RNA–Protein interactions for RNA: ENST00000522963.5

PVT1-215, Transcript of Pvt1 oncogene, humanhuman

TSL 4

Gene PVT1, Length 568 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-215ENST00000522963 GRINAQ7Z429 371 aa10.77□□□□□ -0.69
PVT1-215ENST00000522963 ATG4DQ86TL0 474 aaPredicted RBP10.77□□□□□ -0.69
PVT1-215ENST00000522963 C10orf67Q8IYJ2 551 aa10.77□□□□□ -0.69
PVT1-215ENST00000522963 OFCC1Q8IZS5 231 aa10.77□□□□□ -0.69
PVT1-215ENST00000522963 GTPBP8Q8N3Z3 284 aaPredicted RBP10.77□□□□□ -0.69
PVT1-215ENST00000522963 PIK3C3Q8NEB9 887 aa10.77□□□□□ -0.69
PVT1-215ENST00000522963 OR14L1PQ8NHC6 308 aa10.77□□□□□ -0.69
PVT1-215ENST00000522963 DNAJA4Q8WW22 397 aaPredicted RBP10.77□□□□□ -0.69
PVT1-215ENST00000522963 DTNBP1Q96EV8 351 aa10.77□□□□□ -0.69
PVT1-215ENST00000522963 MRGPRX4Q96LA9 322 aa10.77□□□□□ -0.69
PVT1-215ENST00000522963 DHRS1Q96LJ7 313 aa10.77□□□□□ -0.69
PVT1-215ENST00000522963 ZNF347Q96SE7 839 aa10.77□□□□□ -0.69
PVT1-215ENST00000522963 FNDC11Q9BVV2 318 aa10.77□□□□□ -0.69
PVT1-215ENST00000522963 SLC6A15Q9H2J7 730 aa10.77□□□□□ -0.69
PVT1-215ENST00000522963 YY1AP1Q9H869 796 aa10.77□□□□□ -0.69
PVT1-215ENST00000522963 NMNAT1Q9HAN9 279 aaPredicted RBP10.77□□□□□ -0.69
PVT1-215ENST00000522963 ACKR4Q9NPB9 350 aa10.77□□□□□ -0.69
PVT1-215ENST00000522963 MAN2C1Q9NTJ4 1040 aa10.77□□□□□ -0.69
PVT1-215ENST00000522963 VNN3Q9NY84 501 aa10.77□□□□□ -0.69
PVT1-215ENST00000522963 TNFRSF10DQ9UBN6 386 aa10.77□□□□□ -0.69
PVT1-215ENST00000522963 OSGIN1Q9UJX0 560 aa10.77□□□□□ -0.69
PVT1-215ENST00000522963 SLC7A7Q9UM01 511 aa10.77□□□□□ -0.69
PVT1-215ENST00000522963 RRP15Q9Y3B9 282 aaKnown RBP10.77□□□□□ -0.69
PVT1-215ENST00000522963 TESMINQ9Y4I5 508 aa10.77□□□□□ -0.69
PVT1-215ENST00000522963 PCNX3Q9H6A9 2034 aa10.76□□□□□ -0.69
PVT1-215ENST00000522963 TMED7-TICAM2A0A0A6YYA0 188 aa10.76□□□□□ -0.69
PVT1-215ENST00000522963 A0A1B0GUH1 482 aa10.76□□□□□ -0.69
PVT1-215ENST00000522963 OR2M5A3KFT3 312 aa10.76□□□□□ -0.69
PVT1-215ENST00000522963 PRRG2O14669 202 aa10.76□□□□□ -0.69
PVT1-215ENST00000522963 CHP2O43745 196 aa10.76□□□□□ -0.69
PVT1-215ENST00000522963 CST1P01037 141 aa10.76□□□□□ -0.69
PVT1-215ENST00000522963 H1F0P07305 194 aaKnown RBP10.76□□□□□ -0.69
PVT1-215ENST00000522963 STSP08842 583 aa10.76□□□□□ -0.69
PVT1-215ENST00000522963 ZNF17P17021 662 aa10.76□□□□□ -0.69
PVT1-215ENST00000522963 CCNA2P20248 432 aa10.76□□□□□ -0.69
PVT1-215ENST00000522963 IL11P20809 199 aa10.76□□□□□ -0.69
PVT1-215ENST00000522963 ADH6P28332 368 aa10.76□□□□□ -0.69
PVT1-215ENST00000522963 RRM2P31350 389 aa10.76□□□□□ -0.69
PVT1-215ENST00000522963 APOBEC1P41238 236 aaKnown RBP10.76□□□□□ -0.69
PVT1-215ENST00000522963 EIF1P41567 113 aaKnown RBP10.76□□□□□ -0.69
PVT1-215ENST00000522963 HTR3AP46098 478 aa10.76□□□□□ -0.69
PVT1-215ENST00000522963 POLR2HP52434 150 aaKnown RBP10.76□□□□□ -0.69
PVT1-215ENST00000522963 SPIBQ01892 262 aa10.76□□□□□ -0.69
PVT1-215ENST00000522963 ST3GAL3Q11203 375 aa10.76□□□□□ -0.69
PVT1-215ENST00000522963 OR2T5Q6IEZ7 315 aa10.76□□□□□ -0.69
PVT1-215ENST00000522963 ARHGAP11AQ6P4F7 1023 aa10.76□□□□□ -0.69
PVT1-215ENST00000522963 AAGABQ6PD74 315 aa10.76□□□□□ -0.69
PVT1-215ENST00000522963 WDR88Q6ZMY6 472 aa10.76□□□□□ -0.69
PVT1-215ENST00000522963 FGD2Q7Z6J4 655 aa10.76□□□□□ -0.69
PVT1-215ENST00000522963 CD163Q86VB7 1156 aa10.76□□□□□ -0.69
PVT1-215ENST00000522963 ADGRG3Q86Y34 549 aa10.76□□□□□ -0.69
PVT1-215ENST00000522963 NKAIN4Q8IVV8 208 aa10.76□□□□□ -0.69
PVT1-215ENST00000522963 OR5M9Q8NGP3 310 aa10.76□□□□□ -0.69
PVT1-215ENST00000522963 OR2T29Q8NH02 315 aa10.76□□□□□ -0.69
PVT1-215ENST00000522963 RNF217Q8TC41 542 aa10.76□□□□□ -0.69
PVT1-215ENST00000522963 SSC4DQ8WTU2 575 aa10.76□□□□□ -0.69
PVT1-215ENST00000522963 LRTOMTQ8WZ04 291 aa10.76□□□□□ -0.69
PVT1-215ENST00000522963 STMN2Q93045 179 aa10.76□□□□□ -0.69
PVT1-215ENST00000522963 SLC38A4Q969I6 547 aa10.76□□□□□ -0.69
PVT1-215ENST00000522963 SFXN2Q96NB2 322 aa10.76□□□□□ -0.69
PVT1-215ENST00000522963 PRSS27Q9BQR3 290 aa10.76□□□□□ -0.69
PVT1-215ENST00000522963 PIGQQ9BRB3 760 aa10.76□□□□□ -0.69
PVT1-215ENST00000522963 C12orf10Q9HB07 376 aa10.76□□□□□ -0.69
PVT1-215ENST00000522963 ALKBH4Q9NXW9 302 aa10.76□□□□□ -0.69
PVT1-215ENST00000522963 SELENONQ9NZV5 590 aa10.76□□□□□ -0.69
PVT1-215ENST00000522963 SLC6A5Q9Y345 797 aa10.76□□□□□ -0.69
PVT1-215ENST00000522963 TMED7Q9Y3B3 224 aa10.76□□□□□ -0.69
PVT1-215ENST00000522963 ICE1Q9Y2F5 2266 aa10.75□□□□□ -0.69
PVT1-215ENST00000522963 SPTBN1Q01082 2364 aaKnown RBP10.75□□□□□ -0.69
PVT1-215ENST00000522963 TENM4Q6N022 2769 aa10.75□□□□□ -0.69
PVT1-215ENST00000522963 A0A087WUJ7 227 aa10.75□□□□□ -0.69
PVT1-215ENST00000522963 TRGV5A0A0B4J1U4 118 aa10.75□□□□□ -0.69
PVT1-215ENST00000522963 A0A1W2PRQ8 180 aa10.75□□□□□ -0.69
PVT1-215ENST00000522963 TMEM72A0PK05 275 aa10.75□□□□□ -0.69
PVT1-215ENST00000522963 H0YHG0 523 aa10.75□□□□□ -0.69
PVT1-215ENST00000522963 CLOCKO15516 846 aa10.75□□□□□ -0.69
PVT1-215ENST00000522963 HNRNPRO43390 633 aaKnown RBP10.75□□□□□ -0.69
PVT1-215ENST00000522963 SUSD5O60279 629 aa10.75□□□□□ -0.69
PVT1-215ENST00000522963 IGHG3P01860 377 aa10.75□□□□□ -0.69
PVT1-215ENST00000522963 RNF224P0DH78 156 aa10.75□□□□□ -0.69
PVT1-215ENST00000522963 THRBP10828 461 aa10.75□□□□□ -0.69
PVT1-215ENST00000522963 PTNP21246 168 aa10.75□□□□□ -0.69
PVT1-215ENST00000522963 CXCR1P25024 350 aa10.75□□□□□ -0.69
PVT1-215ENST00000522963 IFNA8P32881 189 aa10.75□□□□□ -0.69
PVT1-215ENST00000522963 CA7P43166 264 aa10.75□□□□□ -0.69
PVT1-215ENST00000522963 GFRA1P56159 465 aa10.75□□□□□ -0.69
PVT1-215ENST00000522963 PER3P56645 1201 aa10.75□□□□□ -0.69
PVT1-215ENST00000522963 PPP1R8Q12972 351 aaKnown RBP10.75□□□□□ -0.69
PVT1-215ENST00000522963 DGCR6Q14129 220 aa10.75□□□□□ -0.69
PVT1-215ENST00000522963 TRAM2Q15035 370 aa10.75□□□□□ -0.69
PVT1-215ENST00000522963 ATP6AP1Q15904 470 aa10.75□□□□□ -0.69
PVT1-215ENST00000522963 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.75□□□□□ -0.691e-5■□□□□ 9.3
PVT1-215ENST00000522963 SWT1Q5T5J6 900 aaKnown RBP10.75□□□□□ -0.69
PVT1-215ENST00000522963 HMBOX1Q6NT76 420 aa10.75□□□□□ -0.69
PVT1-215ENST00000522963 LINC00114Q6XXX2 140 aa10.75□□□□□ -0.69
PVT1-215ENST00000522963 TRILQ7L0X0 811 aa10.75□□□□□ -0.69
PVT1-215ENST00000522963 AMIGO2Q86SJ2 522 aa10.75□□□□□ -0.69
PVT1-215ENST00000522963 LILRA2Q8N149 483 aa10.75□□□□□ -0.69
PVT1-215ENST00000522963 PKP2Q99959 881 aa10.75□□□□□ -0.69
PVT1-215ENST00000522963 DNAJB9Q9UBS3 223 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms