RNA–Protein interactions for RNA: ENST00000513352.1

NUP54-213, Transcript of nucleoporin 54, humanhuman

TSL 4

Gene NUP54, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-213ENST00000513352 ZDHHC21Q8IVQ6 265 aa13.49□□□□□ -0.25
NUP54-213ENST00000513352 AQP12AQ8IXF9 295 aa13.49□□□□□ -0.25
NUP54-213ENST00000513352 PM20D2Q8IYS1 436 aa13.49□□□□□ -0.25
NUP54-213ENST00000513352 GALNT11Q8NCW6 608 aa13.49□□□□□ -0.25
NUP54-213ENST00000513352 FAM57AQ8TBR7 257 aa13.49□□□□□ -0.25
NUP54-213ENST00000513352 SLC25A43Q8WUT9 341 aaPredicted RBP13.49□□□□□ -0.25
NUP54-213ENST00000513352 POP5Q969H6 163 aaKnown RBP13.49□□□□□ -0.25
NUP54-213ENST00000513352 UTP4Q969X6 686 aaKnown RBP13.49□□□□□ -0.25
NUP54-213ENST00000513352 DDIT4LQ96D03 193 aa13.49□□□□□ -0.25
NUP54-213ENST00000513352 PRRC1Q96M27 445 aa13.49□□□□□ -0.25
NUP54-213ENST00000513352 KLHL15Q96M94 604 aa13.49□□□□□ -0.25
NUP54-213ENST00000513352 OR5B2Q96R09 309 aa13.49□□□□□ -0.25
NUP54-213ENST00000513352 FNDC11Q9BVV2 318 aa13.49□□□□□ -0.25
NUP54-213ENST00000513352 ADAM19Q9H013 955 aa13.49□□□□□ -0.25
NUP54-213ENST00000513352 RHCGQ9UBD6 479 aa13.49□□□□□ -0.25
NUP54-213ENST00000513352 PRDM4Q9UKN5 801 aa13.49□□□□□ -0.25
NUP54-213ENST00000513352 OSGIN2Q9Y236 505 aa13.49□□□□□ -0.25
NUP54-213ENST00000513352 ENPP4Q9Y6X5 453 aa13.49□□□□□ -0.25
NUP54-213ENST00000513352 ESPL1Q14674 2120 aa13.48□□□□□ -0.25
NUP54-213ENST00000513352 A0A0B4J2E0 115 aa13.48□□□□□ -0.25
NUP54-213ENST00000513352 TRGV8A0A0C4DH27 118 aa13.48□□□□□ -0.25
NUP54-213ENST00000513352 A0A1B0GX12 115 aa13.48□□□□□ -0.25
NUP54-213ENST00000513352 DHRS12A0PJE2 317 aa13.48□□□□□ -0.25
NUP54-213ENST00000513352 H0YC42 278 aa13.48□□□□□ -0.25
NUP54-213ENST00000513352 TNFSF11O14788 317 aa13.48□□□□□ -0.25
NUP54-213ENST00000513352 EFNA2O43921 213 aa13.48□□□□□ -0.25
NUP54-213ENST00000513352 DIRAS1O95057 198 aa13.48□□□□□ -0.25
NUP54-213ENST00000513352 OR5F1O95221 314 aa13.48□□□□□ -0.25
NUP54-213ENST00000513352 PNMTP11086 282 aa13.48□□□□□ -0.25
NUP54-213ENST00000513352 NQO1P15559 274 aaKnown RBP13.48□□□□□ -0.25
NUP54-213ENST00000513352 ZNF708P17019 499 aa13.48□□□□□ -0.25
NUP54-213ENST00000513352 ITGA2P17301 1181 aa13.48□□□□□ -0.25
NUP54-213ENST00000513352 GNLYP22749 145 aa13.48□□□□□ -0.25
NUP54-213ENST00000513352 SHC1P29353 583 aa13.48□□□□□ -0.25
NUP54-213ENST00000513352 EIF1AXP47813 144 aaKnown RBP13.48□□□□□ -0.25
NUP54-213ENST00000513352 TPD52P55327 224 aaPredicted RBP13.48□□□□□ -0.25
NUP54-213ENST00000513352 RPS3AP61247 264 aaKnown RBP13.48□□□□□ -0.25
NUP54-213ENST00000513352 VLDLRP98155 873 aa13.48□□□□□ -0.25
NUP54-213ENST00000513352 PIN1Q13526 163 aaPredicted RBP13.48□□□□□ -0.25
NUP54-213ENST00000513352 GXYLT1Q4G148 440 aa13.48□□□□□ -0.25
NUP54-213ENST00000513352 SYT14P1Q58G82 188 aa13.48□□□□□ -0.25
NUP54-213ENST00000513352 PDSS1Q5T2R2 415 aa13.48□□□□□ -0.25
NUP54-213ENST00000513352 C3P1Q6ZMU1 363 aa13.48□□□□□ -0.25
NUP54-213ENST00000513352 TSPYL5Q86VY4 417 aaPredicted RBP13.48□□□□□ -0.25
NUP54-213ENST00000513352 CHERPQ8IWX8 916 aaKnown RBP13.48□□□□□ -0.25
NUP54-213ENST00000513352 WDYHV1Q96HA8 205 aa13.48□□□□□ -0.25
NUP54-213ENST00000513352 OR11A1Q9GZK7 315 aa13.48□□□□□ -0.25
NUP54-213ENST00000513352 POLR2J2Q9GZM3 115 aaKnown RBP13.48□□□□□ -0.25
NUP54-213ENST00000513352 POLR2J3Q9H1A7 115 aaKnown RBP13.48□□□□□ -0.25
NUP54-213ENST00000513352 RIMS3Q9UJD0 308 aa13.48□□□□□ -0.25
NUP54-213ENST00000513352 TINAGQ9UJW2 476 aa13.48□□□□□ -0.25
NUP54-213ENST00000513352 A0A1W2PNR3 127 aa13.47□□□□□ -0.25
NUP54-213ENST00000513352 FIGNL2A6NMB9 653 aa13.47□□□□□ -0.25
NUP54-213ENST00000513352 PYCARD-AS1I3L0S3 204 aa13.47□□□□□ -0.25
NUP54-213ENST00000513352 CHP2O43745 196 aa13.47□□□□□ -0.25
NUP54-213ENST00000513352 CPN1P15169 458 aa13.47□□□□□ -0.25
NUP54-213ENST00000513352 UQCRFS1P47985 274 aa13.47□□□□□ -0.25
NUP54-213ENST00000513352 SUCLG1P53597 346 aaKnown RBP13.47□□□□□ -0.25
NUP54-213ENST00000513352 DLX5P56178 289 aa13.47□□□□□ -0.25
NUP54-213ENST00000513352 CLDN18P56856 261 aa13.47□□□□□ -0.25
NUP54-213ENST00000513352 SPIBQ01892 262 aa13.47□□□□□ -0.25
NUP54-213ENST00000513352 BCL2A1Q16548 175 aa13.47□□□□□ -0.25
NUP54-213ENST00000513352 SGCBQ16585 318 aa13.47□□□□□ -0.25
NUP54-213ENST00000513352 SWT1Q5T5J6 900 aaKnown RBP13.47□□□□□ -0.25
NUP54-213ENST00000513352 HBMQ6B0K9 141 aa13.47□□□□□ -0.25
NUP54-213ENST00000513352 ESPNLQ6ZVH7 1005 aa13.47□□□□□ -0.25
NUP54-213ENST00000513352 GDF7Q7Z4P5 450 aa13.47□□□□□ -0.25
NUP54-213ENST00000513352 GGNQ86UU5 652 aa13.47□□□□□ -0.25
NUP54-213ENST00000513352 P3H2Q8IVL5 708 aa13.47□□□□□ -0.25
NUP54-213ENST00000513352 ADGRG5Q8IZF4 528 aa13.47□□□□□ -0.25
NUP54-213ENST00000513352 PRR7Q8TB68 274 aa13.47□□□□□ -0.25
NUP54-213ENST00000513352 PHF10Q8WUB8 498 aaKnown RBP13.47□□□□□ -0.25
NUP54-213ENST00000513352 CANT1Q8WVQ1 401 aa13.47□□□□□ -0.25
NUP54-213ENST00000513352 C7orf34Q96L11 122 aa13.47□□□□□ -0.25
NUP54-213ENST00000513352 MAGIXQ9H6Y5 334 aa13.47□□□□□ -0.25
NUP54-213ENST00000513352 NDUFAF4Q9P032 175 aa13.47□□□□□ -0.25
NUP54-213ENST00000513352 TESMINQ9Y4I5 508 aa13.47□□□□□ -0.25
NUP54-213ENST00000513352 CFAP46Q8IYW2 2715 aa13.46□□□□□ -0.25
NUP54-213ENST00000513352 A0A0J9YW62 118 aa13.46□□□□□ -0.25
NUP54-213ENST00000513352 ZC3H12DA2A288 527 aaKnown RBP13.46□□□□□ -0.25
NUP54-213ENST00000513352 A8MVM7 634 aa13.46□□□□□ -0.25
NUP54-213ENST00000513352 ANKRD65E5RJM6 399 aa13.46□□□□□ -0.25
NUP54-213ENST00000513352 ZNF208O43345 1280 aa13.46□□□□□ -0.25
NUP54-213ENST00000513352 CXCL13O43927 109 aa13.46□□□□□ -0.25
NUP54-213ENST00000513352 SEMG1P04279 462 aa13.46□□□□□ -0.25
NUP54-213ENST00000513352 GPIP06744 558 aa13.46□□□□□ -0.25
NUP54-213ENST00000513352 RAP2AP10114 183 aa13.46□□□□□ -0.25
NUP54-213ENST00000513352 UMPSP11172 480 aa13.46□□□□□ -0.25
NUP54-213ENST00000513352 RHCEP18577 417 aa13.46□□□□□ -0.25
NUP54-213ENST00000513352 CLDN15P56746 228 aa13.46□□□□□ -0.25
NUP54-213ENST00000513352 ST3GAL3Q11203 375 aa13.46□□□□□ -0.25
NUP54-213ENST00000513352 KPNB1Q14974 876 aaKnown RBP13.46□□□□□ -0.25
NUP54-213ENST00000513352 FGD3Q5JSP0 725 aa13.46□□□□□ -0.25
NUP54-213ENST00000513352 C1QL3Q5VWW1 255 aa13.46□□□□□ -0.25
NUP54-213ENST00000513352 TTC33Q6PID6 262 aaPredicted RBP13.46□□□□□ -0.25
NUP54-213ENST00000513352 OFCC1Q8IZS5 231 aa13.46□□□□□ -0.25
NUP54-213ENST00000513352 C10orf53Q8N6V4 93 aa13.46□□□□□ -0.25
NUP54-213ENST00000513352 OR2V1Q8NHB1 315 aa13.46□□□□□ -0.25
NUP54-213ENST00000513352 SLC38A4Q969I6 547 aa13.46□□□□□ -0.25
NUP54-213ENST00000513352 ZNF300Q96RE9 604 aaPredicted RBP13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms