RNA–Protein interactions for RNA: ENST00000524028.1

PTP4A3-206, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

TSL 5 BASIC

Gene PTP4A3, Length 963 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-206ENST00000524028 V9GYY5 206 aaPredicted RBP16.58■□□□□ 0.24
PTP4A3-206ENST00000524028 HMGN4O00479 90 aa16.57■□□□□ 0.24
PTP4A3-206ENST00000524028 GGT1P19440 569 aa16.57■□□□□ 0.24
PTP4A3-206ENST00000524028 PTNP21246 168 aa16.57■□□□□ 0.24
PTP4A3-206ENST00000524028 BGNP21810 368 aa16.57■□□□□ 0.24
PTP4A3-206ENST00000524028 IDUAP35475 653 aa16.57■□□□□ 0.24
PTP4A3-206ENST00000524028 KCNJ10P78508 379 aa16.57■□□□□ 0.24
PTP4A3-206ENST00000524028 FBXW9Q5XUX1 488 aa16.57■□□□□ 0.24
PTP4A3-206ENST00000524028 GRINAQ7Z429 371 aa16.57■□□□□ 0.24
PTP4A3-206ENST00000524028 MREGQ8N565 214 aa16.57■□□□□ 0.24
PTP4A3-206ENST00000524028 VPS37AQ8NEZ2 397 aa16.57■□□□□ 0.24
PTP4A3-206ENST00000524028 CNOT9Q92600 299 aaKnown RBP16.57■□□□□ 0.24
PTP4A3-206ENST00000524028 ZBTB9Q96C00 473 aa16.57■□□□□ 0.24
PTP4A3-206ENST00000524028 MUCL1Q96DR8 90 aa16.57■□□□□ 0.24
PTP4A3-206ENST00000524028 SLC35A5Q9BS91 424 aa16.57■□□□□ 0.24
PTP4A3-206ENST00000524028 REG4Q9BYZ8 158 aa16.57■□□□□ 0.24
PTP4A3-206ENST00000524028 SSU72Q9NP77 194 aaKnown RBP16.57■□□□□ 0.24
PTP4A3-206ENST00000524028 PNPOQ9NVS9 261 aa16.57■□□□□ 0.24
PTP4A3-206ENST00000524028 MARCOQ9UEW3 520 aaPredicted RBP16.57■□□□□ 0.24
PTP4A3-206ENST00000524028 GDF2Q9UK05 429 aaPredicted RBP16.57■□□□□ 0.24
PTP4A3-206ENST00000524028 CADP27708 2225 aa16.56■□□□□ 0.24
PTP4A3-206ENST00000524028 GOLGA8QA0A0J9YX86 632 aa16.56■□□□□ 0.24
PTP4A3-206ENST00000524028 GOLGA8OA6NCC3 632 aa16.56■□□□□ 0.24
PTP4A3-206ENST00000524028 OR5H1A6NKK0 313 aa16.56■□□□□ 0.24
PTP4A3-206ENST00000524028 GOLGA8NF8WBI6 632 aa16.56■□□□□ 0.24
PTP4A3-206ENST00000524028 AP3D1O14617 1153 aa16.56■□□□□ 0.24
PTP4A3-206ENST00000524028 ABCD4O14678 606 aa16.56■□□□□ 0.24
PTP4A3-206ENST00000524028 RGS16O15492 202 aaPredicted RBP16.56■□□□□ 0.24
PTP4A3-206ENST00000524028 RAD51DO75771 328 aa16.56■□□□□ 0.24
PTP4A3-206ENST00000524028 PMS2P2O95744 297 aa16.56■□□□□ 0.24
PTP4A3-206ENST00000524028 LBPP18428 481 aa16.56■□□□□ 0.24
PTP4A3-206ENST00000524028 CCNA2P20248 432 aa16.56■□□□□ 0.24
PTP4A3-206ENST00000524028 IDH2P48735 452 aaKnown RBP16.56■□□□□ 0.24
PTP4A3-206ENST00000524028 KHKP50053 298 aa16.56■□□□□ 0.24
PTP4A3-206ENST00000524028 FOXG1P55316 489 aaPredicted RBP16.56■□□□□ 0.24
PTP4A3-206ENST00000524028 NME5P56597 212 aa16.56■□□□□ 0.24
PTP4A3-206ENST00000524028 ETFDHQ16134 617 aa16.56■□□□□ 0.24
PTP4A3-206ENST00000524028 SYPL1Q16563 259 aa16.56■□□□□ 0.24
PTP4A3-206ENST00000524028 FAM174BQ3ZCQ3 159 aa16.56■□□□□ 0.24
PTP4A3-206ENST00000524028 GPAT3Q53EU6 434 aa16.56■□□□□ 0.24
PTP4A3-206ENST00000524028 DNM1P46Q6ZS02 220 aa16.56■□□□□ 0.24
PTP4A3-206ENST00000524028 P2RY8Q86VZ1 359 aa16.56■□□□□ 0.24
PTP4A3-206ENST00000524028 CCDC103Q8IW40 242 aa16.56■□□□□ 0.24
PTP4A3-206ENST00000524028 ARFGAP2Q8N6H7 521 aa16.56■□□□□ 0.24
PTP4A3-206ENST00000524028 ANKFN1Q8N957 763 aa16.56■□□□□ 0.24
PTP4A3-206ENST00000524028 CCDC115Q96NT0 180 aa16.56■□□□□ 0.24
PTP4A3-206ENST00000524028 EXOSC3Q9NQT5 275 aaKnown RBP16.56■□□□□ 0.24
PTP4A3-206ENST00000524028 ST6GALNAC1Q9NSC7 600 aaPredicted RBP16.56■□□□□ 0.24
PTP4A3-206ENST00000524028 EMC3Q9P0I2 261 aa16.56■□□□□ 0.24
PTP4A3-206ENST00000524028 NOSIPQ9Y314 301 aaKnown RBP16.56■□□□□ 0.24
PTP4A3-206ENST00000524028 SPIN1Q9Y657 262 aaPredicted RBP16.56■□□□□ 0.24
PTP4A3-206ENST00000524028 TM9SF1O15321 606 aa16.55■□□□□ 0.24
PTP4A3-206ENST00000524028 CRLF1O75462 422 aa16.55■□□□□ 0.24
PTP4A3-206ENST00000524028 ALDOCP09972 364 aaKnown RBP16.55■□□□□ 0.24
PTP4A3-206ENST00000524028 IL12AP29459 219 aa16.55■□□□□ 0.24
PTP4A3-206ENST00000524028 S100A3P33764 101 aa16.55■□□□□ 0.24
PTP4A3-206ENST00000524028 CHI3L1P36222 383 aaPredicted RBP16.55■□□□□ 0.24
PTP4A3-206ENST00000524028 CLNS1AP54105 237 aaKnown RBP16.55■□□□□ 0.24
PTP4A3-206ENST00000524028 UFM1P61960 85 aa16.55■□□□□ 0.24
PTP4A3-206ENST00000524028 DTX2Q86UW9 622 aa16.55■□□□□ 0.24
PTP4A3-206ENST00000524028 RNF130Q86XS8 419 aa16.55■□□□□ 0.24
PTP4A3-206ENST00000524028 LRRC34Q8IZ02 419 aa16.55■□□□□ 0.24
PTP4A3-206ENST00000524028 UBE2J2Q8N2K1 259 aa16.55■□□□□ 0.24
PTP4A3-206ENST00000524028 APH1AQ96BI3 265 aa16.55■□□□□ 0.24
PTP4A3-206ENST00000524028 INPP5KQ9BT40 448 aa16.55■□□□□ 0.24
PTP4A3-206ENST00000524028 SLC38A1Q9H2H9 487 aa16.55■□□□□ 0.24
PTP4A3-206ENST00000524028 MEAF6Q9HAF1 191 aa16.55■□□□□ 0.24
PTP4A3-206ENST00000524028 BTNL2Q9UIR0 455 aa16.55■□□□□ 0.24
PTP4A3-206ENST00000524028 HDGFL3Q9Y3E1 203 aa16.55■□□□□ 0.24
PTP4A3-206ENST00000524028 A0A1W2PR80 420 aa16.54■□□□□ 0.24
PTP4A3-206ENST00000524028 E9PBE3 544 aa16.54■□□□□ 0.24
PTP4A3-206ENST00000524028 SNUPNO95149 360 aaKnown RBP16.54■□□□□ 0.24
PTP4A3-206ENST00000524028 CHRM4P08173 479 aa16.54■□□□□ 0.24
PTP4A3-206ENST00000524028 CDKN2CP42773 168 aa16.54■□□□□ 0.24
PTP4A3-206ENST00000524028 SLC16A1P53985 500 aa16.54■□□□□ 0.24
PTP4A3-206ENST00000524028 CDH11P55287 796 aa16.54■□□□□ 0.24
PTP4A3-206ENST00000524028 H3F3AP84243 136 aa16.54■□□□□ 0.24
PTP4A3-206ENST00000524028 SPOCK1Q08629 439 aa16.54■□□□□ 0.24
PTP4A3-206ENST00000524028 STX3Q13277 289 aa16.54■□□□□ 0.24
PTP4A3-206ENST00000524028 DPY19L1Q2PZI1 675 aa16.54■□□□□ 0.24
PTP4A3-206ENST00000524028 TNFAIP8L3Q5GJ75 292 aa16.54■□□□□ 0.24
PTP4A3-206ENST00000524028 OR52N5Q8NH56 324 aa16.54■□□□□ 0.24
PTP4A3-206ENST00000524028 GRIP2Q9C0E4 1043 aa16.54■□□□□ 0.24
PTP4A3-206ENST00000524028 B3GALT5Q9Y2C3 310 aa16.54■□□□□ 0.24
PTP4A3-206ENST00000524028 SLC25A15Q9Y619 301 aa16.54■□□□□ 0.24
PTP4A3-206ENST00000524028 ANK3Q12955 4377 aaKnown RBP16.54■□□□□ 0.24
PTP4A3-206ENST00000524028 TMED7-TICAM2A0A0A6YYA0 188 aa16.53■□□□□ 0.24
PTP4A3-206ENST00000524028 TMEM72A0PK05 275 aa16.53■□□□□ 0.24
PTP4A3-206ENST00000524028 CCDC154A6NI56 674 aa16.53■□□□□ 0.24
PTP4A3-206ENST00000524028 AGAP5A6NIR3 686 aa16.53■□□□□ 0.24
PTP4A3-206ENST00000524028 CCT8L1PA6NM43 557 aa16.53■□□□□ 0.24
PTP4A3-206ENST00000524028 E7EQL1 145 aa16.53■□□□□ 0.24
PTP4A3-206ENST00000524028 DNPH1O43598 174 aa16.53■□□□□ 0.24
PTP4A3-206ENST00000524028 IMPDH2P12268 514 aa16.53■□□□□ 0.24
PTP4A3-206ENST00000524028 CLK1P49759 484 aaKnown RBP16.53■□□□□ 0.24
PTP4A3-206ENST00000524028 ZNF83P51522 516 aa16.53■□□□□ 0.24
PTP4A3-206ENST00000524028 OR2B6P58173 313 aa16.53■□□□□ 0.24
PTP4A3-206ENST00000524028 DMTNQ08495 405 aa16.53■□□□□ 0.24
PTP4A3-206ENST00000524028 BST1Q10588 318 aa16.53■□□□□ 0.24
PTP4A3-206ENST00000524028 COX20Q5RI15 118 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms