RNA–Protein interactions for RNA: ENST00000514484.6

LPCAT1-206, Transcript of lysophosphatidylcholine acyltransferase 1, humanhuman

TSL 3

Gene LPCAT1, Length 756 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT1-206ENST00000514484 ART1P52961 327 aa16.82■□□□□ 0.28
LPCAT1-206ENST00000514484 RASGEF1BQ0VAM2 473 aa16.82■□□□□ 0.28
LPCAT1-206ENST00000514484 SF3A3Q12874 501 aaKnown RBP eCLIP16.82■□□□□ 0.284e-10■■■■■ 52.9
LPCAT1-206ENST00000514484 FADDQ13158 208 aa16.82■□□□□ 0.28
LPCAT1-206ENST00000514484 TESK1Q15569 626 aa16.82■□□□□ 0.28
LPCAT1-206ENST00000514484 TSC22D1Q15714 1073 aa16.82■□□□□ 0.28
LPCAT1-206ENST00000514484 TMPPEQ6ZT21 453 aa16.82■□□□□ 0.28
LPCAT1-206ENST00000514484 STK32CQ86UX6 486 aa16.82■□□□□ 0.28
LPCAT1-206ENST00000514484 CLIP4Q8N3C7 705 aa16.82■□□□□ 0.28
LPCAT1-206ENST00000514484 RAD21L1Q9H4I0 556 aa16.82■□□□□ 0.28
LPCAT1-206ENST00000514484 ZNF385DQ9H6B1 395 aa16.82■□□□□ 0.28
LPCAT1-206ENST00000514484 A4GALTQ9NPC4 353 aa16.82■□□□□ 0.28
LPCAT1-206ENST00000514484 KLHL9Q9P2J3 617 aa16.82■□□□□ 0.28
LPCAT1-206ENST00000514484 NIPSNAP3AQ9UFN0 247 aaPredicted RBP16.82■□□□□ 0.28
LPCAT1-206ENST00000514484 OSGIN1Q9UJX0 560 aa16.82■□□□□ 0.28
LPCAT1-206ENST00000514484 TMED7Q9Y3B3 224 aa16.82■□□□□ 0.28
LPCAT1-206ENST00000514484 CHST2Q9Y4C5 530 aa16.82■□□□□ 0.28
LPCAT1-206ENST00000514484 HIVEP1P15822 2718 aa16.81■□□□□ 0.28
LPCAT1-206ENST00000514484 TRBV5-3A0A0A0MS03 114 aa16.81■□□□□ 0.28
LPCAT1-206ENST00000514484 CYTIPO60759 359 aa16.81■□□□□ 0.28
LPCAT1-206ENST00000514484 YES1P07947 543 aa16.81■□□□□ 0.28
LPCAT1-206ENST00000514484 PRG2P13727 222 aa16.81■□□□□ 0.28
LPCAT1-206ENST00000514484 EDNRAP25101 427 aa16.81■□□□□ 0.28
LPCAT1-206ENST00000514484 POLR2HP52434 150 aaKnown RBP16.81■□□□□ 0.28
LPCAT1-206ENST00000514484 LARS2Q15031 903 aaKnown RBP16.81■□□□□ 0.28
LPCAT1-206ENST00000514484 GCNT6Q5T4J0 391 aa16.81■□□□□ 0.28
LPCAT1-206ENST00000514484 RNF220Q5VTB9 566 aa16.81■□□□□ 0.28
LPCAT1-206ENST00000514484 PAMR1Q6UXH9 720 aa16.81■□□□□ 0.28
LPCAT1-206ENST00000514484 BEND4Q6ZU67 534 aa16.81■□□□□ 0.28
LPCAT1-206ENST00000514484 SLC43A2Q8N370 569 aa16.81■□□□□ 0.28
LPCAT1-206ENST00000514484 CADM2Q8N3J6 435 aa16.81■□□□□ 0.28
LPCAT1-206ENST00000514484 NFKBIDQ8NI38 313 aa16.81■□□□□ 0.28
LPCAT1-206ENST00000514484 PMM1Q92871 262 aa16.81■□□□□ 0.28
LPCAT1-206ENST00000514484 PIK3IP1Q96FE7 263 aa16.81■□□□□ 0.28
LPCAT1-206ENST00000514484 PLEKHF2Q9H8W4 249 aa16.81■□□□□ 0.28
LPCAT1-206ENST00000514484 THUMPD1Q9NXG2 353 aaKnown RBP16.81■□□□□ 0.28
LPCAT1-206ENST00000514484 ZNF226Q9NYT6 803 aa16.81■□□□□ 0.28
LPCAT1-206ENST00000514484 DSCAMO60469 2012 aa16.8■□□□□ 0.28
LPCAT1-206ENST00000514484 A0A0G2JPF8 293 aa16.8■□□□□ 0.28
LPCAT1-206ENST00000514484 ZC3H12DA2A288 527 aaKnown RBP16.8■□□□□ 0.28
LPCAT1-206ENST00000514484 HNRNPCL2B2RXH8 293 aa16.8■□□□□ 0.28
LPCAT1-206ENST00000514484 HNRNPCL3B7ZW38 293 aa16.8■□□□□ 0.28
LPCAT1-206ENST00000514484 FRS3O43559 492 aa16.8■□□□□ 0.28
LPCAT1-206ENST00000514484 HNRNPCL1O60812 293 aaKnown RBP16.8■□□□□ 0.28
LPCAT1-206ENST00000514484 THBDP07204 575 aa16.8■□□□□ 0.28
LPCAT1-206ENST00000514484 HNRNPCL4P0DMR1 293 aa16.8■□□□□ 0.28
LPCAT1-206ENST00000514484 ARAFP10398 606 aa16.8■□□□□ 0.28
LPCAT1-206ENST00000514484 BMP2P12643 396 aa16.8■□□□□ 0.28
LPCAT1-206ENST00000514484 UQCRBP14927 111 aa16.8■□□□□ 0.28
LPCAT1-206ENST00000514484 CRYGSP22914 178 aa16.8■□□□□ 0.28
LPCAT1-206ENST00000514484 ACAA2P42765 397 aaKnown RBP16.8■□□□□ 0.28
LPCAT1-206ENST00000514484 CSNK2A1P68400 391 aaPredicted RBP16.8■□□□□ 0.28
LPCAT1-206ENST00000514484 ABLIM2Q6H8Q1 611 aa16.8■□□□□ 0.28
LPCAT1-206ENST00000514484 SERPINA11Q86U17 422 aa16.8■□□□□ 0.28
LPCAT1-206ENST00000514484 CXorf67Q86X51 503 aaPredicted RBP16.8■□□□□ 0.28
LPCAT1-206ENST00000514484 ZNF440Q8IYI8 595 aa16.8■□□□□ 0.28
LPCAT1-206ENST00000514484 STON2Q8WXE9 905 aa16.8■□□□□ 0.28
LPCAT1-206ENST00000514484 ACTR6Q9GZN1 396 aa16.8■□□□□ 0.28
LPCAT1-206ENST00000514484 BCO1Q9HAY6 547 aa16.8■□□□□ 0.28
LPCAT1-206ENST00000514484 CACYBPQ9HB71 228 aaKnown RBP16.8■□□□□ 0.28
LPCAT1-206ENST00000514484 RAI1Q7Z5J4 1906 aaPredicted RBP16.8■□□□□ 0.28
LPCAT1-206ENST00000514484 ZNF469Q96JG9 3925 aaPredicted RBP16.79■□□□□ 0.28
LPCAT1-206ENST00000514484 A0A1W2PP18 115 aa16.79■□□□□ 0.28
LPCAT1-206ENST00000514484 ZNF814B7Z6K7 855 aa16.79■□□□□ 0.28
LPCAT1-206ENST00000514484 C5orf58C9J3I9 102 aa16.79■□□□□ 0.28
LPCAT1-206ENST00000514484 FAAHO00519 579 aa16.79■□□□□ 0.28
LPCAT1-206ENST00000514484 RAMP1O60894 148 aa16.79■□□□□ 0.28
LPCAT1-206ENST00000514484 GCM2O75603 506 aaPredicted RBP16.79■□□□□ 0.28
LPCAT1-206ENST00000514484 GOSR1O95249 250 aa16.79■□□□□ 0.28
LPCAT1-206ENST00000514484 PMS2P2O95744 297 aa16.79■□□□□ 0.28
LPCAT1-206ENST00000514484 THBS1P07996 1170 aa16.79■□□□□ 0.28
LPCAT1-206ENST00000514484 SLC1A3P43003 542 aa16.79■□□□□ 0.28
LPCAT1-206ENST00000514484 HTR3AP46098 478 aa16.79■□□□□ 0.28
LPCAT1-206ENST00000514484 OR2B6P58173 313 aa16.79■□□□□ 0.28
LPCAT1-206ENST00000514484 HOXC5Q00444 222 aa16.79■□□□□ 0.28
LPCAT1-206ENST00000514484 ZNF311Q5JNZ3 666 aa16.79■□□□□ 0.28
LPCAT1-206ENST00000514484 ALKBH2Q6NS38 261 aa16.79■□□□□ 0.28
LPCAT1-206ENST00000514484 BBS10Q8TAM1 723 aa16.79■□□□□ 0.28
LPCAT1-206ENST00000514484 NINJ1Q92982 152 aa16.79■□□□□ 0.28
LPCAT1-206ENST00000514484 HS3ST6Q96QI5 342 aa16.79■□□□□ 0.28
LPCAT1-206ENST00000514484 CPPED1Q9BRF8 314 aaPredicted RBP16.79■□□□□ 0.28
LPCAT1-206ENST00000514484 SPATA9Q9BWV2 254 aa16.79■□□□□ 0.28
LPCAT1-206ENST00000514484 TMEM120AQ9BXJ8 343 aa16.79■□□□□ 0.28
LPCAT1-206ENST00000514484 RABEP2Q9H5N1 569 aa16.79■□□□□ 0.28
LPCAT1-206ENST00000514484 GP6Q9HCN6 339 aa16.79■□□□□ 0.28
LPCAT1-206ENST00000514484 FGFR1OP2Q9NVK5 253 aa16.79■□□□□ 0.28
LPCAT1-206ENST00000514484 PRSS50Q9UI38 385 aa16.79■□□□□ 0.28
LPCAT1-206ENST00000514484 TRIM33Q9UPN9 1127 aa16.79■□□□□ 0.28
LPCAT1-206ENST00000514484 HDGFL3Q9Y3E1 203 aa16.79■□□□□ 0.28
LPCAT1-206ENST00000514484 PGM3O95394 542 aa16.78■□□□□ 0.28
LPCAT1-206ENST00000514484 IMPDH2P12268 514 aa16.78■□□□□ 0.28
LPCAT1-206ENST00000514484 DNASE1P24855 282 aa16.78■□□□□ 0.28
LPCAT1-206ENST00000514484 BNIP2Q12982 314 aa16.78■□□□□ 0.28
LPCAT1-206ENST00000514484 DLEU7Q6UYE1 221 aa16.78■□□□□ 0.28
LPCAT1-206ENST00000514484 DHDDSQ86SQ9 333 aa16.78■□□□□ 0.28
LPCAT1-206ENST00000514484 MTDHQ86UE4 582 aaKnown RBP16.78■□□□□ 0.28
LPCAT1-206ENST00000514484 RETREG3Q86VR2 466 aa16.78■□□□□ 0.28
LPCAT1-206ENST00000514484 COMTD1Q86VU5 262 aa16.78■□□□□ 0.28
LPCAT1-206ENST00000514484 WFDC8Q8IUA0 241 aa16.78■□□□□ 0.28
LPCAT1-206ENST00000514484 CCDC103Q8IW40 242 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms