RNA–Protein interactions for RNA: ENST00000513341.5

PDLIM5-218, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-218ENST00000513341 IGLV5-39A0A0G2JS06 123 aa3.19□□□□□ -1.9
PDLIM5-218ENST00000513341 SHISA9B4DS77 424 aa3.19□□□□□ -1.9
PDLIM5-218ENST00000513341 B4DSR2 109 aa3.19□□□□□ -1.9
PDLIM5-218ENST00000513341 C4orf51C9J302 202 aa3.19□□□□□ -1.9
PDLIM5-218ENST00000513341 E7EVH7 732 aa3.19□□□□□ -1.9
PDLIM5-218ENST00000513341 GOLGA8TH3BQL2 631 aa3.19□□□□□ -1.9
PDLIM5-218ENST00000513341 DNPH1O43598 174 aa3.19□□□□□ -1.9
PDLIM5-218ENST00000513341 SS18L1O75177 396 aaPredicted RBP3.19□□□□□ -1.9
PDLIM5-218ENST00000513341 SCELO95171 688 aa3.19□□□□□ -1.9
PDLIM5-218ENST00000513341 VAPBO95292 243 aa3.19□□□□□ -1.9
PDLIM5-218ENST00000513341 GPR75O95800 540 aa3.19□□□□□ -1.9
PDLIM5-218ENST00000513341 TACSTD2P09758 323 aa3.19□□□□□ -1.9
PDLIM5-218ENST00000513341 SLC35E2BP0CK96 405 aa3.19□□□□□ -1.9
PDLIM5-218ENST00000513341 SLC35E2P0CK97 266 aa3.19□□□□□ -1.9
PDLIM5-218ENST00000513341 C1GALT1C1LP0DN25 315 aa3.19□□□□□ -1.9
PDLIM5-218ENST00000513341 HIST1H1TP22492 207 aaPredicted RBP3.19□□□□□ -1.9
PDLIM5-218ENST00000513341 PTAFRP25105 342 aa3.19□□□□□ -1.9
PDLIM5-218ENST00000513341 GIFP27352 417 aa3.19□□□□□ -1.9
PDLIM5-218ENST00000513341 ABCD3P28288 659 aa3.19□□□□□ -1.9
PDLIM5-218ENST00000513341 HNRNPH1P31943 449 aaKnown RBP3.19□□□□□ -1.9
PDLIM5-218ENST00000513341 PTGDSP41222 190 aa3.19□□□□□ -1.9
PDLIM5-218ENST00000513341 CCT5P48643 541 aa3.19□□□□□ -1.9
PDLIM5-218ENST00000513341 HNMTP50135 292 aa3.19□□□□□ -1.9
PDLIM5-218ENST00000513341 DSCR4P56555 118 aaPredicted RBP3.19□□□□□ -1.9
PDLIM5-218ENST00000513341 CLDN15P56746 228 aa3.19□□□□□ -1.9
PDLIM5-218ENST00000513341 B3GALT5-AS1P59052 145 aa3.19□□□□□ -1.9
PDLIM5-218ENST00000513341 PLIN5Q00G26 463 aa3.19□□□□□ -1.9
PDLIM5-218ENST00000513341 HMGCS1Q01581 520 aa3.19□□□□□ -1.9
PDLIM5-218ENST00000513341 ITGADQ13349 1161 aa3.19□□□□□ -1.9
PDLIM5-218ENST00000513341 MORF4L2Q15014 288 aa3.19□□□□□ -1.9
PDLIM5-218ENST00000513341 SGCBQ16585 318 aa3.19□□□□□ -1.9
PDLIM5-218ENST00000513341 ZSWIM7Q19AV6 140 aa3.19□□□□□ -1.9
PDLIM5-218ENST00000513341 CTU2Q2VPK5 515 aaKnown RBP3.19□□□□□ -1.9
PDLIM5-218ENST00000513341 TMEM35AQ53FP2 167 aa3.19□□□□□ -1.9
PDLIM5-218ENST00000513341 WDR93Q6P2C0 686 aa3.19□□□□□ -1.9
PDLIM5-218ENST00000513341 SASS6Q6UVJ0 657 aa3.19□□□□□ -1.9
PDLIM5-218ENST00000513341 C4orf22Q6V702 233 aa3.19□□□□□ -1.9
PDLIM5-218ENST00000513341 RBM43Q6ZSC3 357 aaKnown RBP3.19□□□□□ -1.9
PDLIM5-218ENST00000513341 Q6ZSR9 355 aa3.19□□□□□ -1.9
PDLIM5-218ENST00000513341 CENPUQ71F23 418 aa3.19□□□□□ -1.9
PDLIM5-218ENST00000513341 CCDC25Q86WR0 208 aa3.19□□□□□ -1.9
PDLIM5-218ENST00000513341 GABRG1Q8N1C3 465 aa3.19□□□□□ -1.9
PDLIM5-218ENST00000513341 RNF10Q8N5U6 811 aaKnown RBP3.19□□□□□ -1.9
PDLIM5-218ENST00000513341 ACOT4Q8N9L9 421 aa3.19□□□□□ -1.9
PDLIM5-218ENST00000513341 SNX31Q8N9S9 440 aa3.19□□□□□ -1.9
PDLIM5-218ENST00000513341 FAM47BQ8NA70 645 aa3.19□□□□□ -1.9
PDLIM5-218ENST00000513341 ADPRHL1Q8NDY3 354 aa3.19□□□□□ -1.9
PDLIM5-218ENST00000513341 OR7G1Q8NGA0 311 aa3.19□□□□□ -1.9
PDLIM5-218ENST00000513341 FNDC9Q8TBE3 224 aa3.19□□□□□ -1.9
PDLIM5-218ENST00000513341 KCTD4Q8WVF5 259 aa3.19□□□□□ -1.9
PDLIM5-218ENST00000513341 NEUROG1Q92886 237 aa3.19□□□□□ -1.9
PDLIM5-218ENST00000513341 ADIPOR1Q96A54 375 aa3.19□□□□□ -1.9
PDLIM5-218ENST00000513341 PPWD1Q96BP3 646 aaKnown RBP3.19□□□□□ -1.9
PDLIM5-218ENST00000513341 S100PBPQ96BU1 408 aa3.19□□□□□ -1.9
PDLIM5-218ENST00000513341 FBXL8Q96CD0 374 aa3.19□□□□□ -1.9
PDLIM5-218ENST00000513341 MUCL1Q96DR8 90 aa3.19□□□□□ -1.9
PDLIM5-218ENST00000513341 PDLIM5Q96HC4 596 aaKnown RBP3.19□□□□□ -1.9
PDLIM5-218ENST00000513341 REXO5Q96IC2 774 aaKnown RBP3.19□□□□□ -1.9
PDLIM5-218ENST00000513341 VPS39Q96JC1 886 aa3.19□□□□□ -1.9
PDLIM5-218ENST00000513341 NAP1L5Q96NT1 182 aaPredicted RBP3.19□□□□□ -1.9
PDLIM5-218ENST00000513341 FOXN4Q96NZ1 517 aa3.19□□□□□ -1.9
PDLIM5-218ENST00000513341 GAL3ST4Q96RP7 486 aa3.19□□□□□ -1.9
PDLIM5-218ENST00000513341 HBEGFQ99075 208 aa3.19□□□□□ -1.9
PDLIM5-218ENST00000513341 LRRC1Q9BTT6 524 aa3.19□□□□□ -1.9
PDLIM5-218ENST00000513341 SUCNR1Q9BXA5 334 aa3.19□□□□□ -1.9
PDLIM5-218ENST00000513341 PINK1Q9BXM7 581 aa3.19□□□□□ -1.9
PDLIM5-218ENST00000513341 RSPO3Q9BXY4 272 aaPredicted RBP3.19□□□□□ -1.9
PDLIM5-218ENST00000513341 PRRG4Q9BZD6 226 aa3.19□□□□□ -1.9
PDLIM5-218ENST00000513341 DDX47Q9H0S4 455 aaKnown RBP3.19□□□□□ -1.9
PDLIM5-218ENST00000513341 SPNS1Q9H2V7 528 aa3.19□□□□□ -1.9
PDLIM5-218ENST00000513341 RPF2Q9H7B2 306 aaKnown RBP3.19□□□□□ -1.9
PDLIM5-218ENST00000513341 METTL17Q9H7H0 456 aaPredicted RBP3.19□□□□□ -1.9
PDLIM5-218ENST00000513341 NTN4Q9HB63 628 aa3.19□□□□□ -1.9
PDLIM5-218ENST00000513341 ARL15Q9NXU5 204 aa3.19□□□□□ -1.9
PDLIM5-218ENST00000513341 NDUFAF4Q9P032 175 aa3.19□□□□□ -1.9
PDLIM5-218ENST00000513341 GTF2A1LQ9UNN4 478 aa3.19□□□□□ -1.9
PDLIM5-218ENST00000513341 FKBP7Q9Y680 259 aa3.19□□□□□ -1.9
PDLIM5-218ENST00000513341 AP4B1Q9Y6B7 739 aa3.19□□□□□ -1.9
PDLIM5-218ENST00000513341 SIRT4Q9Y6E7 314 aaPredicted RBP3.19□□□□□ -1.9
PDLIM5-218ENST00000513341 EXPH5Q8NEV8 1989 aa3.19□□□□□ -1.9
PDLIM5-218ENST00000513341 TENM3Q9P273 2699 aa3.18□□□□□ -1.9
PDLIM5-218ENST00000513341 IGHV4-61A0A0C4DH41 118 aa3.18□□□□□ -1.9
PDLIM5-218ENST00000513341 CTAGE15A4D2H0 777 aa3.18□□□□□ -1.9
PDLIM5-218ENST00000513341 CTAGE9A4FU28 777 aa3.18□□□□□ -1.9
PDLIM5-218ENST00000513341 OR6C70A6NIJ9 312 aa3.18□□□□□ -1.9
PDLIM5-218ENST00000513341 E7EQL1 145 aa3.18□□□□□ -1.9
PDLIM5-218ENST00000513341 CLIC1O00299 241 aa3.18□□□□□ -1.9
PDLIM5-218ENST00000513341 ABCD4O14678 606 aa3.18□□□□□ -1.9
PDLIM5-218ENST00000513341 TO15178 435 aa3.18□□□□□ -1.9
PDLIM5-218ENST00000513341 ACOX3O15254 700 aa3.18□□□□□ -1.9
PDLIM5-218ENST00000513341 FGF17O60258 216 aa3.18□□□□□ -1.9
PDLIM5-218ENST00000513341 RAMP1O60894 148 aa3.18□□□□□ -1.9
PDLIM5-218ENST00000513341 PRKRAO75569 313 aaKnown RBP3.18□□□□□ -1.9
PDLIM5-218ENST00000513341 GCM2O75603 506 aaPredicted RBP3.18□□□□□ -1.9
PDLIM5-218ENST00000513341 LRATO95237 230 aa3.18□□□□□ -1.9
PDLIM5-218ENST00000513341 PGM3O95394 542 aa3.18□□□□□ -1.9
PDLIM5-218ENST00000513341 TNFRSF6BO95407 300 aa3.18□□□□□ -1.9
PDLIM5-218ENST00000513341 TBX6O95947 436 aaPredicted RBP3.18□□□□□ -1.9
PDLIM5-218ENST00000513341 PLGP00747 810 aaPredicted RBP3.18□□□□□ -1.9
PDLIM5-218ENST00000513341 TUBBP07437 444 aa3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms