RNA–Protein interactions for RNA: ENST00000526696.6

SSRP1-203, Transcript of structure specific recognition protein 1, humanhuman

TSL 3

Gene SSRP1, Length 948 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-203ENST00000526696 RSPO3Q9BXY4 272 aaPredicted RBP11.57□□□□□ -0.56
SSRP1-203ENST00000526696 CPSF2Q9P2I0 782 aaKnown RBP11.57□□□□□ -0.56
SSRP1-203ENST00000526696 VPS29Q9UBQ0 182 aa11.57□□□□□ -0.56
SSRP1-203ENST00000526696 UPB1Q9UBR1 384 aa11.57□□□□□ -0.56
SSRP1-203ENST00000526696 ZNF225Q9UK10 706 aa11.57□□□□□ -0.56
SSRP1-203ENST00000526696 TNPO3Q9Y5L0 923 aaKnown RBP11.57□□□□□ -0.56
SSRP1-203ENST00000526696 NUP214P35658 2090 aaPredicted RBP11.56□□□□□ -0.56
SSRP1-203ENST00000526696 GNG14A0A1W2PPG7 69 aa11.56□□□□□ -0.56
SSRP1-203ENST00000526696 CCDC151A5D8V7 595 aa11.56□□□□□ -0.56
SSRP1-203ENST00000526696 NR5A2O00482 541 aa11.56□□□□□ -0.56
SSRP1-203ENST00000526696 GPR171O14626 319 aa11.56□□□□□ -0.56
SSRP1-203ENST00000526696 TIMM23O14925 209 aa11.56□□□□□ -0.56
SSRP1-203ENST00000526696 DDCP20711 480 aa11.56□□□□□ -0.56
SSRP1-203ENST00000526696 SUMO3P55854 103 aaPredicted RBP11.56□□□□□ -0.56
SSRP1-203ENST00000526696 TGFBR3Q03167 851 aa11.56□□□□□ -0.56
SSRP1-203ENST00000526696 PDIA2Q13087 525 aaKnown RBP11.56□□□□□ -0.56
SSRP1-203ENST00000526696 QPRTQ15274 297 aa11.56□□□□□ -0.56
SSRP1-203ENST00000526696 TIGD2Q4W5G0 525 aa11.56□□□□□ -0.56
SSRP1-203ENST00000526696 KPRPQ5T749 579 aaPredicted RBP11.56□□□□□ -0.56
SSRP1-203ENST00000526696 METTL2BQ6P1Q9 378 aaKnown RBP11.56□□□□□ -0.56
SSRP1-203ENST00000526696 SPATC1Q76KD6 591 aa11.56□□□□□ -0.56
SSRP1-203ENST00000526696 LRRC8AQ8IWT6 810 aa11.56□□□□□ -0.56
SSRP1-203ENST00000526696 PTGR2Q8N8N7 351 aaPredicted RBP11.56□□□□□ -0.56
SSRP1-203ENST00000526696 OR6Y1Q8NGX8 325 aa11.56□□□□□ -0.56
SSRP1-203ENST00000526696 ACTRT1Q8TDG2 376 aa11.56□□□□□ -0.56
SSRP1-203ENST00000526696 JADE3Q92613 823 aa11.56□□□□□ -0.56
SSRP1-203ENST00000526696 APIPQ96GX9 242 aa11.56□□□□□ -0.56
SSRP1-203ENST00000526696 GPR78Q96P69 363 aa11.56□□□□□ -0.56
SSRP1-203ENST00000526696 EBPLQ9BY08 206 aa11.56□□□□□ -0.56
SSRP1-203ENST00000526696 PPP2R2CQ9Y2T4 447 aa11.56□□□□□ -0.56
SSRP1-203ENST00000526696 FLVCR1Q9Y5Y0 555 aa11.56□□□□□ -0.56
SSRP1-203ENST00000526696 SOX21Q9Y651 276 aaPredicted RBP11.56□□□□□ -0.56
SSRP1-203ENST00000526696 SLC22A31A6NKX4 558 aa11.55□□□□□ -0.56
SSRP1-203ENST00000526696 E7ESA3 106 aa11.55□□□□□ -0.56
SSRP1-203ENST00000526696 SSTR1P30872 391 aa11.55□□□□□ -0.56
SSRP1-203ENST00000526696 SEC24CP53992 1094 aa11.55□□□□□ -0.56
SSRP1-203ENST00000526696 CSNK2A1P68400 391 aaPredicted RBP11.55□□□□□ -0.56
SSRP1-203ENST00000526696 KLHL26Q53HC5 615 aa11.55□□□□□ -0.56
SSRP1-203ENST00000526696 AVPI1Q5T686 147 aa11.55□□□□□ -0.56
SSRP1-203ENST00000526696 SAXO2Q658L1 398 aa11.55□□□□□ -0.56
SSRP1-203ENST00000526696 ZNF551Q7Z340 670 aaPredicted RBP11.55□□□□□ -0.56
SSRP1-203ENST00000526696 MTERF4Q7Z6M4 381 aaKnown RBP11.55□□□□□ -0.56
SSRP1-203ENST00000526696 ARL5BQ96KC2 179 aa11.55□□□□□ -0.56
SSRP1-203ENST00000526696 ANKRD27Q96NW4 1050 aa11.55□□□□□ -0.56
SSRP1-203ENST00000526696 MRPL37Q9BZE1 423 aaKnown RBP11.55□□□□□ -0.56
SSRP1-203ENST00000526696 NELFAQ9H3P2 528 aa11.55□□□□□ -0.56
SSRP1-203ENST00000526696 OBP2BQ9NPH6 170 aa11.55□□□□□ -0.56
SSRP1-203ENST00000526696 TAS2R7Q9NYW3 318 aa11.55□□□□□ -0.56
SSRP1-203ENST00000526696 REV1Q9UBZ9 1251 aa11.55□□□□□ -0.56
SSRP1-203ENST00000526696 IGHV2OR16-5A0A0B4J2B6 119 aa11.54□□□□□ -0.56
SSRP1-203ENST00000526696 OR6C65A6NJZ3 312 aa11.54□□□□□ -0.56
SSRP1-203ENST00000526696 SYNGR3O43761 229 aa11.54□□□□□ -0.56
SSRP1-203ENST00000526696 IGKV3-15P01624 115 aa11.54□□□□□ -0.56
SSRP1-203ENST00000526696 IGHV2-5P01817 119 aa11.54□□□□□ -0.56
SSRP1-203ENST00000526696 PRPS2P11908 318 aa11.54□□□□□ -0.56
SSRP1-203ENST00000526696 TSPAN8P19075 237 aa11.54□□□□□ -0.56
SSRP1-203ENST00000526696 TYK2P29597 1187 aa11.54□□□□□ -0.56
SSRP1-203ENST00000526696 LCN1P31025 176 aa11.54□□□□□ -0.56
SSRP1-203ENST00000526696 TIA1P31483 386 aaKnown RBP eCLIP11.54□□□□□ -0.56
SSRP1-203ENST00000526696 ALDH3B1P43353 468 aa11.54□□□□□ -0.56
SSRP1-203ENST00000526696 ARL4CP56559 192 aa11.54□□□□□ -0.56
SSRP1-203ENST00000526696 RELBQ01201 579 aa11.54□□□□□ -0.56
SSRP1-203ENST00000526696 C3orf36Q3SXR2 165 aa11.54□□□□□ -0.56
SSRP1-203ENST00000526696 SYT14P1Q58G82 188 aa11.54□□□□□ -0.56
SSRP1-203ENST00000526696 EXOSC6Q5RKV6 272 aaKnown RBP11.54□□□□□ -0.56
SSRP1-203ENST00000526696 C16orf87Q6PH81 154 aa11.54□□□□□ -0.56
SSRP1-203ENST00000526696 LRIG3Q6UXM1 1119 aa11.54□□□□□ -0.56
SSRP1-203ENST00000526696 MMGT1Q8N4V1 131 aa11.54□□□□□ -0.56
SSRP1-203ENST00000526696 CDRT4Q8N9R6 151 aa11.54□□□□□ -0.56
SSRP1-203ENST00000526696 OR1K1Q8NGR3 316 aa11.54□□□□□ -0.56
SSRP1-203ENST00000526696 RFWD2Q8NHY2 731 aa11.54□□□□□ -0.56
SSRP1-203ENST00000526696 FAM110DQ8TAY7 271 aaPredicted RBP11.54□□□□□ -0.56
SSRP1-203ENST00000526696 PIGXQ8TBF5 258 aa11.54□□□□□ -0.56
SSRP1-203ENST00000526696 ANP32BQ92688 251 aaKnown RBP11.54□□□□□ -0.56
SSRP1-203ENST00000526696 BCL2L2Q92843 193 aaPredicted RBP11.54□□□□□ -0.56
SSRP1-203ENST00000526696 PHF21BQ96EK2 531 aa11.54□□□□□ -0.56
SSRP1-203ENST00000526696 C16orf58Q96GQ5 468 aa11.54□□□□□ -0.56
SSRP1-203ENST00000526696 ACPTQ9BZG2 426 aa11.54□□□□□ -0.56
SSRP1-203ENST00000526696 SHCBP1LQ9BZQ2 653 aa11.54□□□□□ -0.56
SSRP1-203ENST00000526696 GIN1Q9NXP7 522 aa11.54□□□□□ -0.56
SSRP1-203ENST00000526696 PLEK2Q9NYT0 353 aa11.54□□□□□ -0.56
SSRP1-203ENST00000526696 NUP50Q9UKX7 468 aa11.54□□□□□ -0.56
SSRP1-203ENST00000526696 GRID1Q9ULK0 1009 aa11.54□□□□□ -0.56
SSRP1-203ENST00000526696 ARPC4-TTLL3A0A0A6YYG9 625 aa11.53□□□□□ -0.56
SSRP1-203ENST00000526696 A0A1B0GUS0 222 aa11.53□□□□□ -0.56
SSRP1-203ENST00000526696 FAM159BA6NKW6 160 aa11.53□□□□□ -0.56
SSRP1-203ENST00000526696 C3orf80F5H4A9 247 aa11.53□□□□□ -0.56
SSRP1-203ENST00000526696 M0R233 179 aa11.53□□□□□ -0.56
SSRP1-203ENST00000526696 MANBAO00462 879 aa11.53□□□□□ -0.56
SSRP1-203ENST00000526696 LGI1O95970 557 aa11.53□□□□□ -0.56
SSRP1-203ENST00000526696 GSNP06396 782 aa11.53□□□□□ -0.56
SSRP1-203ENST00000526696 GATA3P23771 443 aa11.53□□□□□ -0.56
SSRP1-203ENST00000526696 CRABP2P29373 138 aa11.53□□□□□ -0.56
SSRP1-203ENST00000526696 PRKAG1P54619 331 aa11.53□□□□□ -0.56
SSRP1-203ENST00000526696 H3F3AP84243 136 aa11.53□□□□□ -0.56
SSRP1-203ENST00000526696 MVKQ03426 396 aa11.53□□□□□ -0.56
SSRP1-203ENST00000526696 C2orf80Q0P641 193 aa11.53□□□□□ -0.56
SSRP1-203ENST00000526696 VPS26BQ4G0F5 336 aa11.53□□□□□ -0.56
SSRP1-203ENST00000526696 ATP6AP1LQ52LC2 224 aa11.53□□□□□ -0.56
SSRP1-203ENST00000526696 OLFML2AQ68BL7 652 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms