RNA–Protein interactions for RNA: ENST00000522900.5

SPIDR-220, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 3

Gene SPIDR, Length 692 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-220ENST00000522900 CCDC103Q8IW40 242 aa16.57■□□□□ 0.24
SPIDR-220ENST00000522900 LRRC8CQ8TDW0 803 aa16.57■□□□□ 0.24
SPIDR-220ENST00000522900 SLC38A5Q8WUX1 472 aa16.57■□□□□ 0.24
SPIDR-220ENST00000522900 PLPPR2Q96GM1 343 aa16.57■□□□□ 0.24
SPIDR-220ENST00000522900 TACO1Q9BSH4 297 aaKnown RBP16.57■□□□□ 0.24
SPIDR-220ENST00000522900 HDHD5Q9BXW7 423 aa16.57■□□□□ 0.24
SPIDR-220ENST00000522900 DLL4Q9NR61 685 aa16.57■□□□□ 0.24
SPIDR-220ENST00000522900 P2RX2Q9UBL9 471 aa16.57■□□□□ 0.24
SPIDR-220ENST00000522900 OSGIN1Q9UJX0 560 aa16.57■□□□□ 0.24
SPIDR-220ENST00000522900 TMED7Q9Y3B3 224 aa16.57■□□□□ 0.24
SPIDR-220ENST00000522900 PCDHB14Q9Y5E9 798 aa16.57■□□□□ 0.24
SPIDR-220ENST00000522900 DSPPQ9NZW4 1301 aa16.56■□□□□ 0.24
SPIDR-220ENST00000522900 TMEM72A0PK05 275 aa16.56■□□□□ 0.24
SPIDR-220ENST00000522900 ZNF724A8MTY0 619 aa16.56■□□□□ 0.24
SPIDR-220ENST00000522900 RAMP1O60894 148 aa16.56■□□□□ 0.24
SPIDR-220ENST00000522900 BCHEP06276 602 aa16.56■□□□□ 0.24
SPIDR-220ENST00000522900 NUDT7P0C024 238 aa16.56■□□□□ 0.24
SPIDR-220ENST00000522900 GKN3PP0CG01 181 aa16.56■□□□□ 0.24
SPIDR-220ENST00000522900 TACR3P29371 465 aa16.56■□□□□ 0.24
SPIDR-220ENST00000522900 NTF4P34130 210 aa16.56■□□□□ 0.24
SPIDR-220ENST00000522900 RIPPLY3P57055 190 aa16.56■□□□□ 0.24
SPIDR-220ENST00000522900 NKX6-1P78426 367 aaPredicted RBP16.56■□□□□ 0.24
SPIDR-220ENST00000522900 EPS8Q12929 822 aa16.56■□□□□ 0.24
SPIDR-220ENST00000522900 ABLIM2Q6H8Q1 611 aa16.56■□□□□ 0.24
SPIDR-220ENST00000522900 ZNF836Q6ZNA1 936 aa16.56■□□□□ 0.24
SPIDR-220ENST00000522900 PEX5LQ8IYB4 626 aa16.56■□□□□ 0.24
SPIDR-220ENST00000522900 CLIP4Q8N3C7 705 aa16.56■□□□□ 0.24
SPIDR-220ENST00000522900 OR52P1PQ8NH57 321 aa16.56■□□□□ 0.24
SPIDR-220ENST00000522900 PMM1Q92871 262 aa16.56■□□□□ 0.24
SPIDR-220ENST00000522900 TCF7L2Q9NQB0 619 aa16.56■□□□□ 0.24
SPIDR-220ENST00000522900 SPIN1Q9Y657 262 aaPredicted RBP16.56■□□□□ 0.24
SPIDR-220ENST00000522900 ZC3H12DA2A288 527 aaKnown RBP16.55■□□□□ 0.24
SPIDR-220ENST00000522900 CDHR4A6H8M9 788 aa16.55■□□□□ 0.24
SPIDR-220ENST00000522900 CFAP73A6NFT4 308 aa16.55■□□□□ 0.24
SPIDR-220ENST00000522900 ZNF716A6NP11 495 aa16.55■□□□□ 0.24
SPIDR-220ENST00000522900 TGDSO95455 350 aa16.55■□□□□ 0.24
SPIDR-220ENST00000522900 PMS2P2O95744 297 aa16.55■□□□□ 0.24
SPIDR-220ENST00000522900 IMPDH2P12268 514 aa16.55■□□□□ 0.24
SPIDR-220ENST00000522900 HOXB9P17482 250 aaPredicted RBP16.55■□□□□ 0.24
SPIDR-220ENST00000522900 IL32P24001 234 aa16.55■□□□□ 0.24
SPIDR-220ENST00000522900 ACAA2P42765 397 aaKnown RBP16.55■□□□□ 0.24
SPIDR-220ENST00000522900 SLC1A3P43003 542 aa16.55■□□□□ 0.24
SPIDR-220ENST00000522900 MAGEA8P43361 318 aa16.55■□□□□ 0.24
SPIDR-220ENST00000522900 MRPL19P49406 292 aaKnown RBP16.55■□□□□ 0.24
SPIDR-220ENST00000522900 POLR2HP52434 150 aaKnown RBP16.55■□□□□ 0.24
SPIDR-220ENST00000522900 OR2B6P58173 313 aa16.55■□□□□ 0.24
SPIDR-220ENST00000522900 GNA13Q14344 377 aa16.55■□□□□ 0.24
SPIDR-220ENST00000522900 P2RY6Q15077 328 aa16.55■□□□□ 0.24
SPIDR-220ENST00000522900 TAB1Q15750 504 aa16.55■□□□□ 0.24
SPIDR-220ENST00000522900 ZNF704Q6ZNC4 412 aaPredicted RBP16.55■□□□□ 0.24
SPIDR-220ENST00000522900 Q6ZT83 130 aa16.55■□□□□ 0.24
SPIDR-220ENST00000522900 GALNT5Q7Z7M9 940 aa16.55■□□□□ 0.24
SPIDR-220ENST00000522900 ATG4DQ86TL0 474 aaPredicted RBP16.55■□□□□ 0.24
SPIDR-220ENST00000522900 KISS1RQ969F8 398 aaPredicted RBP16.55■□□□□ 0.24
SPIDR-220ENST00000522900 TMEM19Q96HH6 336 aa16.55■□□□□ 0.24
SPIDR-220ENST00000522900 PIP5K1AQ99755 562 aa16.55■□□□□ 0.24
SPIDR-220ENST00000522900 ADAM19Q9H013 955 aa16.55■□□□□ 0.24
SPIDR-220ENST00000522900 GSX1Q9H4S2 264 aaPredicted RBP16.55■□□□□ 0.24
SPIDR-220ENST00000522900 SLC52A3Q9NQ40 469 aa16.55■□□□□ 0.24
SPIDR-220ENST00000522900 SLAMF8Q9P0V8 285 aa16.55■□□□□ 0.24
SPIDR-220ENST00000522900 HDGFL3Q9Y3E1 203 aa16.55■□□□□ 0.24
SPIDR-220ENST00000522900 CHST2Q9Y4C5 530 aa16.55■□□□□ 0.24
SPIDR-220ENST00000522900 IGKV3D-15A0A087WSY6 115 aa16.54■□□□□ 0.24
SPIDR-220ENST00000522900 CLIC1O00299 241 aa16.54■□□□□ 0.24
SPIDR-220ENST00000522900 FAAHO00519 579 aa16.54■□□□□ 0.24
SPIDR-220ENST00000522900 POLR3GO15318 223 aaPredicted RBP16.54■□□□□ 0.24
SPIDR-220ENST00000522900 SMPD2O60906 423 aa16.54■□□□□ 0.24
SPIDR-220ENST00000522900 LYZL6O75951 148 aa16.54■□□□□ 0.24
SPIDR-220ENST00000522900 PRG2P13727 222 aa16.54■□□□□ 0.24
SPIDR-220ENST00000522900 FPR1P21462 350 aa16.54■□□□□ 0.24
SPIDR-220ENST00000522900 HTR3AP46098 478 aa16.54■□□□□ 0.24
SPIDR-220ENST00000522900 CLK1P49759 484 aaKnown RBP16.54■□□□□ 0.24
SPIDR-220ENST00000522900 CRISP3P54108 245 aa16.54■□□□□ 0.24
SPIDR-220ENST00000522900 AQP5P55064 265 aa16.54■□□□□ 0.24
SPIDR-220ENST00000522900 ITGADQ13349 1161 aa16.54■□□□□ 0.24
SPIDR-220ENST00000522900 RGNQ15493 299 aa16.54■□□□□ 0.24
SPIDR-220ENST00000522900 BHLHA15Q7RTS1 189 aaPredicted RBP16.54■□□□□ 0.24
SPIDR-220ENST00000522900 MSRB3Q8IXL7 192 aa16.54■□□□□ 0.24
SPIDR-220ENST00000522900 ZNF100Q8IYN0 542 aa16.54■□□□□ 0.24
SPIDR-220ENST00000522900 MAL2Q969L2 176 aa16.54■□□□□ 0.24
SPIDR-220ENST00000522900 PIGTQ969N2 578 aa16.54■□□□□ 0.24
SPIDR-220ENST00000522900 CCL19Q99731 98 aa16.54■□□□□ 0.24
SPIDR-220ENST00000522900 TMEM204Q9BSN7 226 aa16.54■□□□□ 0.24
SPIDR-220ENST00000522900 SLC25A37Q9NYZ2 338 aa16.54■□□□□ 0.24
SPIDR-220ENST00000522900 TMEM181Q9P2C4 612 aa16.54■□□□□ 0.24
SPIDR-220ENST00000522900 ZNF443Q9Y2A4 671 aaPredicted RBP16.54■□□□□ 0.24
SPIDR-220ENST00000522900 NF1P21359 2839 aa16.53■□□□□ 0.24
SPIDR-220ENST00000522900 IGHV3-9P01782 118 aa16.53■□□□□ 0.24
SPIDR-220ENST00000522900 IGHV1-2P23083 117 aa16.53■□□□□ 0.24
SPIDR-220ENST00000522900 FKBP2P26885 142 aaKnown RBP16.53■□□□□ 0.24
SPIDR-220ENST00000522900 NR1H2P55055 460 aa16.53■□□□□ 0.24
SPIDR-220ENST00000522900 STX1BP61266 288 aa16.53■□□□□ 0.24
SPIDR-220ENST00000522900 H3F3AP84243 136 aa16.53■□□□□ 0.24
SPIDR-220ENST00000522900 PDK3Q15120 406 aa16.53■□□□□ 0.24
SPIDR-220ENST00000522900 LIN52Q52LA3 116 aa16.53■□□□□ 0.24
SPIDR-220ENST00000522900 PAGE3Q5JUK9 113 aa16.53■□□□□ 0.24
SPIDR-220ENST00000522900 BLOC1S3Q6QNY0 202 aa16.53■□□□□ 0.24
SPIDR-220ENST00000522900 SEZ6L2Q6UXD5 910 aa16.53■□□□□ 0.24
SPIDR-220ENST00000522900 LILRB1Q8NHL6 650 aaPredicted RBP16.53■□□□□ 0.24
SPIDR-220ENST00000522900 HSD17B8Q92506 261 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms