RNA–Protein interactions for RNA: ENST00000525504.5

CCDC90B-204, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 1,232 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-204ENST00000525504 PMM1Q92871 262 aa5.29□□□□□ -1.56
CCDC90B-204ENST00000525504 CPNE4Q96A23 557 aaPredicted RBP5.29□□□□□ -1.56
CCDC90B-204ENST00000525504 ZG16BQ96DA0 208 aa5.29□□□□□ -1.56
CCDC90B-204ENST00000525504 NEURL3Q96EH8 262 aa5.29□□□□□ -1.56
CCDC90B-204ENST00000525504 OTUB1Q96FW1 271 aaPredicted RBP5.29□□□□□ -1.56
CCDC90B-204ENST00000525504 SH3YL1Q96HL8 342 aaPredicted RBP5.29□□□□□ -1.56
CCDC90B-204ENST00000525504 PKNOX2Q96KN3 472 aa5.29□□□□□ -1.56
CCDC90B-204ENST00000525504 CCDC115Q96NT0 180 aa5.29□□□□□ -1.56
CCDC90B-204ENST00000525504 OR7D2Q96RA2 312 aa5.29□□□□□ -1.56
CCDC90B-204ENST00000525504 MED18Q9BUE0 208 aa5.29□□□□□ -1.56
CCDC90B-204ENST00000525504 SRXN1Q9BYN0 137 aa5.29□□□□□ -1.56
CCDC90B-204ENST00000525504 PRRG4Q9BZD6 226 aa5.29□□□□□ -1.56
CCDC90B-204ENST00000525504 COQ10BQ9H8M1 238 aa5.29□□□□□ -1.56
CCDC90B-204ENST00000525504 MEAF6Q9HAF1 191 aa5.29□□□□□ -1.56
CCDC90B-204ENST00000525504 BCO1Q9HAY6 547 aa5.29□□□□□ -1.56
CCDC90B-204ENST00000525504 FANCFQ9NPI8 374 aa5.29□□□□□ -1.56
CCDC90B-204ENST00000525504 ACER3Q9NUN7 267 aa5.29□□□□□ -1.56
CCDC90B-204ENST00000525504 ZNF701Q9NV72 531 aaPredicted RBP5.29□□□□□ -1.56
CCDC90B-204ENST00000525504 C6orf203Q9P0P8 240 aaPredicted RBP5.29□□□□□ -1.56
CCDC90B-204ENST00000525504 KLHL13Q9P2N7 655 aa5.29□□□□□ -1.56
CCDC90B-204ENST00000525504 BTNL2Q9UIR0 455 aa5.29□□□□□ -1.56
CCDC90B-204ENST00000525504 ZANQ9Y493 2812 aa5.29□□□□□ -1.56
CCDC90B-204ENST00000525504 PHF3Q92576 2039 aaKnown RBP5.29□□□□□ -1.56
CCDC90B-204ENST00000525504 NPIPA5A0A0B4J1W7 369 aa5.28□□□□□ -1.56
CCDC90B-204ENST00000525504 CENPVL1A0A0U1RR11 272 aa5.28□□□□□ -1.56
CCDC90B-204ENST00000525504 RNF103-CHMP3A0A140T963 221 aa5.28□□□□□ -1.56
CCDC90B-204ENST00000525504 WDR91A4D1P6 747 aa5.28□□□□□ -1.56
CCDC90B-204ENST00000525504 ZNF724A8MTY0 619 aa5.28□□□□□ -1.56
CCDC90B-204ENST00000525504 ZNF814B7Z6K7 855 aa5.28□□□□□ -1.56
CCDC90B-204ENST00000525504 NPIPA7E9PJI5 369 aa5.28□□□□□ -1.56
CCDC90B-204ENST00000525504 GTPBP1O00178 669 aaKnown RBP5.28□□□□□ -1.56
CCDC90B-204ENST00000525504 CFLARO15519 480 aa5.28□□□□□ -1.56
CCDC90B-204ENST00000525504 ARHGEF9O43307 516 aa5.28□□□□□ -1.56
CCDC90B-204ENST00000525504 GMFGO60234 142 aa5.28□□□□□ -1.56
CCDC90B-204ENST00000525504 KIAA0513O60268 411 aa5.28□□□□□ -1.56
CCDC90B-204ENST00000525504 SNNO75324 88 aaPredicted RBP5.28□□□□□ -1.56
CCDC90B-204ENST00000525504 PRKD3O94806 890 aa5.28□□□□□ -1.56
CCDC90B-204ENST00000525504 CNOT4O95628 575 aaKnown RBP5.28□□□□□ -1.56
CCDC90B-204ENST00000525504 PLGP00747 810 aaPredicted RBP5.28□□□□□ -1.56
CCDC90B-204ENST00000525504 YES1P07947 543 aa5.28□□□□□ -1.56
CCDC90B-204ENST00000525504 NPIPA8P0DM63 369 aa5.28□□□□□ -1.56
CCDC90B-204ENST00000525504 LBPP18428 481 aa5.28□□□□□ -1.56
CCDC90B-204ENST00000525504 BGNP21810 368 aa5.28□□□□□ -1.56
CCDC90B-204ENST00000525504 ENPP1P22413 925 aa5.28□□□□□ -1.56
CCDC90B-204ENST00000525504 AGTR1P30556 359 aa5.28□□□□□ -1.56
CCDC90B-204ENST00000525504 PGM1P36871 562 aa5.28□□□□□ -1.56
CCDC90B-204ENST00000525504 CLK1P49759 484 aaKnown RBP5.28□□□□□ -1.56
CCDC90B-204ENST00000525504 NR1H2P55055 460 aa5.28□□□□□ -1.56
CCDC90B-204ENST00000525504 SESN3P58005 492 aa5.28□□□□□ -1.56
CCDC90B-204ENST00000525504 NKX6-1P78426 367 aaPredicted RBP5.28□□□□□ -1.56
CCDC90B-204ENST00000525504 H3F3AP84243 136 aa5.28□□□□□ -1.56
CCDC90B-204ENST00000525504 BST1Q10588 318 aa5.28□□□□□ -1.56
CCDC90B-204ENST00000525504 SELENBP1Q13228 472 aa5.28□□□□□ -1.56
CCDC90B-204ENST00000525504 PDK3Q15120 406 aa5.28□□□□□ -1.56
CCDC90B-204ENST00000525504 QPRTQ15274 297 aa5.28□□□□□ -1.56
CCDC90B-204ENST00000525504 ZNF239Q16600 458 aaKnown RBP5.28□□□□□ -1.56
CCDC90B-204ENST00000525504 DPY19L1Q2PZI1 675 aa5.28□□□□□ -1.56
CCDC90B-204ENST00000525504 SPANXN4Q5MJ08 99 aa5.28□□□□□ -1.56
CCDC90B-204ENST00000525504 PDZK1Q5T2W1 519 aa5.28□□□□□ -1.56
CCDC90B-204ENST00000525504 OR4F3Q6IEY1 312 aa5.28□□□□□ -1.56
CCDC90B-204ENST00000525504 TYW3Q6IPR3 259 aaKnown RBP5.28□□□□□ -1.56
CCDC90B-204ENST00000525504 TFAP2EQ6VUC0 442 aa5.28□□□□□ -1.56
CCDC90B-204ENST00000525504 TMPPEQ6ZT21 453 aa5.28□□□□□ -1.56
CCDC90B-204ENST00000525504 EIF3MQ7L2H7 374 aaKnown RBP5.28□□□□□ -1.56
CCDC90B-204ENST00000525504 FCRLAQ7L513 359 aa5.28□□□□□ -1.56
CCDC90B-204ENST00000525504 ZNF550Q7Z398 422 aa5.28□□□□□ -1.56
CCDC90B-204ENST00000525504 NUFIP2Q7Z417 695 aaKnown RBP5.28□□□□□ -1.56
CCDC90B-204ENST00000525504 SZRD1Q7Z422 152 aa5.28□□□□□ -1.56
CCDC90B-204ENST00000525504 SPATA19Q7Z5L4 167 aa5.28□□□□□ -1.56
CCDC90B-204ENST00000525504 BIVMQ86UB2 503 aa5.28□□□□□ -1.56
CCDC90B-204ENST00000525504 STK32CQ86UX6 486 aa5.28□□□□□ -1.56
CCDC90B-204ENST00000525504 TUSC5Q8IXB3 177 aa5.28□□□□□ -1.56
CCDC90B-204ENST00000525504 STEAP2Q8NFT2 490 aa5.28□□□□□ -1.56
CCDC90B-204ENST00000525504 OR5D16Q8NGK9 328 aa5.28□□□□□ -1.56
CCDC90B-204ENST00000525504 ABHD3Q8WU67 409 aa5.28□□□□□ -1.56
CCDC90B-204ENST00000525504 XAGE5Q8WWM1 108 aa5.28□□□□□ -1.56
CCDC90B-204ENST00000525504 ROBO4Q8WZ75 1007 aa5.28□□□□□ -1.56
CCDC90B-204ENST00000525504 HSD17B8Q92506 261 aa5.28□□□□□ -1.56
CCDC90B-204ENST00000525504 ARL8AQ96BM9 186 aa5.28□□□□□ -1.56
CCDC90B-204ENST00000525504 TEX37Q96LM6 180 aa5.28□□□□□ -1.56
CCDC90B-204ENST00000525504 TACO1Q9BSH4 297 aaKnown RBP5.28□□□□□ -1.56
CCDC90B-204ENST00000525504 CCDC106Q9BWC9 280 aa5.28□□□□□ -1.56
CCDC90B-204ENST00000525504 DPY30Q9C005 99 aa5.28□□□□□ -1.56
CCDC90B-204ENST00000525504 TMEM185BQ9H7F4 350 aa5.28□□□□□ -1.56
CCDC90B-204ENST00000525504 EXOSC3Q9NQT5 275 aaKnown RBP5.28□□□□□ -1.56
CCDC90B-204ENST00000525504 EXD2Q9NVH0 621 aa5.28□□□□□ -1.56
CCDC90B-204ENST00000525504 PNPOQ9NVS9 261 aa5.28□□□□□ -1.56
CCDC90B-204ENST00000525504 THAP1Q9NVV9 213 aa5.28□□□□□ -1.56
CCDC90B-204ENST00000525504 CLEC4AQ9UMR7 237 aa5.28□□□□□ -1.56
CCDC90B-204ENST00000525504 PCDHGB4Q9UN71 923 aa5.28□□□□□ -1.56
CCDC90B-204ENST00000525504 LIPT1Q9Y234 373 aa5.28□□□□□ -1.56
CCDC90B-204ENST00000525504 GPR45Q9Y5Y3 372 aa5.28□□□□□ -1.56
CCDC90B-204ENST00000525504 STAB1Q9NY15 2570 aa5.28□□□□□ -1.56
CCDC90B-204ENST00000525504 MPDZO75970 2070 aa5.27□□□□□ -1.57
CCDC90B-204ENST00000525504 FN1P02751 2386 aaKnown RBP5.27□□□□□ -1.57
CCDC90B-204ENST00000525504 IGKV3D-15A0A087WSY6 115 aa5.27□□□□□ -1.57
CCDC90B-204ENST00000525504 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP5.27□□□□□ -1.57
CCDC90B-204ENST00000525504 AGAP5A6NIR3 686 aa5.27□□□□□ -1.57
CCDC90B-204ENST00000525504 FAAHO00519 579 aa5.27□□□□□ -1.57
CCDC90B-204ENST00000525504 SDHDO14521 159 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms