RNA–Protein interactions for RNA: ENST00000527920.5

SSSCA1-205, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3 BASIC

Gene SSSCA1, Length 806 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-205ENST00000527920 THBS1P07996 1170 aa29.4■■■□□ 2.3
SSSCA1-205ENST00000527920 HNRNPCL4P0DMR1 293 aa29.4■■■□□ 2.3
SSSCA1-205ENST00000527920 SLC1A3P43003 542 aa29.4■■■□□ 2.3
SSSCA1-205ENST00000527920 EPS8Q12929 822 aa29.4■■■□□ 2.3
SSSCA1-205ENST00000527920 SQLEQ14534 574 aa29.4■■■□□ 2.3
SSSCA1-205ENST00000527920 POU4F3Q15319 338 aa29.4■■■□□ 2.3
SSSCA1-205ENST00000527920 NUFIP2Q7Z417 695 aaKnown RBP29.4■■■□□ 2.3
SSSCA1-205ENST00000527920 TMEM19Q96HH6 336 aa29.4■■■□□ 2.3
SSSCA1-205ENST00000527920 A4GALTQ9NPC4 353 aa29.4■■■□□ 2.3
SSSCA1-205ENST00000527920 CCDC167Q9P0B6 97 aa29.4■■■□□ 2.3
SSSCA1-205ENST00000527920 PLEKHA6Q9Y2H5 1048 aa29.4■■■□□ 2.3
SSSCA1-205ENST00000527920 IGHV3-15A0A0B4J1V0 119 aa29.39■■■□□ 2.3
SSSCA1-205ENST00000527920 A0A1W2PPR1 153 aa29.39■■■□□ 2.3
SSSCA1-205ENST00000527920 ZNF724A8MTY0 619 aa29.39■■■□□ 2.3
SSSCA1-205ENST00000527920 AP3D1O14617 1153 aa29.39■■■□□ 2.3
SSSCA1-205ENST00000527920 RAF1P04049 648 aa29.39■■■□□ 2.3
SSSCA1-205ENST00000527920 ZNF550Q7Z398 422 aa29.39■■■□□ 2.3
SSSCA1-205ENST00000527920 GABRG1Q8N1C3 465 aa29.39■■■□□ 2.3
SSSCA1-205ENST00000527920 RABEP2Q9H5N1 569 aa29.39■■■□□ 2.3
SSSCA1-205ENST00000527920 BCL2L10Q9HD36 194 aa29.39■■■□□ 2.3
SSSCA1-205ENST00000527920 NR5A2O00482 541 aa29.38■■■□□ 2.29
SSSCA1-205ENST00000527920 ZNF208O43345 1280 aa29.38■■■□□ 2.29
SSSCA1-205ENST00000527920 FESP07332 822 aa29.38■■■□□ 2.29
SSSCA1-205ENST00000527920 TFPIP10646 304 aa29.38■■■□□ 2.29
SSSCA1-205ENST00000527920 PPIBP23284 216 aaKnown RBP29.38■■■□□ 2.29
SSSCA1-205ENST00000527920 POLR2HP52434 150 aaKnown RBP29.38■■■□□ 2.29
SSSCA1-205ENST00000527920 RASGEF1BQ0VAM2 473 aa29.38■■■□□ 2.29
SSSCA1-205ENST00000527920 LARS2Q15031 903 aaKnown RBP29.38■■■□□ 2.29
SSSCA1-205ENST00000527920 PDK3Q15120 406 aa29.38■■■□□ 2.29
SSSCA1-205ENST00000527920 ABLIM2Q6H8Q1 611 aa29.38■■■□□ 2.29
SSSCA1-205ENST00000527920 MTDHQ86UE4 582 aaKnown RBP29.38■■■□□ 2.29
SSSCA1-205ENST00000527920 ZHX1-C8orf76Q96EF9 292 aa29.38■■■□□ 2.29
SSSCA1-205ENST00000527920 ALPK1Q96QP1 1244 aa29.38■■■□□ 2.29
SSSCA1-205ENST00000527920 SIKE1Q9BRV8 207 aa29.38■■■□□ 2.29
SSSCA1-205ENST00000527920 HDHD5Q9BXW7 423 aa29.38■■■□□ 2.29
SSSCA1-205ENST00000527920 SLC25A37Q9NYZ2 338 aa29.38■■■□□ 2.29
SSSCA1-205ENST00000527920 C6orf203Q9P0P8 240 aaPredicted RBP29.38■■■□□ 2.29
SSSCA1-205ENST00000527920 OSGIN1Q9UJX0 560 aa29.38■■■□□ 2.29
SSSCA1-205ENST00000527920 TRAPPC4Q9Y296 219 aa29.38■■■□□ 2.29
SSSCA1-205ENST00000527920 ZNF443Q9Y2A4 671 aaPredicted RBP29.38■■■□□ 2.29
SSSCA1-205ENST00000527920 ZNF836Q6ZNA1 936 aa29.37■■■□□ 2.29
SSSCA1-205ENST00000527920 VRK2Q86Y07 508 aa29.37■■■□□ 2.29
SSSCA1-205ENST00000527920 MSRB3Q8IXL7 192 aa29.37■■■□□ 2.29
SSSCA1-205ENST00000527920 ARL5BQ96KC2 179 aa29.37■■■□□ 2.29
SSSCA1-205ENST00000527920 ARMC7Q9H6L4 198 aa29.37■■■□□ 2.29
SSSCA1-205ENST00000527920 CACYBPQ9HB71 228 aaKnown RBP29.37■■■□□ 2.29
SSSCA1-205ENST00000527920 RLIMQ9NVW2 624 aa29.37■■■□□ 2.29
SSSCA1-205ENST00000527920 ZNF232Q9UNY5 417 aa29.37■■■□□ 2.29
SSSCA1-205ENST00000527920 IFT52Q9Y366 437 aa29.37■■■□□ 2.29
SSSCA1-205ENST00000527920 IGKV3D-15A0A087WSY6 115 aa29.36■■■□□ 2.29
SSSCA1-205ENST00000527920 TMED7-TICAM2A0A0A6YYA0 188 aa29.36■■■□□ 2.29
SSSCA1-205ENST00000527920 EDF1O60869 148 aaKnown RBP29.36■■■□□ 2.29
SSSCA1-205ENST00000527920 GCM2O75603 506 aaPredicted RBP29.36■■■□□ 2.29
SSSCA1-205ENST00000527920 ATE1O95260 518 aa29.36■■■□□ 2.29
SSSCA1-205ENST00000527920 ANKRD34AQ69YU3 496 aa29.36■■■□□ 2.29
SSSCA1-205ENST00000527920 C22orf34Q6ZV56 151 aa29.36■■■□□ 2.29
SSSCA1-205ENST00000527920 STEAP2Q8NFT2 490 aa29.36■■■□□ 2.29
SSSCA1-205ENST00000527920 ACTR6Q9GZN1 396 aa29.36■■■□□ 2.29
SSSCA1-205ENST00000527920 ADAM19Q9H013 955 aa29.36■■■□□ 2.29
SSSCA1-205ENST00000527920 TMED7Q9Y3B3 224 aa29.36■■■□□ 2.29
SSSCA1-205ENST00000527920 THBDP07204 575 aa29.35■■■□□ 2.29
SSSCA1-205ENST00000527920 TACR3P29371 465 aa29.35■■■□□ 2.29
SSSCA1-205ENST00000527920 OR3A2P47893 321 aa29.35■■■□□ 2.29
SSSCA1-205ENST00000527920 KEAP1Q14145 624 aa29.35■■■□□ 2.29
SSSCA1-205ENST00000527920 P2RY6Q15077 328 aa29.35■■■□□ 2.29
SSSCA1-205ENST00000527920 AGKQ53H12 422 aa29.35■■■□□ 2.29
SSSCA1-205ENST00000527920 BBS10Q8TAM1 723 aa29.35■■■□□ 2.29
SSSCA1-205ENST00000527920 SLC35B4Q969S0 331 aa29.35■■■□□ 2.29
SSSCA1-205ENST00000527920 DDIT4LQ96D03 193 aa29.35■■■□□ 2.29
SSSCA1-205ENST00000527920 SPATA9Q9BWV2 254 aa29.35■■■□□ 2.29
SSSCA1-205ENST00000527920 OR11A1Q9GZK7 315 aa29.35■■■□□ 2.29
SSSCA1-205ENST00000527920 TRBV5-3A0A0A0MS03 114 aa29.34■■■□□ 2.29
SSSCA1-205ENST00000527920 A0A1W2PP18 115 aa29.34■■■□□ 2.29
SSSCA1-205ENST00000527920 NUDT7P0C024 238 aa29.34■■■□□ 2.29
SSSCA1-205ENST00000527920 KLK2P20151 261 aa29.34■■■□□ 2.29
SSSCA1-205ENST00000527920 ACAA2P42765 397 aaKnown RBP29.34■■■□□ 2.29
SSSCA1-205ENST00000527920 RPS26P11Q5JNZ5 115 aaPredicted RBP29.34■■■□□ 2.29
SSSCA1-205ENST00000527920 PAGE3Q5JUK9 113 aa29.34■■■□□ 2.29
SSSCA1-205ENST00000527920 PIK3IP1Q96FE7 263 aa29.34■■■□□ 2.29
SSSCA1-205ENST00000527920 ZC3HAV1LQ96H79 300 aaKnown RBP29.34■■■□□ 2.29
SSSCA1-205ENST00000527920 USB1Q9BQ65 265 aaKnown RBP29.34■■■□□ 2.29
SSSCA1-205ENST00000527920 EMC3Q9P0I2 261 aa29.34■■■□□ 2.29
SSSCA1-205ENST00000527920 SLAMF8Q9P0V8 285 aa29.34■■■□□ 2.29
SSSCA1-205ENST00000527920 TMEM181Q9P2C4 612 aa29.34■■■□□ 2.29
SSSCA1-205ENST00000527920 TRIM33Q9UPN9 1127 aa29.34■■■□□ 2.29
SSSCA1-205ENST00000527920 CNOT4O95628 575 aaKnown RBP29.33■■■□□ 2.29
SSSCA1-205ENST00000527920 LOXP28300 417 aaPredicted RBP29.33■■■□□ 2.29
SSSCA1-205ENST00000527920 Q6ZT83 130 aa29.33■■■□□ 2.29
SSSCA1-205ENST00000527920 CXorf67Q86X51 503 aaPredicted RBP29.33■■■□□ 2.29
SSSCA1-205ENST00000527920 PIGXQ8TBF5 258 aa29.33■■■□□ 2.29
SSSCA1-205ENST00000527920 ZNF385DQ9H6B1 395 aa29.33■■■□□ 2.29
SSSCA1-205ENST00000527920 VAPAQ9P0L0 249 aa29.33■■■□□ 2.29
SSSCA1-205ENST00000527920 CORO2BQ9UQ03 480 aa29.33■■■□□ 2.29
SSSCA1-205ENST00000527920 ETS2P15036 469 aa29.32■■■□□ 2.28
SSSCA1-205ENST00000527920 SLC16A1P53985 500 aa29.32■■■□□ 2.28
SSSCA1-205ENST00000527920 H3F3AP84243 136 aa29.32■■■□□ 2.28
SSSCA1-205ENST00000527920 BEX5Q5H9J7 111 aa29.32■■■□□ 2.28
SSSCA1-205ENST00000527920 SFRP5Q5T4F7 317 aa29.32■■■□□ 2.28
SSSCA1-205ENST00000527920 GALNT5Q7Z7M9 940 aa29.32■■■□□ 2.28
SSSCA1-205ENST00000527920 MAL2Q969L2 176 aa29.32■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms