RNA–Protein interactions for RNA: ENST00000517533.5

CTNNA1-202, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-202ENST00000517533 ATP13A3Q9H7F0 1226 aa4.79□□□□□ -1.64
CTNNA1-202ENST00000517533 PRSS16Q9NQE7 514 aa4.79□□□□□ -1.64
CTNNA1-202ENST00000517533 EURLQ9NYK6 297 aa4.79□□□□□ -1.64
CTNNA1-202ENST00000517533 TAS2R16Q9NYV7 291 aa4.79□□□□□ -1.64
CTNNA1-202ENST00000517533 ADA2Q9NZK5 511 aa4.79□□□□□ -1.64
CTNNA1-202ENST00000517533 TAAR2Q9P1P5 351 aa4.79□□□□□ -1.64
CTNNA1-202ENST00000517533 EIF3KQ9UBQ5 218 aaKnown RBP4.79□□□□□ -1.64
CTNNA1-202ENST00000517533 CLN8Q9UBY8 286 aa4.79□□□□□ -1.64
CTNNA1-202ENST00000517533 OARD1Q9Y530 152 aa4.79□□□□□ -1.64
CTNNA1-202ENST00000517533 GMPPBQ9Y5P6 360 aa4.79□□□□□ -1.64
CTNNA1-202ENST00000517533 SELENOKQ9Y6D0 94 aa4.79□□□□□ -1.64
CTNNA1-202ENST00000517533 NPIPA5A0A0B4J1W7 369 aa4.78□□□□□ -1.64
CTNNA1-202ENST00000517533 GSTTP1A0A1W2PQM5 241 aa4.78□□□□□ -1.64
CTNNA1-202ENST00000517533 RAB19A4D1S5 217 aa4.78□□□□□ -1.64
CTNNA1-202ENST00000517533 TMCO5BA8MYB1 307 aa4.78□□□□□ -1.64
CTNNA1-202ENST00000517533 NPIPA5E9PKD4 350 aa4.78□□□□□ -1.64
CTNNA1-202ENST00000517533 H3BMQ9 156 aa4.78□□□□□ -1.64
CTNNA1-202ENST00000517533 PSTPIP1O43586 416 aa4.78□□□□□ -1.64
CTNNA1-202ENST00000517533 PDE5AO76074 875 aa4.78□□□□□ -1.64
CTNNA1-202ENST00000517533 IGHG4P01861 327 aa4.78□□□□□ -1.64
CTNNA1-202ENST00000517533 RPLP0P05388 317 aaKnown RBP4.78□□□□□ -1.64
CTNNA1-202ENST00000517533 HOXB7P09629 217 aa4.78□□□□□ -1.64
CTNNA1-202ENST00000517533 IGHV4-38-2P0DP08 117 aa4.78□□□□□ -1.64
CTNNA1-202ENST00000517533 MYL2P10916 166 aa4.78□□□□□ -1.64
CTNNA1-202ENST00000517533 NEFHP12036 1026 aa4.78□□□□□ -1.64
CTNNA1-202ENST00000517533 PRDX3P30048 256 aaKnown RBP4.78□□□□□ -1.64
CTNNA1-202ENST00000517533 RRM2P31350 389 aa4.78□□□□□ -1.64
CTNNA1-202ENST00000517533 NAA10P41227 235 aaPredicted RBP4.78□□□□□ -1.64
CTNNA1-202ENST00000517533 RFX3P48380 749 aa4.78□□□□□ -1.64
CTNNA1-202ENST00000517533 HOXA1P49639 335 aaPredicted RBP4.78□□□□□ -1.64
CTNNA1-202ENST00000517533 DVL1P1P54792 670 aaPredicted RBP4.78□□□□□ -1.64
CTNNA1-202ENST00000517533 CLDN18P56856 261 aa4.78□□□□□ -1.64
CTNNA1-202ENST00000517533 RPS27AP62979 156 aaKnown RBP4.78□□□□□ -1.64
CTNNA1-202ENST00000517533 CDR2Q01850 454 aa4.78□□□□□ -1.64
CTNNA1-202ENST00000517533 LRRC63Q05C16 580 aa4.78□□□□□ -1.64
CTNNA1-202ENST00000517533 CCDC173Q0VFZ6 552 aa4.78□□□□□ -1.64
CTNNA1-202ENST00000517533 RAB40BQ12829 278 aa4.78□□□□□ -1.64
CTNNA1-202ENST00000517533 FHL1Q13642 323 aa4.78□□□□□ -1.64
CTNNA1-202ENST00000517533 TMEM187Q14656 261 aa4.78□□□□□ -1.64
CTNNA1-202ENST00000517533 LAGE3Q14657 143 aa4.78□□□□□ -1.64
CTNNA1-202ENST00000517533 HSDL1Q3SXM5 330 aa4.78□□□□□ -1.64
CTNNA1-202ENST00000517533 WDR25Q64LD2 544 aaPredicted RBP4.78□□□□□ -1.64
CTNNA1-202ENST00000517533 C22orf42Q6IC83 251 aa4.78□□□□□ -1.64
CTNNA1-202ENST00000517533 REEP3Q6NUK4 255 aa4.78□□□□□ -1.64
CTNNA1-202ENST00000517533 SLC16A14Q7RTX9 510 aa4.78□□□□□ -1.64
CTNNA1-202ENST00000517533 ZNF565Q8N9K5 539 aa4.78□□□□□ -1.64
CTNNA1-202ENST00000517533 GATSQ8NAP1 163 aa4.78□□□□□ -1.64
CTNNA1-202ENST00000517533 OR4D6Q8NGJ1 314 aa4.78□□□□□ -1.64
CTNNA1-202ENST00000517533 OR52H1Q8NGJ2 320 aa4.78□□□□□ -1.64
CTNNA1-202ENST00000517533 TBCKQ8TEA7 893 aa4.78□□□□□ -1.64
CTNNA1-202ENST00000517533 CA5BP1Q8WTZ4 195 aa4.78□□□□□ -1.64
CTNNA1-202ENST00000517533 PIH1D2Q8WWB5 315 aa4.78□□□□□ -1.64
CTNNA1-202ENST00000517533 NAT6Q93015 286 aa4.78□□□□□ -1.64
CTNNA1-202ENST00000517533 BIRC7Q96CA5 298 aa4.78□□□□□ -1.64
CTNNA1-202ENST00000517533 NSMCE3Q96MG7 304 aa4.78□□□□□ -1.64
CTNNA1-202ENST00000517533 KCNA7Q96RP8 456 aa4.78□□□□□ -1.64
CTNNA1-202ENST00000517533 UPF3BQ9BZI7 483 aaKnown RBP4.78□□□□□ -1.64
CTNNA1-202ENST00000517533 RANBP3Q9H6Z4 567 aaPredicted RBP4.78□□□□□ -1.64
CTNNA1-202ENST00000517533 ADGRL4Q9HBW9 690 aa4.78□□□□□ -1.64
CTNNA1-202ENST00000517533 NUP50Q9UKX7 468 aa4.78□□□□□ -1.64
CTNNA1-202ENST00000517533 EXOGQ9Y2C4 368 aaKnown RBP4.78□□□□□ -1.64
CTNNA1-202ENST00000517533 IGHV4-61A0A0C4DH41 118 aa4.77□□□□□ -1.65
CTNNA1-202ENST00000517533 FCN1O00602 326 aa4.77□□□□□ -1.65
CTNNA1-202ENST00000517533 RAB29O14966 203 aa4.77□□□□□ -1.65
CTNNA1-202ENST00000517533 HUS1O60921 280 aa4.77□□□□□ -1.65
CTNNA1-202ENST00000517533 C1orf105O95561 183 aa4.77□□□□□ -1.65
CTNNA1-202ENST00000517533 IGHV4-59P01825 116 aa4.77□□□□□ -1.65
CTNNA1-202ENST00000517533 SNHG28P0DPA3 235 aa4.77□□□□□ -1.65
CTNNA1-202ENST00000517533 BCKDHAP12694 445 aa4.77□□□□□ -1.65
CTNNA1-202ENST00000517533 IDSP22304 550 aa4.77□□□□□ -1.65
CTNNA1-202ENST00000517533 IL12BP29460 328 aa4.77□□□□□ -1.65
CTNNA1-202ENST00000517533 PKNOX1P55347 436 aa4.77□□□□□ -1.65
CTNNA1-202ENST00000517533 PEX3P56589 373 aa4.77□□□□□ -1.65
CTNNA1-202ENST00000517533 SKP1P63208 163 aa4.77□□□□□ -1.65
CTNNA1-202ENST00000517533 UBE2IP63279 158 aaKnown RBP4.77□□□□□ -1.65
CTNNA1-202ENST00000517533 LCN2P80188 198 aa4.77□□□□□ -1.65
CTNNA1-202ENST00000517533 ART3Q13508 389 aa4.77□□□□□ -1.65
CTNNA1-202ENST00000517533 NCF4Q15080 339 aa4.77□□□□□ -1.65
CTNNA1-202ENST00000517533 C18orf21Q32NC0 220 aaPredicted RBP4.77□□□□□ -1.65
CTNNA1-202ENST00000517533 C9orf135Q5VTT2 229 aa4.77□□□□□ -1.65
CTNNA1-202ENST00000517533 GPR107Q5VW38 600 aa4.77□□□□□ -1.65
CTNNA1-202ENST00000517533 ZNF470Q6ECI4 717 aa4.77□□□□□ -1.65
CTNNA1-202ENST00000517533 SPSB3Q6PJ21 355 aa4.77□□□□□ -1.65
CTNNA1-202ENST00000517533 STAC2Q6ZMT1 411 aa4.77□□□□□ -1.65
CTNNA1-202ENST00000517533 TRMT10CQ7L0Y3 403 aaKnown RBP4.77□□□□□ -1.65
CTNNA1-202ENST00000517533 PRSS48Q7RTY5 328 aa4.77□□□□□ -1.65
CTNNA1-202ENST00000517533 LRRC49Q8IUZ0 686 aa4.77□□□□□ -1.65
CTNNA1-202ENST00000517533 NELFCDQ8IXH7 590 aa4.77□□□□□ -1.65
CTNNA1-202ENST00000517533 ATP6V0D2Q8N8Y2 350 aa4.77□□□□□ -1.65
CTNNA1-202ENST00000517533 OR6F1Q8NGZ6 308 aa4.77□□□□□ -1.65
CTNNA1-202ENST00000517533 ZNF641Q96N77 438 aaPredicted RBP4.77□□□□□ -1.65
CTNNA1-202ENST00000517533 CLCC1Q96S66 551 aa4.77□□□□□ -1.65
CTNNA1-202ENST00000517533 NKX3-1Q99801 234 aaPredicted RBP4.77□□□□□ -1.65
CTNNA1-202ENST00000517533 SLC29A1Q99808 456 aa4.77□□□□□ -1.65
CTNNA1-202ENST00000517533 SYT11Q9BT88 431 aa4.77□□□□□ -1.65
CTNNA1-202ENST00000517533 NANSQ9NR45 359 aa4.77□□□□□ -1.65
CTNNA1-202ENST00000517533 CUTCQ9NTM9 273 aa4.77□□□□□ -1.65
CTNNA1-202ENST00000517533 BFARQ9NZS9 450 aa4.77□□□□□ -1.65
CTNNA1-202ENST00000517533 GREB1LQ9C091 1923 aaPredicted RBP4.76□□□□□ -1.65
CTNNA1-202ENST00000517533 FBP2O00757 339 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms