RNA–Protein interactions for RNA: ENST00000522987.1

MRPS28-209, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 3

Gene MRPS28, Length 487 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-209ENST00000522987 CNOT9Q92600 299 aaKnown RBP13.58□□□□□ -0.24
MRPS28-209ENST00000522987 ROPN1LQ96C74 230 aa13.58□□□□□ -0.24
MRPS28-209ENST00000522987 RHNO1Q9BSD3 238 aa13.58□□□□□ -0.24
MRPS28-209ENST00000522987 CCDC106Q9BWC9 280 aa13.58□□□□□ -0.24
MRPS28-209ENST00000522987 DPY30Q9C005 99 aa13.58□□□□□ -0.24
MRPS28-209ENST00000522987 MANSC1Q9H8J5 431 aa13.58□□□□□ -0.24
MRPS28-209ENST00000522987 FAIMQ9NVQ4 179 aa13.58□□□□□ -0.24
MRPS28-209ENST00000522987 EMC3Q9P0I2 261 aa13.58□□□□□ -0.24
MRPS28-209ENST00000522987 CHRNA9Q9UGM1 479 aa13.58□□□□□ -0.24
MRPS28-209ENST00000522987 LGALS13Q9UHV8 139 aa13.58□□□□□ -0.24
MRPS28-209ENST00000522987 DUXAA6NLW8 204 aa13.57□□□□□ -0.24
MRPS28-209ENST00000522987 LY6HO94772 140 aa13.57□□□□□ -0.24
MRPS28-209ENST00000522987 PGM3O95394 542 aa13.57□□□□□ -0.24
MRPS28-209ENST00000522987 AK1P00568 194 aa13.57□□□□□ -0.24
MRPS28-209ENST00000522987 THBS1P07996 1170 aa13.57□□□□□ -0.24
MRPS28-209ENST00000522987 CHI3L1P36222 383 aaPredicted RBP13.57□□□□□ -0.24
MRPS28-209ENST00000522987 IDH2P48735 452 aaKnown RBP13.57□□□□□ -0.24
MRPS28-209ENST00000522987 FABP6P51161 128 aa13.57□□□□□ -0.24
MRPS28-209ENST00000522987 VSNL1P62760 191 aa13.57□□□□□ -0.24
MRPS28-209ENST00000522987 CHI3L2Q15782 390 aa13.57□□□□□ -0.24
MRPS28-209ENST00000522987 ATAD3BQ5T9A4 648 aa13.57□□□□□ -0.24
MRPS28-209ENST00000522987 AGAP6Q5VW22 663 aa13.57□□□□□ -0.24
MRPS28-209ENST00000522987 FRRS1Q6ZNA5 592 aa13.57□□□□□ -0.24
MRPS28-209ENST00000522987 DNM1P46Q6ZS02 220 aa13.57□□□□□ -0.24
MRPS28-209ENST00000522987 ADGRG3Q86Y34 549 aa13.57□□□□□ -0.24
MRPS28-209ENST00000522987 PHC2Q8IXK0 858 aa13.57□□□□□ -0.24
MRPS28-209ENST00000522987 RIBC1Q8N443 379 aaPredicted RBP13.57□□□□□ -0.24
MRPS28-209ENST00000522987 ZNF525Q8N782 197 aa13.57□□□□□ -0.24
MRPS28-209ENST00000522987 SPATA3Q8NHX4 192 aa13.57□□□□□ -0.24
MRPS28-209ENST00000522987 ZHX1-C8orf76Q96EF9 292 aa13.57□□□□□ -0.24
MRPS28-209ENST00000522987 BARX1Q9HBU1 254 aaPredicted RBP13.57□□□□□ -0.24
MRPS28-209ENST00000522987 SLC25A15Q9Y619 301 aa13.57□□□□□ -0.24
MRPS28-209ENST00000522987 ATP23Q9Y6H3 246 aa13.57□□□□□ -0.24
MRPS28-209ENST00000522987 MXRA5Q9NR99 2828 aa13.57□□□□□ -0.24
MRPS28-209ENST00000522987 PRAMEF27A3QJZ7 478 aa13.56□□□□□ -0.24
MRPS28-209ENST00000522987 A8MV72 311 aaPredicted RBP13.56□□□□□ -0.24
MRPS28-209ENST00000522987 RNASET2O00584 256 aaKnown RBP13.56□□□□□ -0.24
MRPS28-209ENST00000522987 DNAJA2O60884 412 aa13.56□□□□□ -0.24
MRPS28-209ENST00000522987 MRPL33O75394 65 aaKnown RBP13.56□□□□□ -0.24
MRPS28-209ENST00000522987 ITGA5P08648 1049 aa13.56□□□□□ -0.24
MRPS28-209ENST00000522987 CDH2P19022 906 aaPredicted RBP13.56□□□□□ -0.24
MRPS28-209ENST00000522987 UQCRC2P22695 453 aa13.56□□□□□ -0.24
MRPS28-209ENST00000522987 CD40P25942 277 aa13.56□□□□□ -0.24
MRPS28-209ENST00000522987 TTKP33981 857 aa13.56□□□□□ -0.24
MRPS28-209ENST00000522987 SERPINB5P36952 375 aa13.56□□□□□ -0.24
MRPS28-209ENST00000522987 KHKP50053 298 aa13.56□□□□□ -0.24
MRPS28-209ENST00000522987 MAD2L1Q13257 205 aaPredicted RBP13.56□□□□□ -0.24
MRPS28-209ENST00000522987 GABRA6Q16445 453 aa13.56□□□□□ -0.24
MRPS28-209ENST00000522987 SPANXN4Q5MJ08 99 aa13.56□□□□□ -0.24
MRPS28-209ENST00000522987 C11orf71Q6IPW1 123 aa13.56□□□□□ -0.24
MRPS28-209ENST00000522987 EMBQ6PCB8 327 aa13.56□□□□□ -0.24
MRPS28-209ENST00000522987 TMEM108Q6UXF1 575 aa13.56□□□□□ -0.24
MRPS28-209ENST00000522987 FBXL14Q8N1E6 418 aa13.56□□□□□ -0.24
MRPS28-209ENST00000522987 ARFGAP2Q8N6H7 521 aa13.56□□□□□ -0.24
MRPS28-209ENST00000522987 ANKFN1Q8N957 763 aa13.56□□□□□ -0.24
MRPS28-209ENST00000522987 FAM71CQ8NEG0 241 aa13.56□□□□□ -0.24
MRPS28-209ENST00000522987 SLC25A43Q8WUT9 341 aaPredicted RBP13.56□□□□□ -0.24
MRPS28-209ENST00000522987 RADILQ96JH8 1075 aa13.56□□□□□ -0.24
MRPS28-209ENST00000522987 ADAD1Q96M93 576 aaKnown RBP13.56□□□□□ -0.24
MRPS28-209ENST00000522987 USB1Q9BQ65 265 aaKnown RBP13.56□□□□□ -0.24
MRPS28-209ENST00000522987 SLC35A5Q9BS91 424 aa13.56□□□□□ -0.24
MRPS28-209ENST00000522987 C20orf27Q9GZN8 174 aa13.56□□□□□ -0.24
MRPS28-209ENST00000522987 ASB6Q9NWX5 421 aa13.56□□□□□ -0.24
MRPS28-209ENST00000522987 MARCOQ9UEW3 520 aaPredicted RBP13.56□□□□□ -0.24
MRPS28-209ENST00000522987 SPIN1Q9Y657 262 aaPredicted RBP13.56□□□□□ -0.24
MRPS28-209ENST00000522987 IGKV3D-15A0A087WSY6 115 aa13.55□□□□□ -0.24
MRPS28-209ENST00000522987 TMED7-TICAM2A0A0A6YYA0 188 aa13.55□□□□□ -0.24
MRPS28-209ENST00000522987 TMEM72A0PK05 275 aa13.55□□□□□ -0.24
MRPS28-209ENST00000522987 ZC3H12DA2A288 527 aaKnown RBP13.55□□□□□ -0.24
MRPS28-209ENST00000522987 TLX2O43763 284 aaPredicted RBP13.55□□□□□ -0.24
MRPS28-209ENST00000522987 TYROBPO43914 113 aa13.55□□□□□ -0.24
MRPS28-209ENST00000522987 SCN2BO60939 215 aa13.55□□□□□ -0.24
MRPS28-209ENST00000522987 NUDT17P0C025 328 aa13.55□□□□□ -0.24
MRPS28-209ENST00000522987 DHRS4L1P0CG22 281 aa13.55□□□□□ -0.24
MRPS28-209ENST00000522987 APOBEC1P41238 236 aaKnown RBP13.55□□□□□ -0.24
MRPS28-209ENST00000522987 ETV4P43268 484 aa13.55□□□□□ -0.24
MRPS28-209ENST00000522987 HPCAP84074 193 aa13.55□□□□□ -0.24
MRPS28-209ENST00000522987 SLC25A3Q00325 362 aa13.55□□□□□ -0.24
MRPS28-209ENST00000522987 SYPL1Q16563 259 aa13.55□□□□□ -0.24
MRPS28-209ENST00000522987 SAXO2Q658L1 398 aa13.55□□□□□ -0.24
MRPS28-209ENST00000522987 KLHL17Q6TDP4 642 aa13.55□□□□□ -0.24
MRPS28-209ENST00000522987 CLEC2AQ6UVW9 174 aa13.55□□□□□ -0.24
MRPS28-209ENST00000522987 DNAJC14Q6Y2X3 702 aaPredicted RBP13.55□□□□□ -0.24
MRPS28-209ENST00000522987 GRINAQ7Z429 371 aa13.55□□□□□ -0.24
MRPS28-209ENST00000522987 HIPK1Q86Z02 1210 aa13.55□□□□□ -0.24
MRPS28-209ENST00000522987 MUC15Q8N387 334 aa13.55□□□□□ -0.24
MRPS28-209ENST00000522987 PIGXQ8TBF5 258 aa13.55□□□□□ -0.24
MRPS28-209ENST00000522987 PNPT1Q8TCS8 783 aaKnown RBP13.55□□□□□ -0.24
MRPS28-209ENST00000522987 DHRS9Q9BPW9 319 aa13.55□□□□□ -0.24
MRPS28-209ENST00000522987 NUF2Q9BZD4 464 aa13.55□□□□□ -0.24
MRPS28-209ENST00000522987 SLC7A10Q9NS82 523 aa13.55□□□□□ -0.24
MRPS28-209ENST00000522987 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.55□□□□□ -0.24
MRPS28-209ENST00000522987 CBLN4Q9NTU7 201 aa13.55□□□□□ -0.24
MRPS28-209ENST00000522987 TAS2R16Q9NYV7 291 aa13.55□□□□□ -0.24
MRPS28-209ENST00000522987 UPB1Q9UBR1 384 aa13.55□□□□□ -0.24
MRPS28-209ENST00000522987 SLC35A3Q9Y2D2 325 aa13.55□□□□□ -0.24
MRPS28-209ENST00000522987 TMED7Q9Y3B3 224 aa13.55□□□□□ -0.24
MRPS28-209ENST00000522987 CUBNO60494 3623 aa13.55□□□□□ -0.24
MRPS28-209ENST00000522987 A0A096LNT2 108 aa13.54□□□□□ -0.24
MRPS28-209ENST00000522987 PMS2P2O95744 297 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms