RNA–Protein interactions for RNA: ENST00000523504.5

TNFRSF10B-207, Transcript of TNF receptor superfamily member 10b, humanhuman

TSL 2

Gene TNFRSF10B, Length 1,464 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF10B-207ENST00000523504 SFTPDP35247 375 aa19.49■□□□□ 0.71
TNFRSF10B-207ENST00000523504 APOBEC1P41238 236 aaKnown RBP19.49■□□□□ 0.71
TNFRSF10B-207ENST00000523504 ELOA3BQ3SY89 546 aa19.49■□□□□ 0.71
TNFRSF10B-207ENST00000523504 HMBOX1Q6NT76 420 aa19.49■□□□□ 0.71
TNFRSF10B-207ENST00000523504 LINC00114Q6XXX2 140 aa19.49■□□□□ 0.71
TNFRSF10B-207ENST00000523504 ELOA3Q8NG57 546 aa19.49■□□□□ 0.71
TNFRSF10B-207ENST00000523504 LRTOMTQ8WZ04 291 aa19.49■□□□□ 0.71
TNFRSF10B-207ENST00000523504 POLR2J2Q9GZM3 115 aaKnown RBP19.49■□□□□ 0.71
TNFRSF10B-207ENST00000523504 POLR2J3Q9H1A7 115 aaKnown RBP19.49■□□□□ 0.71
TNFRSF10B-207ENST00000523504 PLSCR2Q9NRY7 297 aa19.49■□□□□ 0.71
TNFRSF10B-207ENST00000523504 CHRNA9Q9UGM1 479 aa19.49■□□□□ 0.71
TNFRSF10B-207ENST00000523504 U3KQV3 271 aa19.49■□□□□ 0.71
TNFRSF10B-207ENST00000523504 A0A087WUJ7 227 aa19.48■□□□□ 0.71
TNFRSF10B-207ENST00000523504 KPNA4O00629 521 aaPredicted RBP19.48■□□□□ 0.71
TNFRSF10B-207ENST00000523504 PIP5K1CO60331 668 aa19.48■□□□□ 0.71
TNFRSF10B-207ENST00000523504 H1F0P07305 194 aaKnown RBP19.48■□□□□ 0.71
TNFRSF10B-207ENST00000523504 CXCR1P25024 350 aa19.48■□□□□ 0.71
TNFRSF10B-207ENST00000523504 HTR3AP46098 478 aa19.48■□□□□ 0.71
TNFRSF10B-207ENST00000523504 LHX2P50458 406 aa19.48■□□□□ 0.71
TNFRSF10B-207ENST00000523504 UGT2B15P54855 530 aa19.48■□□□□ 0.71
TNFRSF10B-207ENST00000523504 CLDN20P56880 219 aa19.48■□□□□ 0.71
TNFRSF10B-207ENST00000523504 EGR4Q05215 589 aa19.48■□□□□ 0.71
TNFRSF10B-207ENST00000523504 ST3GAL3Q11203 375 aa19.48■□□□□ 0.71
TNFRSF10B-207ENST00000523504 LAPTM4AQ15012 233 aa19.48■□□□□ 0.71
TNFRSF10B-207ENST00000523504 FGD3Q5JSP0 725 aa19.48■□□□□ 0.71
TNFRSF10B-207ENST00000523504 C1QL3Q5VWW1 255 aa19.48■□□□□ 0.71
TNFRSF10B-207ENST00000523504 OR2T5Q6IEZ7 315 aa19.48■□□□□ 0.71
TNFRSF10B-207ENST00000523504 TBPL2Q6SJ96 375 aa19.48■□□□□ 0.71
TNFRSF10B-207ENST00000523504 CHERPQ8IWX8 916 aaKnown RBP19.48■□□□□ 0.71
TNFRSF10B-207ENST00000523504 LILRA2Q8N149 483 aa19.48■□□□□ 0.71
TNFRSF10B-207ENST00000523504 OR2T29Q8NH02 315 aa19.48■□□□□ 0.71
TNFRSF10B-207ENST00000523504 DTNBP1Q96EV8 351 aa19.48■□□□□ 0.71
TNFRSF10B-207ENST00000523504 ZNF347Q96SE7 839 aa19.48■□□□□ 0.71
TNFRSF10B-207ENST00000523504 BARD1Q99728 777 aaKnown RBP19.48■□□□□ 0.71
TNFRSF10B-207ENST00000523504 SLX1AQ9BQ83 275 aa19.48■□□□□ 0.71
TNFRSF10B-207ENST00000523504 SELENONQ9NZV5 590 aa19.48■□□□□ 0.71
TNFRSF10B-207ENST00000523504 SEC14L5O43304 696 aa19.48■□□□□ 0.71
TNFRSF10B-207ENST00000523504 KALRNO60229 2985 aa19.48■□□□□ 0.71
TNFRSF10B-207ENST00000523504 GADD45GO95257 159 aa19.48■□□□□ 0.71
TNFRSF10B-207ENST00000523504 POU3F2P20265 443 aaPredicted RBP19.48■□□□□ 0.71
TNFRSF10B-207ENST00000523504 SUCLG1P53597 346 aaKnown RBP19.48■□□□□ 0.71
TNFRSF10B-207ENST00000523504 CLDN15P56746 228 aa19.48■□□□□ 0.71
TNFRSF10B-207ENST00000523504 CRYZQ08257 329 aaKnown RBP19.48■□□□□ 0.71
TNFRSF10B-207ENST00000523504 SELENBP1Q13228 472 aa19.48■□□□□ 0.71
TNFRSF10B-207ENST00000523504 TRAM2Q15035 370 aa19.48■□□□□ 0.71
TNFRSF10B-207ENST00000523504 SEC23BQ15437 767 aa19.48■□□□□ 0.71
TNFRSF10B-207ENST00000523504 C3orf33Q6P1S2 294 aa19.48■□□□□ 0.71
TNFRSF10B-207ENST00000523504 TMEM179BQ7Z7N9 219 aa19.48■□□□□ 0.71
TNFRSF10B-207ENST00000523504 AMIGO2Q86SJ2 522 aa19.48■□□□□ 0.71
TNFRSF10B-207ENST00000523504 GGNQ86UU5 652 aa19.48■□□□□ 0.71
TNFRSF10B-207ENST00000523504 MEX3DQ86XN8 651 aaKnown RBP19.48■□□□□ 0.71
TNFRSF10B-207ENST00000523504 UBQLNLQ8IYU4 475 aa19.48■□□□□ 0.71
TNFRSF10B-207ENST00000523504 PFN4Q8NHR9 129 aa19.48■□□□□ 0.71
TNFRSF10B-207ENST00000523504 SLC7A13Q8TCU3 470 aa19.48■□□□□ 0.71
TNFRSF10B-207ENST00000523504 ABTB1Q969K4 478 aaPredicted RBP19.48■□□□□ 0.71
TNFRSF10B-207ENST00000523504 ARL5BQ96KC2 179 aa19.48■□□□□ 0.71
TNFRSF10B-207ENST00000523504 PKP2Q99959 881 aa19.48■□□□□ 0.71
TNFRSF10B-207ENST00000523504 FUZQ9BT04 418 aa19.48■□□□□ 0.71
TNFRSF10B-207ENST00000523504 LYVE1Q9Y5Y7 322 aa19.48■□□□□ 0.71
TNFRSF10B-207ENST00000523504 SVILO95425 2214 aa19.47■□□□□ 0.71
TNFRSF10B-207ENST00000523504 A0A1B0GVC2 190 aa19.47■□□□□ 0.71
TNFRSF10B-207ENST00000523504 A0A1W2PNR3 127 aa19.47■□□□□ 0.71
TNFRSF10B-207ENST00000523504 H0Y3Z8 333 aa19.47■□□□□ 0.71
TNFRSF10B-207ENST00000523504 HCN1O60741 890 aa19.47■□□□□ 0.71
TNFRSF10B-207ENST00000523504 PNMTP11086 282 aa19.47■□□□□ 0.71
TNFRSF10B-207ENST00000523504 CHMP24386 653 aa19.47■□□□□ 0.71
TNFRSF10B-207ENST00000523504 ELK4P28324 431 aa19.47■□□□□ 0.71
TNFRSF10B-207ENST00000523504 EXOC3L2Q2M3D2 409 aa19.47■□□□□ 0.71
TNFRSF10B-207ENST00000523504 SWT1Q5T5J6 900 aaKnown RBP19.47■□□□□ 0.71
TNFRSF10B-207ENST00000523504 VASNQ6EMK4 673 aa19.47■□□□□ 0.71
TNFRSF10B-207ENST00000523504 AAGABQ6PD74 315 aa19.47■□□□□ 0.71
TNFRSF10B-207ENST00000523504 PODNL1Q6PEZ8 512 aa19.47■□□□□ 0.71
TNFRSF10B-207ENST00000523504 OR4C15Q8NGM1 316 aa19.47■□□□□ 0.71
TNFRSF10B-207ENST00000523504 CPT1CQ8TCG5 803 aa19.47■□□□□ 0.71
TNFRSF10B-207ENST00000523504 STMN2Q93045 179 aa19.47■□□□□ 0.71
TNFRSF10B-207ENST00000523504 ZNF426Q9BUY5 554 aa19.47■□□□□ 0.71
TNFRSF10B-207ENST00000523504 SEMA6AQ9H2E6 1030 aa19.47■□□□□ 0.71
TNFRSF10B-207ENST00000523504 C12orf10Q9HB07 376 aa19.47■□□□□ 0.71
TNFRSF10B-207ENST00000523504 NTN4Q9HB63 628 aa19.47■□□□□ 0.71
TNFRSF10B-207ENST00000523504 RRP15Q9Y3B9 282 aaKnown RBP19.47■□□□□ 0.71
TNFRSF10B-207ENST00000523504 A0A1W2PRQ8 180 aa19.46■□□□□ 0.71
TNFRSF10B-207ENST00000523504 THRBP10828 461 aa19.46■□□□□ 0.71
TNFRSF10B-207ENST00000523504 LIMS1P48059 325 aa19.46■□□□□ 0.71
TNFRSF10B-207ENST00000523504 CLDN18P56856 261 aa19.46■□□□□ 0.71
TNFRSF10B-207ENST00000523504 SRYQ05066 204 aa19.46■□□□□ 0.71
TNFRSF10B-207ENST00000523504 DGCR6Q14129 220 aa19.46■□□□□ 0.71
TNFRSF10B-207ENST00000523504 CTU2Q2VPK5 515 aaKnown RBP19.46■□□□□ 0.71
TNFRSF10B-207ENST00000523504 TMEM176BQ3YBM2 270 aaPredicted RBP19.46■□□□□ 0.71
TNFRSF10B-207ENST00000523504 SYT14P1Q58G82 188 aa19.46■□□□□ 0.71
TNFRSF10B-207ENST00000523504 NHSL2Q5HYW2 709 aa19.46■□□□□ 0.71
TNFRSF10B-207ENST00000523504 ZFP1Q6P2D0 407 aa19.46■□□□□ 0.71
TNFRSF10B-207ENST00000523504 LSM14AQ8ND56 463 aaKnown RBP19.46■□□□□ 0.71
TNFRSF10B-207ENST00000523504 KTI12Q96EK9 354 aaPredicted RBP19.46■□□□□ 0.71
TNFRSF10B-207ENST00000523504 TIMP4Q99727 224 aa19.46■□□□□ 0.71
TNFRSF10B-207ENST00000523504 YY1AP1Q9H869 796 aa19.46■□□□□ 0.71
TNFRSF10B-207ENST00000523504 MEPEQ9NQ76 525 aaPredicted RBP19.46■□□□□ 0.71
TNFRSF10B-207ENST00000523504 AGPAT4Q9NRZ5 378 aa19.46■□□□□ 0.71
TNFRSF10B-207ENST00000523504 C20orf141Q9NUB4 165 aa19.46■□□□□ 0.71
TNFRSF10B-207ENST00000523504 A0A087WUU8 490 aa19.45■□□□□ 0.7
TNFRSF10B-207ENST00000523504 LRRN3E7EW58 273 aa19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms