RNA–Protein interactions for RNA: ENST00000515572.5

SNF8-215, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 687 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-215ENST00000515572 HTR2AP28223 471 aa10.7□□□□□ -0.7
SNF8-215ENST00000515572 SFTPDP35247 375 aa10.7□□□□□ -0.7
SNF8-215ENST00000515572 TIMP3P35625 211 aa10.7□□□□□ -0.7
SNF8-215ENST00000515572 EIF1AXP47813 144 aaKnown RBP10.7□□□□□ -0.7
SNF8-215ENST00000515572 SMSP52788 366 aa10.7□□□□□ -0.7
SNF8-215ENST00000515572 CARD18P57730 90 aa10.7□□□□□ -0.7
SNF8-215ENST00000515572 CBX1P83916 185 aa10.7□□□□□ -0.7
SNF8-215ENST00000515572 HOXC5Q00444 222 aa10.7□□□□□ -0.7
SNF8-215ENST00000515572 TMEM176BQ3YBM2 270 aaPredicted RBP10.7□□□□□ -0.7
SNF8-215ENST00000515572 RIPPLY2Q5TAB7 128 aa10.7□□□□□ -0.7
SNF8-215ENST00000515572 ZNF613Q6PF04 617 aa10.7□□□□□ -0.7
SNF8-215ENST00000515572 ATG4DQ86TL0 474 aaPredicted RBP10.7□□□□□ -0.7
SNF8-215ENST00000515572 FAM156AQ8NDB6 213 aa10.7□□□□□ -0.7
SNF8-215ENST00000515572 OR10D3Q8NH80 312 aa10.7□□□□□ -0.7
SNF8-215ENST00000515572 OR2V1Q8NHB1 315 aa10.7□□□□□ -0.7
SNF8-215ENST00000515572 MBD3L2Q8NHZ7 208 aaPredicted RBP10.7□□□□□ -0.7
SNF8-215ENST00000515572 VANGL1Q8TAA9 524 aaPredicted RBP10.7□□□□□ -0.7
SNF8-215ENST00000515572 RND1Q92730 232 aa10.7□□□□□ -0.7
SNF8-215ENST00000515572 CPNE4Q96A23 557 aaPredicted RBP10.7□□□□□ -0.7
SNF8-215ENST00000515572 C3orf49Q96BT1 292 aa10.7□□□□□ -0.7
SNF8-215ENST00000515572 SLC7A6OSQ96CW6 309 aaPredicted RBP10.7□□□□□ -0.7
SNF8-215ENST00000515572 DDIT4LQ96D03 193 aa10.7□□□□□ -0.7
SNF8-215ENST00000515572 CCDC120Q96HB5 630 aa10.7□□□□□ -0.7
SNF8-215ENST00000515572 ZFP3Q96NJ6 502 aa10.7□□□□□ -0.7
SNF8-215ENST00000515572 MCHR1Q99705 422 aa10.7□□□□□ -0.7
SNF8-215ENST00000515572 TM9SF2Q99805 663 aa10.7□□□□□ -0.7
SNF8-215ENST00000515572 BTBD10Q9BSF8 475 aa10.7□□□□□ -0.7
SNF8-215ENST00000515572 POLR2J2Q9GZM3 115 aaKnown RBP10.7□□□□□ -0.7
SNF8-215ENST00000515572 PCDHAC1Q9H158 963 aa10.7□□□□□ -0.7
SNF8-215ENST00000515572 POLR2J3Q9H1A7 115 aaKnown RBP10.7□□□□□ -0.7
SNF8-215ENST00000515572 DCAF13Q9NV06 445 aaKnown RBP10.7□□□□□ -0.7
SNF8-215ENST00000515572 CLCF1Q9UBD9 225 aa10.7□□□□□ -0.7
SNF8-215ENST00000515572 MCTS1Q9ULC4 181 aaKnown RBP10.7□□□□□ -0.7
SNF8-215ENST00000515572 HDGFL3Q9Y3E1 203 aa10.7□□□□□ -0.7
SNF8-215ENST00000515572 ZNF175Q9Y473 711 aa10.7□□□□□ -0.7
SNF8-215ENST00000515572 DOCK7Q96N67 2140 aa10.69□□□□□ -0.7
SNF8-215ENST00000515572 MPDZO75970 2070 aa10.69□□□□□ -0.7
SNF8-215ENST00000515572 A0A0J9YW62 118 aa10.69□□□□□ -0.7
SNF8-215ENST00000515572 A0A1B0GWA3 101 aa10.69□□□□□ -0.7
SNF8-215ENST00000515572 WIPF3A6NGB9 483 aa10.69□□□□□ -0.7
SNF8-215ENST00000515572 SLC22A20A6NK97 555 aa10.69□□□□□ -0.7
SNF8-215ENST00000515572 ELOA3DA6NLF2 546 aaPredicted RBP10.69□□□□□ -0.7
SNF8-215ENST00000515572 A8MVM7 634 aa10.69□□□□□ -0.7
SNF8-215ENST00000515572 TMEM229AB2RXF0 380 aa10.69□□□□□ -0.7
SNF8-215ENST00000515572 H0YC42 278 aa10.69□□□□□ -0.7
SNF8-215ENST00000515572 ARPC2O15144 300 aa10.69□□□□□ -0.7
SNF8-215ENST00000515572 DNPH1O43598 174 aa10.69□□□□□ -0.7
SNF8-215ENST00000515572 SYNGR4O95473 234 aa10.69□□□□□ -0.7
SNF8-215ENST00000515572 IL2RAP01589 272 aa10.69□□□□□ -0.7
SNF8-215ENST00000515572 OPN1LWP04000 364 aa10.69□□□□□ -0.7
SNF8-215ENST00000515572 AGAP20933 346 aa10.69□□□□□ -0.7
SNF8-215ENST00000515572 SHC1P29353 583 aa10.69□□□□□ -0.7
SNF8-215ENST00000515572 TPD52P55327 224 aaPredicted RBP10.69□□□□□ -0.7
SNF8-215ENST00000515572 NUP107P57740 925 aa10.69□□□□□ -0.7
SNF8-215ENST00000515572 CSNK2A1P68400 391 aaPredicted RBP10.69□□□□□ -0.7
SNF8-215ENST00000515572 PMPCAQ10713 525 aa10.69□□□□□ -0.7
SNF8-215ENST00000515572 TRIM25Q14258 630 aaKnown RBP10.69□□□□□ -0.7
SNF8-215ENST00000515572 OR1Q1Q15612 314 aa10.69□□□□□ -0.7
SNF8-215ENST00000515572 ELOA3BQ3SY89 546 aa10.69□□□□□ -0.7
SNF8-215ENST00000515572 IFI44LQ53G44 452 aa10.69□□□□□ -0.7
SNF8-215ENST00000515572 ALG10BQ5I7T1 473 aa10.69□□□□□ -0.7
SNF8-215ENST00000515572 OR2A2Q6IF42 318 aa10.69□□□□□ -0.7
SNF8-215ENST00000515572 C5orf46Q6UWT4 87 aa10.69□□□□□ -0.7
SNF8-215ENST00000515572 FKBP9P1Q75LS8 142 aa10.69□□□□□ -0.7
SNF8-215ENST00000515572 CARM1Q86X55 608 aa10.69□□□□□ -0.7
SNF8-215ENST00000515572 RPRMLQ8N4K4 120 aa10.69□□□□□ -0.7
SNF8-215ENST00000515572 MARVELD2Q8N4S9 558 aa10.69□□□□□ -0.7
SNF8-215ENST00000515572 ELOA3Q8NG57 546 aa10.69□□□□□ -0.7
SNF8-215ENST00000515572 SSC4DQ8WTU2 575 aa10.69□□□□□ -0.7
SNF8-215ENST00000515572 GEMIN6Q8WXD5 167 aaKnown RBP10.69□□□□□ -0.7
SNF8-215ENST00000515572 OSTF1Q92882 214 aa10.69□□□□□ -0.7
SNF8-215ENST00000515572 POP5Q969H6 163 aaKnown RBP10.69□□□□□ -0.7
SNF8-215ENST00000515572 SLC47A1Q96FL8 570 aa10.69□□□□□ -0.7
SNF8-215ENST00000515572 NSMCE2Q96MF7 247 aa10.69□□□□□ -0.7
SNF8-215ENST00000515572 OR5B2Q96R09 309 aa10.69□□□□□ -0.7
SNF8-215ENST00000515572 THTPAQ9BU02 230 aa10.69□□□□□ -0.7
SNF8-215ENST00000515572 POTEKPQ9BYX7 375 aa10.69□□□□□ -0.7
SNF8-215ENST00000515572 COQ3Q9NZJ6 369 aa10.69□□□□□ -0.7
SNF8-215ENST00000515572 ACTR3BQ9P1U1 418 aa10.69□□□□□ -0.7
SNF8-215ENST00000515572 HELZ2Q9BYK8 2649 aaKnown RBP10.69□□□□□ -0.7
SNF8-215ENST00000515572 A0A0B4J2E0 115 aa10.68□□□□□ -0.7
SNF8-215ENST00000515572 A0A1B0GX12 115 aa10.68□□□□□ -0.7
SNF8-215ENST00000515572 TMEM72A0PK05 275 aa10.68□□□□□ -0.7
SNF8-215ENST00000515572 TRAPPC13A5PLN9 417 aa10.68□□□□□ -0.7
SNF8-215ENST00000515572 HSPB2A8KAH6 182 aa10.68□□□□□ -0.7
SNF8-215ENST00000515572 EBAG9O00559 213 aa10.68□□□□□ -0.7
SNF8-215ENST00000515572 CXCL13O43927 109 aa10.68□□□□□ -0.7
SNF8-215ENST00000515572 TPST2O60704 377 aa10.68□□□□□ -0.7
SNF8-215ENST00000515572 DNAJC8O75937 253 aaPredicted RBP10.68□□□□□ -0.7
SNF8-215ENST00000515572 STAMBPO95630 424 aa10.68□□□□□ -0.7
SNF8-215ENST00000515572 PMS2P2O95744 297 aa10.68□□□□□ -0.7
SNF8-215ENST00000515572 LDLRP01130 860 aa10.68□□□□□ -0.7
SNF8-215ENST00000515572 IFNW1P05000 195 aa10.68□□□□□ -0.7
SNF8-215ENST00000515572 THRBP10828 461 aa10.68□□□□□ -0.7
SNF8-215ENST00000515572 CCNA2P20248 432 aa10.68□□□□□ -0.7
SNF8-215ENST00000515572 CEACAM8P31997 349 aaPredicted RBP10.68□□□□□ -0.7
SNF8-215ENST00000515572 IFNA8P32881 189 aa10.68□□□□□ -0.7
SNF8-215ENST00000515572 RAC3P60763 192 aa10.68□□□□□ -0.7
SNF8-215ENST00000515572 ADORA2A-AS1P86434 159 aa10.68□□□□□ -0.7
SNF8-215ENST00000515572 SRSF1Q07955 248 aaKnown RBP eCLIP10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms