aa16.64■□□□□ 0.25
LTBP3-210ENST00000528516 MRTO4Q9UKD2 239 aaKnown RBP16.64■□□□□ 0.25
LTBP3-210ENST00000528516 A0A0B4J203 849 aa16.63■□□□□ 0.25
LTBP3-210ENST00000528516 ZC3H12DA2A288 527 aaKnown RBP16.63■□□□□ 0.25
LTBP3-210ENST00000528516 PRRT4C9JH25 899 aa16.63■□□□□ 0.25
LTBP3-210ENST00000528516 LIMS3P0CW19 117 aa16.63■□□□□ 0.25
LTBP3-210ENST00000528516 LIMS4P0CW20 117 aa16.63■□□□□ 0.25
LTBP3-210ENST00000528516 ARAFP10398 606 aa16.63■□□□□ 0.25
LTBP3-210ENST00000528516 PVALBP20472 110 aaPredicted RBP16.63■□□□□ 0.25
LTBP3-210ENST00000528516 MMP11P24347 488 aa16.63■□□□□ 0.25
LTBP3-210ENST00000528516 HMGA2P52926 109 aa16.63■□□□□ 0.25
LTBP3-210ENST00000528516 LSM11P83369 360 aaKnown RBP eCLIP16.63■□□□□ 0.252e-7■■□□□ 13.5
LTBP3-210ENST00000528516 PITPNAQ00169 270 aa16.63■□□□□ 0.25
LTBP3-210ENST00000528516 GAS6Q14393 721 aa16.63■□□□□ 0.25
LTBP3-210ENST00000528516 HES5Q5TA89 166 aa16.63■□□□□ 0.25
LTBP3-210ENST00000528516 ASPGQ86U10 573 aa16.63■□□□□ 0.25
LTBP3-210ENST00000528516 PRR22Q8IZ63 422 aa16.63■□□□□ 0.25
LTBP3-210ENST00000528516 CAMKVQ8NCB2 501 aa16.63■□□□□ 0.25
LTBP3-210ENST00000528516 PMM1Q92871 262 aa16.63■□□□□ 0.25
LTBP3-210ENST00000528516 INSM2Q96T92 566 aaPredicted RBP16.63■□□□□ 0.25
LTBP3-210ENST00000528516 SLC25A18Q9H1K4 315 aa16.63■□□□□ 0.25
LTBP3-210ENST00000528516 RCE1Q9Y256 329 aa16.63■□□□□ 0.25
LTBP3-210ENST00000528516 MEIS3P1A6NDR6 274 aa16.63■□□□□ 0.25
LTBP3-210ENST00000528516 CASC3O15234 703 aaKnown RBP16.63■□□□□ 0.25
LTBP3-210ENST00000528516 DOK2O60496 412 aa16.63■□□□□ 0.25
LTBP3-210ENST00000528516 ZDHHC11BP0C7U3 371 aa16.63■□□□□ 0.25
LTBP3-210ENST00000528516 SNRPBP14678 240 aaKnown RBP16.63■□□□□ 0.25
LTBP3-210ENST00000528516 PRLHRP49683 370 aa16.63■□□□□ 0.25
LTBP3-210ENST00000528516 CDK3Q00526 305 aa16.63■□□□□ 0.25
LTBP3-210ENST00000528516 GGTA1PQ4G0N0 100 aa16.63■□□□□ 0.25
LTBP3-210ENST00000528516 LIN54Q6MZP7 749 aa16.63■□□□□ 0.25
LTBP3-210ENST00000528516 CWH43Q9H720 699 aa16.63■□□□□ 0.25
LTBP3-210ENST00000528516 SEC61A2Q9H9S3 476 aa16.63■□□□□ 0.25
LTBP3-210ENST00000528516 PRDM9Q9NQV7 894 aa16.63■□□□□ 0.25
LTBP3-210ENST00000528516 COMMD9Q9P000 198 aa16.63■□□□□ 0.25
LTBP3-210ENST00000528516 FARSAQ9Y285 508 aaKnown RBP16.63■□□□□ 0.25
LTBP3-210ENST00000528516 AP1M2Q9Y6Q5 423 aa16.63■□□□□ 0.25
LTBP3-210ENST00000528516 TRPM6Q9BX84 2022 aa16.63■□□□□ 0.25
LTBP3-210ENST00000528516 TRBV2A0A0J9YWF9 115 aa16.63■□□□□ 0.25
LTBP3-210ENST00000528516 E9PQ18 207 aa16.63■□□□□ 0.25
LTBP3-210ENST00000528516 ABLIM3O94929 683 aa16.63■□□□□ 0.25
LTBP3-210ENST00000528516 CSTAP01040 98 aa16.63■□□□□ 0.25
LTBP3-210ENST00000528516 OPN1LWP04000 364 aa16.63■□□□□ 0.25
LTBP3-210ENST00000528516 ADRB1P08588 477 aa16.63■□□□□ 0.25
LTBP3-210ENST00000528516 OR5M10Q6IEU7 315 aa16.63■□□□□ 0.25
LTBP3-210ENST00000528516 RPTNQ6XPR3 784 aa16.63■□□□□ 0.25
LTBP3-210ENST00000528516 SDR9C7Q8NEX9 313 aa16.63■□□□□ 0.25
LTBP3-210ENST00000528516 SUN3Q8TAQ9 357 aa16.63■□□□□ 0.25
LTBP3-210ENST00000528516 ZDHHC1Q8WTX9 485 aa16.63■□□□□ 0.25
LTBP3-210ENST00000528516 OR2M4Q96R27 311 aa16.63■□□□□ 0.25
LTBP3-210ENST00000528516 ZSCAN32Q9NX65 697 aa16.63■□□□□ 0.25
LTBP3-210ENST00000528516 CYP8B1Q9UNU6 501 aa16.63■□□□□ 0.25
LTBP3-210ENST00000528516 ATG4BQ9Y4P1 393 aa16.63■□□□□ 0.25
LTBP3-210ENST00000528516 CDC14CA4D256 554 aa16.62■□□□□ 0.25
LTBP3-210ENST00000528516 PTP4A3O75365 173 aa16.62■□□□□ 0.25
LTBP3-210ENST00000528516 NMBP08949 121 aa16.62■□□□□ 0.25
LTBP3-210ENST00000528516 SULT1A3P0DMM9 295 aa16.62■□□□□ 0.25
LTBP3-210ENST00000528516 SULT1A4P0DMN0 295 aa16.62■□□□□ 0.25
LTBP3-210ENST00000528516 CD22P20273 847 aa16.62■□□□□ 0.25
LTBP3-210ENST00000528516 GK2Q14410 553 aaPredicted RBP16.62■□□□□ 0.25
LTBP3-210ENST00000528516 SFXN4Q6P4A7 337 aa16.62■□□□□ 0.25
LTBP3-210ENST00000528516 TECPR1Q7Z6L1 1165 aa16.62■□□□□ 0.25
LTBP3-210ENST00000528516 NRROSQ86YC3 692 aa16.62■□□□□ 0.25
LTBP3-210ENST00000528516 C2CD4CQ8TF44 421 aa16.62■□□□□ 0.25
LTBP3-210ENST00000528516 GCDHQ92947 438 aaPredicted RBP16.62■□□□□ 0.25
LTBP3-210ENST00000528516 HGDQ93099 445 aa16.62■□□□□ 0.25
LTBP3-210ENST00000528516 GPN1Q9HCN4 374 aaPredicted RBP16.62■□□□□ 0.25
LTBP3-210ENST00000528516 SLC23A2Q9UGH3 650 aa16.62■□□□□ 0.25
LTBP3-210ENST00000528516 GPR160Q9UJ42 338 aa16.62■□□□□ 0.25
LTBP3-210ENST00000528516 SH2B3Q9UQQ2 575 aa16.62■□□□□ 0.25
LTBP3-210ENST00000528516 VEGFDO43915 354 aa16.62■□□□□ 0.25
LTBP3-210ENST00000528516 MT-ND5P03915 603 aa16.62■□□□□ 0.25
LTBP3-210ENST00000528516 CLDN12P56749 244 aa16.62■□□□□ 0.25
LTBP3-210ENST00000528516 BTN2A1Q7KYR7 527 aa16.62■□□□□ 0.25
LTBP3-210ENST00000528516 SYT9Q86SS6 491 aa16.62■□□□□ 0.25
LTBP3-210ENST00000528516 GJD3Q8N144 294 aa16.62■□□□□ 0.25
LTBP3-210ENST00000528516 LRRC25Q8N386 305 aaPredicted RBP16.62■□□□□ 0.25
LTBP3-210ENST00000528516 SLC22A8Q8TCC7 542 aa16.62■□□□□ 0.25
LTBP3-210ENST00000528516 GNPDA2Q8TDQ7 276 aa16.62■□□□□ 0.25
LTBP3-210ENST00000528516 ATOH1Q92858 354 aaPredicted RBP16.62■□□□□ 0.25
LTBP3-210ENST00000528516 ZNF559Q9BR84 538 aa16.62■□□□□ 0.25
LTBP3-210ENST00000528516 LGR4Q9BXB1 951 aa16.62■□□□□ 0.25
LTBP3-210ENST00000528516 SF3B6Q9Y3B4 125 aaKnown RBP16.62■□□□□ 0.25
LTBP3-210ENST00000528516 KCNE1BA0A087WTH5 132 aa16.62■□□□□ 0.25
LTBP3-210ENST00000528516 TRABD2BA6NFA1 517 aa16.62■□□□□ 0.25
LTBP3-210ENST00000528516 F8W036 122 aa16.62■□□□□ 0.25
LTBP3-210ENST00000528516 PLPP1O14494 284 aa16.62■□□□□ 0.25
LTBP3-210ENST00000528516 SGCEO43556 437 aa16.62■□□□□ 0.25
LTBP3-210ENST00000528516 NDUFA2O43678 99 aa16.62■□□□□ 0.25
LTBP3-210ENST00000528516 APOC1P02654 83 aa16.62■□□□□ 0.25
LTBP3-210ENST00000528516 SLC7A9P82251 487 aa16.62■□□□□ 0.25
LTBP3-210ENST00000528516 PPP1R14AQ96A00 147 aa16.62■□□□□ 0.25
LTBP3-210ENST00000528516 SLC41A3Q96GZ6 507 aa16.62■□□□□ 0.25
LTBP3-210ENST00000528516 PTCHD1Q96NR3 888 aa16.62■□□□□ 0.25
LTBP3-210ENST00000528516 S100A13Q99584 98 aa16.62■□□□□ 0.25
LTBP3-210ENST00000528516 BRF2Q9HAW0 419 aa16.62■□□□□ 0.25
LTBP3-210ENST00000528516 GIMAP1-GIMAP5A0A087WTJ2 511 aa16.61■□□□□ 0.25
LTBP3-210ENST00000528516 H0YIV9 168 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms