RNA–Protein interactions for RNA: ENST00000514267.1

CALCOCO2-223, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 2

Gene CALCOCO2, Length 336 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-223ENST00000514267 TGIF2LXQ8IUE1 241 aa2.73□□□□□ -1.97
CALCOCO2-223ENST00000514267 SLC22A9Q8IVM8 553 aa2.73□□□□□ -1.97
CALCOCO2-223ENST00000514267 CLEC4FQ8N1N0 589 aa2.73□□□□□ -1.97
CALCOCO2-223ENST00000514267 UBE2J2Q8N2K1 259 aa2.73□□□□□ -1.97
CALCOCO2-223ENST00000514267 SUMF1Q8NBK3 374 aa2.73□□□□□ -1.97
CALCOCO2-223ENST00000514267 AKR7LQ8NHP1 331 aa2.73□□□□□ -1.97
CALCOCO2-223ENST00000514267 CNIH3Q8TBE1 160 aa2.73□□□□□ -1.97
CALCOCO2-223ENST00000514267 M1APQ8TC57 530 aa2.73□□□□□ -1.97
CALCOCO2-223ENST00000514267 MIPOL1Q8TD10 442 aa2.73□□□□□ -1.97
CALCOCO2-223ENST00000514267 BADQ92934 168 aa2.73□□□□□ -1.97
CALCOCO2-223ENST00000514267 ANKRD9Q96BM1 317 aaPredicted RBP2.73□□□□□ -1.97
CALCOCO2-223ENST00000514267 ZNF689Q96CS4 500 aaPredicted RBP2.73□□□□□ -1.97
CALCOCO2-223ENST00000514267 RASD2Q96D21 266 aa2.73□□□□□ -1.97
CALCOCO2-223ENST00000514267 TMEM80Q96HE8 168 aa2.73□□□□□ -1.97
CALCOCO2-223ENST00000514267 ZNF597Q96LX8 424 aa2.73□□□□□ -1.97
CALCOCO2-223ENST00000514267 AGAP3Q96P47 875 aa2.73□□□□□ -1.97
CALCOCO2-223ENST00000514267 RBM14Q96PK6 669 aaKnown RBP2.73□□□□□ -1.97
CALCOCO2-223ENST00000514267 CITED1Q99966 193 aa2.73□□□□□ -1.97
CALCOCO2-223ENST00000514267 NIPSNAP3BQ9BS92 247 aa2.73□□□□□ -1.97
CALCOCO2-223ENST00000514267 CCDC28BQ9BUN5 200 aa2.73□□□□□ -1.97
CALCOCO2-223ENST00000514267 HCAR1Q9BXC0 346 aa2.73□□□□□ -1.97
CALCOCO2-223ENST00000514267 GON7Q9BXV9 100 aa2.73□□□□□ -1.97
CALCOCO2-223ENST00000514267 OPN3Q9H1Y3 402 aaPredicted RBP2.73□□□□□ -1.97
CALCOCO2-223ENST00000514267 BOLA2Q9H3K6 86 aa2.73□□□□□ -1.97
CALCOCO2-223ENST00000514267 PPDPFQ9H3Y8 114 aa2.73□□□□□ -1.97
CALCOCO2-223ENST00000514267 MCCC2Q9HCC0 563 aa2.73□□□□□ -1.97
CALCOCO2-223ENST00000514267 MEPEQ9NQ76 525 aaPredicted RBP2.73□□□□□ -1.97
CALCOCO2-223ENST00000514267 IMPAD1Q9NX62 359 aa2.73□□□□□ -1.97
CALCOCO2-223ENST00000514267 WRAP73Q9P2S5 460 aaPredicted RBP2.73□□□□□ -1.97
CALCOCO2-223ENST00000514267 SEC14L3Q9UDX4 400 aa2.73□□□□□ -1.97
CALCOCO2-223ENST00000514267 LCMT1Q9UIC8 334 aa2.73□□□□□ -1.97
CALCOCO2-223ENST00000514267 MUTYHQ9UIF7 546 aa2.73□□□□□ -1.97
CALCOCO2-223ENST00000514267 SAMD4AQ9UPU9 718 aaKnown RBP2.73□□□□□ -1.97
CALCOCO2-223ENST00000514267 POLDIP2Q9Y2S7 368 aa2.73□□□□□ -1.97
CALCOCO2-223ENST00000514267 ATP6V1DQ9Y5K8 247 aa2.73□□□□□ -1.97
CALCOCO2-223ENST00000514267 ALG6Q9Y672 507 aa2.73□□□□□ -1.97
CALCOCO2-223ENST00000514267 OVOS2A0A0G2JMS6 1433 aa2.73□□□□□ -1.97
CALCOCO2-223ENST00000514267 NCOA3Q9Y6Q9 1424 aa2.73□□□□□ -1.97
CALCOCO2-223ENST00000514267 WDR81Q562E7 1941 aa2.73□□□□□ -1.97
CALCOCO2-223ENST00000514267 MARF1Q9Y4F3 1742 aaKnown RBP2.73□□□□□ -1.97
CALCOCO2-223ENST00000514267 ADCY9O60503 1353 aa2.73□□□□□ -1.97
CALCOCO2-223ENST00000514267 SLIT3O75094 1523 aa2.73□□□□□ -1.97
CALCOCO2-223ENST00000514267 ADAMTSL3P82987 1691 aa2.73□□□□□ -1.97
CALCOCO2-223ENST00000514267 USP54Q70EL1 1684 aa2.73□□□□□ -1.97
CALCOCO2-223ENST00000514267 LMO7Q8WWI1 1683 aa2.73□□□□□ -1.97
CALCOCO2-223ENST00000514267 CACNA1FO60840 1977 aa2.72□□□□□ -1.97
CALCOCO2-223ENST00000514267 PCDH11XQ9BZA7 1347 aa2.72□□□□□ -1.97
CALCOCO2-223ENST00000514267 PXDNQ92626 1479 aa2.72□□□□□ -1.97
CALCOCO2-223ENST00000514267 KDM3BQ7LBC6 1761 aa2.72□□□□□ -1.97
CALCOCO2-223ENST00000514267 IGHV2-70DA0A0C4DH43 119 aa2.72□□□□□ -1.97
CALCOCO2-223ENST00000514267 LRP5LA4QPB2 252 aa2.72□□□□□ -1.97
CALCOCO2-223ENST00000514267 RPL37AP8A6NKH3 93 aa2.72□□□□□ -1.97
CALCOCO2-223ENST00000514267 FAM220BPB1ANY3 271 aa2.72□□□□□ -1.97
CALCOCO2-223ENST00000514267 E9PBE3 544 aa2.72□□□□□ -1.97
CALCOCO2-223ENST00000514267 F5H6K3 240 aa2.72□□□□□ -1.97
CALCOCO2-223ENST00000514267 G3V4G9 280 aa2.72□□□□□ -1.97
CALCOCO2-223ENST00000514267 H3BQV1 296 aa2.72□□□□□ -1.97
CALCOCO2-223ENST00000514267 NBR2O15453 112 aa2.72□□□□□ -1.97
CALCOCO2-223ENST00000514267 PRKAB2O43741 272 aa2.72□□□□□ -1.97
CALCOCO2-223ENST00000514267 TIMM8AO60220 97 aaPredicted RBP2.72□□□□□ -1.97
CALCOCO2-223ENST00000514267 SRPX2O60687 465 aaPredicted RBP2.72□□□□□ -1.97
CALCOCO2-223ENST00000514267 PGK1P00558 417 aa2.72□□□□□ -1.97
CALCOCO2-223ENST00000514267 SERPINA3P01011 423 aa2.72□□□□□ -1.97
CALCOCO2-223ENST00000514267 CD55P08174 381 aa2.72□□□□□ -1.97
CALCOCO2-223ENST00000514267 DPEP1P16444 411 aa2.72□□□□□ -1.97
CALCOCO2-223ENST00000514267 MSNP26038 577 aaKnown RBP2.72□□□□□ -1.97
CALCOCO2-223ENST00000514267 NMT1P30419 496 aaKnown RBP2.72□□□□□ -1.97
CALCOCO2-223ENST00000514267 RPL34P49207 117 aaKnown RBP2.72□□□□□ -1.97
CALCOCO2-223ENST00000514267 HNRNPA3P51991 378 aaKnown RBP2.72□□□□□ -1.97
CALCOCO2-223ENST00000514267 KLRC3Q07444 240 aa2.72□□□□□ -1.97
CALCOCO2-223ENST00000514267 PUDPQ08623 228 aa2.72□□□□□ -1.97
CALCOCO2-223ENST00000514267 FCHO2Q0JRZ9 810 aa2.72□□□□□ -1.97
CALCOCO2-223ENST00000514267 CCDC173Q0VFZ6 552 aa2.72□□□□□ -1.97
CALCOCO2-223ENST00000514267 MRPL28Q13084 256 aaKnown RBP2.72□□□□□ -1.97
CALCOCO2-223ENST00000514267 ZNF154Q13106 437 aa2.72□□□□□ -1.97
CALCOCO2-223ENST00000514267 C1orf61Q13536 156 aa2.72□□□□□ -1.97
CALCOCO2-223ENST00000514267 PEX6Q13608 980 aa2.72□□□□□ -1.97
CALCOCO2-223ENST00000514267 CUL2Q13617 745 aa2.72□□□□□ -1.97
CALCOCO2-223ENST00000514267 LCE1FQ5T754 118 aa2.72□□□□□ -1.97
CALCOCO2-223ENST00000514267 TNS3Q68CZ2 1445 aa2.72□□□□□ -1.97
CALCOCO2-223ENST00000514267 OR4F3Q6IEY1 312 aa2.72□□□□□ -1.97
CALCOCO2-223ENST00000514267 CCDC73Q6ZRK6 1079 aa2.72□□□□□ -1.97
CALCOCO2-223ENST00000514267 SERPINA9Q86WD7 417 aa2.72□□□□□ -1.97
CALCOCO2-223ENST00000514267 CDR2LQ86X02 465 aaPredicted RBP2.72□□□□□ -1.97
CALCOCO2-223ENST00000514267 ZNF440Q8IYI8 595 aa2.72□□□□□ -1.97
CALCOCO2-223ENST00000514267 BBS5Q8N3I7 341 aa2.72□□□□□ -1.97
CALCOCO2-223ENST00000514267 FAM83FQ8NEG4 500 aaPredicted RBP2.72□□□□□ -1.97
CALCOCO2-223ENST00000514267 OR9K2Q8NGE7 335 aa2.72□□□□□ -1.97
CALCOCO2-223ENST00000514267 OR9A4Q8NGU2 314 aa2.72□□□□□ -1.97
CALCOCO2-223ENST00000514267 SLC2A14Q8TDB8 520 aa2.72□□□□□ -1.97
CALCOCO2-223ENST00000514267 MRPS31Q92665 395 aaKnown RBP2.72□□□□□ -1.97
CALCOCO2-223ENST00000514267 EFHD2Q96C19 240 aaPredicted RBP2.72□□□□□ -1.97
CALCOCO2-223ENST00000514267 RAB3CQ96E17 227 aa2.72□□□□□ -1.97
CALCOCO2-223ENST00000514267 OR5B2Q96R09 309 aa2.72□□□□□ -1.97
CALCOCO2-223ENST00000514267 LRRC61Q9BV99 259 aa2.72□□□□□ -1.97
CALCOCO2-223ENST00000514267 ZBP1Q9H171 429 aa2.72□□□□□ -1.97
CALCOCO2-223ENST00000514267 NXF5Q9H1B4 397 aaKnown RBP2.72□□□□□ -1.97
CALCOCO2-223ENST00000514267 SMYD3Q9H7B4 428 aa2.72□□□□□ -1.97
CALCOCO2-223ENST00000514267 METTL7AQ9H8H3 244 aa2.72□□□□□ -1.97
CALCOCO2-223ENST00000514267 RAB18Q9NP72 206 aa2.72□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms