RNA–Protein interactions for RNA: ENST00000521944.1

TRAPPC9-212, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 492 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-212ENST00000521944 SELEP16581 610 aa7.58□□□□□ -1.2
TRAPPC9-212ENST00000521944 PRKCAP17252 672 aa7.58□□□□□ -1.2
TRAPPC9-212ENST00000521944 TCN1P20061 433 aaPredicted RBP7.58□□□□□ -1.2
TRAPPC9-212ENST00000521944 NPR2P20594 1047 aa7.58□□□□□ -1.2
TRAPPC9-212ENST00000521944 PCGF2P35227 344 aa7.58□□□□□ -1.2
TRAPPC9-212ENST00000521944 SLC1A3P43003 542 aa7.58□□□□□ -1.2
TRAPPC9-212ENST00000521944 TMEM33P57088 247 aa7.58□□□□□ -1.2
TRAPPC9-212ENST00000521944 LOXL3P58215 753 aa7.58□□□□□ -1.2
TRAPPC9-212ENST00000521944 RAE1P78406 368 aaKnown RBP7.58□□□□□ -1.2
TRAPPC9-212ENST00000521944 ZNF117Q03924 483 aa7.58□□□□□ -1.2
TRAPPC9-212ENST00000521944 IKZF1Q13422 519 aa7.58□□□□□ -1.2
TRAPPC9-212ENST00000521944 SLC29A2Q14542 456 aa7.58□□□□□ -1.2
TRAPPC9-212ENST00000521944 PDK3Q15120 406 aa7.58□□□□□ -1.2
TRAPPC9-212ENST00000521944 ZKSCAN8Q15776 578 aaPredicted RBP7.58□□□□□ -1.2
TRAPPC9-212ENST00000521944 SGO1Q5FBB7 561 aa7.58□□□□□ -1.2
TRAPPC9-212ENST00000521944 FRG2Q64ET8 278 aa7.58□□□□□ -1.2
TRAPPC9-212ENST00000521944 TMEM107Q6UX40 140 aa7.58□□□□□ -1.2
TRAPPC9-212ENST00000521944 C17orf107Q6ZR85 190 aa7.58□□□□□ -1.2
TRAPPC9-212ENST00000521944 SPATA21Q7Z572 469 aa7.58□□□□□ -1.2
TRAPPC9-212ENST00000521944 GOLGA7Q7Z5G4 137 aa7.58□□□□□ -1.2
TRAPPC9-212ENST00000521944 OR2L13Q8N349 312 aa7.58□□□□□ -1.2
TRAPPC9-212ENST00000521944 NUP37Q8NFH4 326 aa7.58□□□□□ -1.2
TRAPPC9-212ENST00000521944 B4GALNT2Q8NHY0 566 aa7.58□□□□□ -1.2
TRAPPC9-212ENST00000521944 STAG3L4Q8TBR4 150 aa7.58□□□□□ -1.2
TRAPPC9-212ENST00000521944 GPR119Q8TDV5 335 aa7.58□□□□□ -1.2
TRAPPC9-212ENST00000521944 CKAP2Q8WWK9 683 aa7.58□□□□□ -1.2
TRAPPC9-212ENST00000521944 UBE2FQ969M7 185 aa7.58□□□□□ -1.2
TRAPPC9-212ENST00000521944 SLC25A28Q96A46 364 aa7.58□□□□□ -1.2
TRAPPC9-212ENST00000521944 BOD1Q96IK1 185 aa7.58□□□□□ -1.2
TRAPPC9-212ENST00000521944 FRG2BQ96QU4 278 aa7.58□□□□□ -1.2
TRAPPC9-212ENST00000521944 DESI2Q9BSY9 194 aa7.58□□□□□ -1.2
TRAPPC9-212ENST00000521944 NAT9Q9BTE0 207 aa7.58□□□□□ -1.2
TRAPPC9-212ENST00000521944 ZNF442Q9H7R0 627 aa7.58□□□□□ -1.2
TRAPPC9-212ENST00000521944 ZNF665Q9H7R5 613 aa7.58□□□□□ -1.2
TRAPPC9-212ENST00000521944 PFDN4Q9NQP4 134 aa7.58□□□□□ -1.2
TRAPPC9-212ENST00000521944 SLC35C2Q9NQQ7 365 aa7.58□□□□□ -1.2
TRAPPC9-212ENST00000521944 AHSPQ9NZD4 102 aa7.58□□□□□ -1.2
TRAPPC9-212ENST00000521944 CRNNQ9UBG3 495 aaPredicted RBP7.58□□□□□ -1.2
TRAPPC9-212ENST00000521944 CHMP2BQ9UQN3 213 aa7.58□□□□□ -1.2
TRAPPC9-212ENST00000521944 NOSIPQ9Y314 301 aaKnown RBP7.58□□□□□ -1.2
TRAPPC9-212ENST00000521944 TEX264Q9Y6I9 313 aa7.58□□□□□ -1.2
TRAPPC9-212ENST00000521944 HYDINQ4G0P3 5121 aa7.58□□□□□ -1.2
TRAPPC9-212ENST00000521944 MYO1GB0I1T2 1018 aa7.57□□□□□ -1.2
TRAPPC9-212ENST00000521944 ETV2O00321 342 aaPredicted RBP7.57□□□□□ -1.2
TRAPPC9-212ENST00000521944 TIMM23O14925 209 aa7.57□□□□□ -1.2
TRAPPC9-212ENST00000521944 PPIHO43447 177 aaKnown RBP7.57□□□□□ -1.2
TRAPPC9-212ENST00000521944 S100BP04271 92 aaPredicted RBP7.57□□□□□ -1.2
TRAPPC9-212ENST00000521944 IL3P08700 152 aa7.57□□□□□ -1.2
TRAPPC9-212ENST00000521944 CELA3BP08861 270 aa7.57□□□□□ -1.2
TRAPPC9-212ENST00000521944 ACHEP22303 614 aa7.57□□□□□ -1.2
TRAPPC9-212ENST00000521944 ASMTP46597 345 aa7.57□□□□□ -1.2
TRAPPC9-212ENST00000521944 DIO1P49895 249 aa7.57□□□□□ -1.2
TRAPPC9-212ENST00000521944 SEC24CP53992 1094 aa7.57□□□□□ -1.2
TRAPPC9-212ENST00000521944 TRA2BP62995 288 aaKnown RBP7.57□□□□□ -1.2
TRAPPC9-212ENST00000521944 POU3F1Q03052 451 aaPredicted RBP7.57□□□□□ -1.2
TRAPPC9-212ENST00000521944 MGAT5Q09328 741 aa7.57□□□□□ -1.2
TRAPPC9-212ENST00000521944 GTF2H2Q13888 395 aa7.57□□□□□ -1.2
TRAPPC9-212ENST00000521944 FAM189A2Q15884 450 aa7.57□□□□□ -1.2
TRAPPC9-212ENST00000521944 SLC25A53Q5H9E4 307 aa7.57□□□□□ -1.2
TRAPPC9-212ENST00000521944 TSPO2Q5TGU0 170 aa7.57□□□□□ -1.2
TRAPPC9-212ENST00000521944 DCAF12L2Q5VW00 463 aa7.57□□□□□ -1.2
TRAPPC9-212ENST00000521944 OLFML2AQ68BL7 652 aa7.57□□□□□ -1.2
TRAPPC9-212ENST00000521944 GTF2H2CQ6P1K8 395 aa7.57□□□□□ -1.2
TRAPPC9-212ENST00000521944 C16orf87Q6PH81 154 aa7.57□□□□□ -1.2
TRAPPC9-212ENST00000521944 SPATC1Q76KD6 591 aa7.57□□□□□ -1.2
TRAPPC9-212ENST00000521944 MTDHQ86UE4 582 aaKnown RBP7.57□□□□□ -1.2
TRAPPC9-212ENST00000521944 CCDC103Q8IW40 242 aa7.57□□□□□ -1.2
TRAPPC9-212ENST00000521944 C1orf52Q8N6N3 182 aaKnown RBP7.57□□□□□ -1.2
TRAPPC9-212ENST00000521944 DEFB108BQ8NET1 73 aa7.57□□□□□ -1.2
TRAPPC9-212ENST00000521944 MRAPQ8TCY5 172 aa7.57□□□□□ -1.2
TRAPPC9-212ENST00000521944 JADE3Q92613 823 aa7.57□□□□□ -1.2
TRAPPC9-212ENST00000521944 RDH5Q92781 318 aa7.57□□□□□ -1.2
TRAPPC9-212ENST00000521944 FAIM2Q9BWQ8 316 aa7.57□□□□□ -1.2
TRAPPC9-212ENST00000521944 SLC12A4Q9UP95 1085 aa7.57□□□□□ -1.2
TRAPPC9-212ENST00000521944 CXorf49A8MYA2 514 aaPredicted RBP7.56□□□□□ -1.2
TRAPPC9-212ENST00000521944 KIF2AO00139 706 aaPredicted RBP7.56□□□□□ -1.2
TRAPPC9-212ENST00000521944 NR5A2O00482 541 aa7.56□□□□□ -1.2
TRAPPC9-212ENST00000521944 COQ9O75208 318 aa7.56□□□□□ -1.2
TRAPPC9-212ENST00000521944 MRPL33O75394 65 aaKnown RBP7.56□□□□□ -1.2
TRAPPC9-212ENST00000521944 CRYAAP02489 173 aa7.56□□□□□ -1.2
TRAPPC9-212ENST00000521944 JUNP05412 331 aaKnown RBP7.56□□□□□ -1.2
TRAPPC9-212ENST00000521944 ERCC1P07992 297 aaPredicted RBP7.56□□□□□ -1.2
TRAPPC9-212ENST00000521944 ANPEPP15144 967 aa7.56□□□□□ -1.2
TRAPPC9-212ENST00000521944 IVDP26440 423 aa7.56□□□□□ -1.2
TRAPPC9-212ENST00000521944 CXCR5P32302 372 aa7.56□□□□□ -1.2
TRAPPC9-212ENST00000521944 SLC16A1P53985 500 aa7.56□□□□□ -1.2
TRAPPC9-212ENST00000521944 PSMD4P55036 377 aaKnown RBP7.56□□□□□ -1.2
TRAPPC9-212ENST00000521944 TUBA1BP68363 451 aa7.56□□□□□ -1.2
TRAPPC9-212ENST00000521944 TUBA4AP68366 448 aa7.56□□□□□ -1.2
TRAPPC9-212ENST00000521944 TRAF3Q13114 568 aa7.56□□□□□ -1.2
TRAPPC9-212ENST00000521944 TAF9Q16594 264 aa7.56□□□□□ -1.2
TRAPPC9-212ENST00000521944 PFKFB4Q16877 469 aa7.56□□□□□ -1.2
TRAPPC9-212ENST00000521944 NDUFAF6Q330K2 333 aa7.56□□□□□ -1.2
TRAPPC9-212ENST00000521944 SLC9B1Q4ZJI4 515 aa7.56□□□□□ -1.2
TRAPPC9-212ENST00000521944 C1QTNF12Q5T7M4 302 aa7.56□□□□□ -1.2
TRAPPC9-212ENST00000521944 SAXO2Q658L1 398 aa7.56□□□□□ -1.2
TRAPPC9-212ENST00000521944 TMPPEQ6ZT21 453 aa7.56□□□□□ -1.2
TRAPPC9-212ENST00000521944 TUBA1AQ71U36 451 aa7.56□□□□□ -1.2
TRAPPC9-212ENST00000521944 CBLL1Q75N03 491 aa7.56□□□□□ -1.2
TRAPPC9-212ENST00000521944 JAZF1Q86VZ6 243 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms