RNA–Protein interactions for RNA: ENST00000524652.1

CSDE1-208, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-208ENST00000524652 SNX7Q9UNH6 387 aa2.69□□□□□ -1.98
CSDE1-208ENST00000524652 EXO1Q9UQ84 846 aaKnown RBP2.69□□□□□ -1.98
CSDE1-208ENST00000524652 CARD8Q9Y2G2 431 aa2.69□□□□□ -1.98
CSDE1-208ENST00000524652 DLGAP4Q9Y2H0 992 aa2.69□□□□□ -1.98
CSDE1-208ENST00000524652 NAALAD2Q9Y3Q0 740 aa2.69□□□□□ -1.98
CSDE1-208ENST00000524652 POLR3HQ9Y535 204 aaPredicted RBP2.69□□□□□ -1.98
CSDE1-208ENST00000524652 ASB4Q9Y574 426 aa2.69□□□□□ -1.98
CSDE1-208ENST00000524652 ANGPTL3Q9Y5C1 460 aa2.69□□□□□ -1.98
CSDE1-208ENST00000524652 PKD1L1Q8TDX9 2849 aa2.69□□□□□ -1.98
CSDE1-208ENST00000524652 FN1P02751 2386 aaKnown RBP2.69□□□□□ -1.98
CSDE1-208ENST00000524652 CSMD1Q96PZ7 3565 aa2.69□□□□□ -1.98
CSDE1-208ENST00000524652 VPS13CQ709C8 3753 aa2.69□□□□□ -1.98
CSDE1-208ENST00000524652 IGLV3-12A0A075B6K2 115 aa2.68□□□□□ -1.98
CSDE1-208ENST00000524652 A0A0A6YYD5 115 aa2.68□□□□□ -1.98
CSDE1-208ENST00000524652 A0A1B0GU03 582 aa2.68□□□□□ -1.98
CSDE1-208ENST00000524652 A0A1B0GX78 115 aa2.68□□□□□ -1.98
CSDE1-208ENST00000524652 VSTM2BA6NLU5 285 aa2.68□□□□□ -1.98
CSDE1-208ENST00000524652 TMX2-CTNND1H3BSU7 103 aa2.68□□□□□ -1.98
CSDE1-208ENST00000524652 ANKRD28O15084 1053 aa2.68□□□□□ -1.98
CSDE1-208ENST00000524652 POLR3GO15318 223 aaPredicted RBP2.68□□□□□ -1.98
CSDE1-208ENST00000524652 NVLO15381 856 aaKnown RBP2.68□□□□□ -1.98
CSDE1-208ENST00000524652 CHST10O43529 356 aa2.68□□□□□ -1.98
CSDE1-208ENST00000524652 PEX11AO75192 247 aa2.68□□□□□ -1.98
CSDE1-208ENST00000524652 ALOX12BO75342 701 aa2.68□□□□□ -1.98
CSDE1-208ENST00000524652 CDC123O75794 336 aaPredicted RBP2.68□□□□□ -1.98
CSDE1-208ENST00000524652 SCELO95171 688 aa2.68□□□□□ -1.98
CSDE1-208ENST00000524652 BMP10O95393 424 aa2.68□□□□□ -1.98
CSDE1-208ENST00000524652 NSA2O95478 260 aaKnown RBP2.68□□□□□ -1.98
CSDE1-208ENST00000524652 HSPA4LO95757 839 aa2.68□□□□□ -1.98
CSDE1-208ENST00000524652 MLYCDO95822 493 aa2.68□□□□□ -1.98
CSDE1-208ENST00000524652 AIFM1O95831 613 aa2.68□□□□□ -1.98
CSDE1-208ENST00000524652 C1QCP02747 245 aa2.68□□□□□ -1.98
CSDE1-208ENST00000524652 KLK1P06870 262 aa2.68□□□□□ -1.98
CSDE1-208ENST00000524652 SLC35G6P0C7Q6 338 aa2.68□□□□□ -1.98
CSDE1-208ENST00000524652 LIPCP11150 499 aa2.68□□□□□ -1.98
CSDE1-208ENST00000524652 LIFP15018 202 aa2.68□□□□□ -1.98
CSDE1-208ENST00000524652 DDX5P17844 614 aaKnown RBP2.68□□□□□ -1.98
CSDE1-208ENST00000524652 ALOX12P18054 663 aa2.68□□□□□ -1.98
CSDE1-208ENST00000524652 SDC1P18827 310 aa2.68□□□□□ -1.98
CSDE1-208ENST00000524652 HIST1H1TP22492 207 aaPredicted RBP2.68□□□□□ -1.98
CSDE1-208ENST00000524652 HRH2P25021 359 aa2.68□□□□□ -1.98
CSDE1-208ENST00000524652 CXCR2P25025 360 aa2.68□□□□□ -1.98
CSDE1-208ENST00000524652 ATP5A1P25705 553 aaKnown RBP2.68□□□□□ -1.98
CSDE1-208ENST00000524652 IL12AP29459 219 aa2.68□□□□□ -1.98
CSDE1-208ENST00000524652 PPP2R1BP30154 601 aa2.68□□□□□ -1.98
CSDE1-208ENST00000524652 TIA1P31483 386 aaKnown RBP eCLIP2.68□□□□□ -1.984e-7■■■□□ 15
CSDE1-208ENST00000524652 SERPINB5P36952 375 aa2.68□□□□□ -1.98
CSDE1-208ENST00000524652 ARL1P40616 181 aaPredicted RBP2.68□□□□□ -1.98
CSDE1-208ENST00000524652 EIF2S3P41091 472 aaKnown RBP2.68□□□□□ -1.98
CSDE1-208ENST00000524652 XCR1P46094 333 aa2.68□□□□□ -1.98
CSDE1-208ENST00000524652 RPL14P50914 215 aaKnown RBP2.68□□□□□ -1.98
CSDE1-208ENST00000524652 DIO3P55073 304 aa2.68□□□□□ -1.98
CSDE1-208ENST00000524652 LIM2P55344 173 aa2.68□□□□□ -1.98
CSDE1-208ENST00000524652 RAB38P57729 211 aa2.68□□□□□ -1.98
CSDE1-208ENST00000524652 NAA20P61599 178 aa2.68□□□□□ -1.98
CSDE1-208ENST00000524652 RPL38P63173 70 aaKnown RBP2.68□□□□□ -1.98
CSDE1-208ENST00000524652 BTN3A2P78410 334 aa2.68□□□□□ -1.98
CSDE1-208ENST00000524652 BTG2P78543 158 aa2.68□□□□□ -1.98
CSDE1-208ENST00000524652 KLC1Q07866 573 aa2.68□□□□□ -1.98
CSDE1-208ENST00000524652 CSTF3Q12996 717 aaKnown RBP2.68□□□□□ -1.98
CSDE1-208ENST00000524652 IFT88Q13099 833 aa2.68□□□□□ -1.98
CSDE1-208ENST00000524652 CUL3Q13618 768 aa2.68□□□□□ -1.98
CSDE1-208ENST00000524652 FAM53BQ14153 422 aa2.68□□□□□ -1.98
CSDE1-208ENST00000524652 IL11RAQ14626 422 aa2.68□□□□□ -1.98
CSDE1-208ENST00000524652 KRT72Q14CN4 511 aa2.68□□□□□ -1.98
CSDE1-208ENST00000524652 NKAIN1Q4KMZ8 207 aa2.68□□□□□ -1.98
CSDE1-208ENST00000524652 C14orf177Q52M58 125 aa2.68□□□□□ -1.98
CSDE1-208ENST00000524652 PAGE2BQ5JRK9 111 aa2.68□□□□□ -1.98
CSDE1-208ENST00000524652 TCTE1Q5JU00 501 aa2.68□□□□□ -1.98
CSDE1-208ENST00000524652 CFAP157Q5JU67 520 aa2.68□□□□□ -1.98
CSDE1-208ENST00000524652 C6orf136Q5SQH8 315 aa2.68□□□□□ -1.98
CSDE1-208ENST00000524652 DCAF12Q5T6F0 453 aa2.68□□□□□ -1.98
CSDE1-208ENST00000524652 SERTAD4-AS1Q5TG53 156 aa2.68□□□□□ -1.98
CSDE1-208ENST00000524652 GARNL3Q5VVW2 1013 aa2.68□□□□□ -1.98
CSDE1-208ENST00000524652 TMEM198Q66K66 360 aa2.68□□□□□ -1.98
CSDE1-208ENST00000524652 ATG16L1Q676U5 607 aa2.68□□□□□ -1.98
CSDE1-208ENST00000524652 OR4C11Q6IEV9 310 aa2.68□□□□□ -1.98
CSDE1-208ENST00000524652 ANKRD26P1Q6NSI1 321 aa2.68□□□□□ -1.98
CSDE1-208ENST00000524652 EPGNQ6UW88 154 aa2.68□□□□□ -1.98
CSDE1-208ENST00000524652 GFRALQ6UXV0 394 aa2.68□□□□□ -1.98
CSDE1-208ENST00000524652 LANCL3Q6ZV70 420 aa2.68□□□□□ -1.98
CSDE1-208ENST00000524652 COMMD6Q7Z4G1 85 aa2.68□□□□□ -1.98
CSDE1-208ENST00000524652 MYPOPQ86VE0 399 aaPredicted RBP2.68□□□□□ -1.98
CSDE1-208ENST00000524652 TMEM219Q86XT9 240 aa2.68□□□□□ -1.98
CSDE1-208ENST00000524652 ODF3L1Q8IXM7 274 aa2.68□□□□□ -1.98
CSDE1-208ENST00000524652 PRSS58Q8IYP2 241 aa2.68□□□□□ -1.98
CSDE1-208ENST00000524652 CLYBLQ8N0X4 340 aa2.68□□□□□ -1.98
CSDE1-208ENST00000524652 CNPY4Q8N129 248 aa2.68□□□□□ -1.98
CSDE1-208ENST00000524652 KRTCAP2Q8N6L1 136 aa2.68□□□□□ -1.98
CSDE1-208ENST00000524652 C1orf52Q8N6N3 182 aaKnown RBP2.68□□□□□ -1.98
CSDE1-208ENST00000524652 ACOT4Q8N9L9 421 aa2.68□□□□□ -1.98
CSDE1-208ENST00000524652 TTC29Q8NA56 475 aaPredicted RBP2.68□□□□□ -1.98
CSDE1-208ENST00000524652 CAMKVQ8NCB2 501 aa2.68□□□□□ -1.98
CSDE1-208ENST00000524652 ZNF485Q8NCK3 441 aa2.68□□□□□ -1.98
CSDE1-208ENST00000524652 TRPV3Q8NET8 790 aa2.68□□□□□ -1.98
CSDE1-208ENST00000524652 SLC24A4Q8NFF2 622 aa2.68□□□□□ -1.98
CSDE1-208ENST00000524652 TTLQ8NG68 377 aa2.68□□□□□ -1.98
CSDE1-208ENST00000524652 OR51Q1Q8NH59 317 aa2.68□□□□□ -1.98
CSDE1-208ENST00000524652 CLHC1Q8NHS4 586 aa2.68□□□□□ -1.98
CSDE1-208ENST00000524652 RAB3IL1Q8TBN0 382 aa2.68□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 121.5 ms