RNA–Protein interactions for RNA: ENST00000512476.1

TRAPPC11-209, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC11, Length 2,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-209ENST00000512476 COL4A1P02462 1669 aa5.66□□□□□ -1.5
TRAPPC11-209ENST00000512476 KCNE1BA0A087WTH5 132 aa5.66□□□□□ -1.5
TRAPPC11-209ENST00000512476 SMIM23A6NLE4 172 aa5.66□□□□□ -1.5
TRAPPC11-209ENST00000512476 C2CD4BA6NLJ0 364 aa5.66□□□□□ -1.5
TRAPPC11-209ENST00000512476 PPP1R2P9O14990 202 aa5.66□□□□□ -1.5
TRAPPC11-209ENST00000512476 CYP26A1O43174 497 aa5.66□□□□□ -1.5
TRAPPC11-209ENST00000512476 C1RP00736 705 aa5.66□□□□□ -1.5
TRAPPC11-209ENST00000512476 CRYABP02511 175 aaKnown RBP5.66□□□□□ -1.5
TRAPPC11-209ENST00000512476 PSMC3P17980 439 aa5.66□□□□□ -1.5
TRAPPC11-209ENST00000512476 KITLGP21583 273 aa5.66□□□□□ -1.5
TRAPPC11-209ENST00000512476 GATA3P23771 443 aa5.66□□□□□ -1.5
TRAPPC11-209ENST00000512476 FCARP24071 287 aa5.66□□□□□ -1.5
TRAPPC11-209ENST00000512476 ADORA1P30542 326 aa5.66□□□□□ -1.5
TRAPPC11-209ENST00000512476 TMPRSS3P57727 454 aa5.66□□□□□ -1.5
TRAPPC11-209ENST00000512476 JAG1P78504 1218 aa5.66□□□□□ -1.5
TRAPPC11-209ENST00000512476 PSG6Q00889 435 aa5.66□□□□□ -1.5
TRAPPC11-209ENST00000512476 NDUFA9Q16795 377 aa5.66□□□□□ -1.5
TRAPPC11-209ENST00000512476 FCRLAQ7L513 359 aa5.66□□□□□ -1.5
TRAPPC11-209ENST00000512476 LINC01561Q8N1V8 128 aa5.66□□□□□ -1.5
TRAPPC11-209ENST00000512476 PHF10Q8WUB8 498 aaKnown RBP5.66□□□□□ -1.5
TRAPPC11-209ENST00000512476 SNAPC3Q92966 411 aa5.66□□□□□ -1.5
TRAPPC11-209ENST00000512476 WDR34Q96EX3 536 aa5.66□□□□□ -1.5
TRAPPC11-209ENST00000512476 TEPSINQ96N21 525 aa5.66□□□□□ -1.5
TRAPPC11-209ENST00000512476 PRAP1Q96NZ9 151 aa5.66□□□□□ -1.5
TRAPPC11-209ENST00000512476 SLC22A12Q96S37 553 aa5.66□□□□□ -1.5
TRAPPC11-209ENST00000512476 ZNF426Q9BUY5 554 aa5.66□□□□□ -1.5
TRAPPC11-209ENST00000512476 TMEM109Q9BVC6 243 aa5.66□□□□□ -1.5
TRAPPC11-209ENST00000512476 C5orf66Q9H5L9 145 aa5.66□□□□□ -1.5
TRAPPC11-209ENST00000512476 ZNF665Q9H7R5 613 aa5.66□□□□□ -1.5
TRAPPC11-209ENST00000512476 RETNQ9HD89 108 aa5.66□□□□□ -1.5
TRAPPC11-209ENST00000512476 FZD3Q9NPG1 666 aa5.66□□□□□ -1.5
TRAPPC11-209ENST00000512476 PRDM7Q9NQW5 492 aa5.66□□□□□ -1.5
TRAPPC11-209ENST00000512476 DLL3Q9NYJ7 618 aa5.66□□□□□ -1.5
TRAPPC11-209ENST00000512476 OPN4Q9UHM6 478 aa5.66□□□□□ -1.5
TRAPPC11-209ENST00000512476 CSNK1G3Q9Y6M4 447 aa5.66□□□□□ -1.5
TRAPPC11-209ENST00000512476 TRAV18A0A075B6X5 111 aa5.65□□□□□ -1.5
TRAPPC11-209ENST00000512476 KBTBD11-OT1A0A1B0GTJ5 212 aa5.65□□□□□ -1.5
TRAPPC11-209ENST00000512476 PEX10O60683 326 aa5.65□□□□□ -1.5
TRAPPC11-209ENST00000512476 SUPT3HO75486 399 aa5.65□□□□□ -1.5
TRAPPC11-209ENST00000512476 MED6O75586 246 aa5.65□□□□□ -1.5
TRAPPC11-209ENST00000512476 UTS2O95399 124 aa5.65□□□□□ -1.5
TRAPPC11-209ENST00000512476 LDOC1O95751 146 aaPredicted RBP5.65□□□□□ -1.5
TRAPPC11-209ENST00000512476 KNG1P01042 644 aa5.65□□□□□ -1.5
TRAPPC11-209ENST00000512476 TNNC2P02585 160 aa5.65□□□□□ -1.5
TRAPPC11-209ENST00000512476 CRISP1P54107 249 aa5.65□□□□□ -1.5
TRAPPC11-209ENST00000512476 KLC1Q07866 573 aa5.65□□□□□ -1.5
TRAPPC11-209ENST00000512476 ZP4Q12836 540 aa5.65□□□□□ -1.5
TRAPPC11-209ENST00000512476 DMRTC1Q5HYR2 192 aa5.65□□□□□ -1.5
TRAPPC11-209ENST00000512476 OTUD3Q5T2D3 398 aaPredicted RBP5.65□□□□□ -1.5
TRAPPC11-209ENST00000512476 HES5Q5TA89 166 aa5.65□□□□□ -1.5
TRAPPC11-209ENST00000512476 PXDC1Q5TGL8 231 aa5.65□□□□□ -1.5
TRAPPC11-209ENST00000512476 CDC42EP5Q6NZY7 148 aa5.65□□□□□ -1.5
TRAPPC11-209ENST00000512476 LCLAT1Q6UWP7 414 aa5.65□□□□□ -1.5
TRAPPC11-209ENST00000512476 SH2D5Q6ZV89 423 aa5.65□□□□□ -1.5
TRAPPC11-209ENST00000512476 MOB2Q70IA6 237 aa5.65□□□□□ -1.5
TRAPPC11-209ENST00000512476 GSPT2Q8IYD1 628 aaKnown RBP5.65□□□□□ -1.5
TRAPPC11-209ENST00000512476 LGALS14Q8TCE9 139 aa5.65□□□□□ -1.5
TRAPPC11-209ENST00000512476 MCOLN3Q8TDD5 553 aa5.65□□□□□ -1.5
TRAPPC11-209ENST00000512476 FAM172AQ8WUF8 416 aa5.65□□□□□ -1.5
TRAPPC11-209ENST00000512476 CPNE4Q96A23 557 aaPredicted RBP5.65□□□□□ -1.5
TRAPPC11-209ENST00000512476 DHRS9Q9BPW9 319 aa5.65□□□□□ -1.5
TRAPPC11-209ENST00000512476 DCUN1D5Q9BTE7 237 aa5.65□□□□□ -1.5
TRAPPC11-209ENST00000512476 NDUFAF3Q9BU61 184 aa5.65□□□□□ -1.5
TRAPPC11-209ENST00000512476 ACTRT3Q9BYD9 372 aa5.65□□□□□ -1.5
TRAPPC11-209ENST00000512476 C11orf49Q9H6J7 331 aa5.65□□□□□ -1.5
TRAPPC11-209ENST00000512476 LRRC4CQ9HCJ2 640 aa5.65□□□□□ -1.5
TRAPPC11-209ENST00000512476 IL36GQ9NZH8 169 aa5.65□□□□□ -1.5
TRAPPC11-209ENST00000512476 CLN8Q9UBY8 286 aa5.65□□□□□ -1.5
TRAPPC11-209ENST00000512476 ST3GAL5Q9UNP4 418 aa5.65□□□□□ -1.5
TRAPPC11-209ENST00000512476 MRPS28Q9Y2Q9 187 aaKnown RBP5.65□□□□□ -1.5
TRAPPC11-209ENST00000512476 TNRC6CQ9HCJ0 1690 aaKnown RBP5.65□□□□□ -1.5
TRAPPC11-209ENST00000512476 SPEF2Q9C093 1822 aa5.65□□□□□ -1.51
TRAPPC11-209ENST00000512476 ARAP2Q8WZ64 1704 aa5.65□□□□□ -1.51
TRAPPC11-209ENST00000512476 CASTOR2A6NHX0 329 aa5.65□□□□□ -1.51
TRAPPC11-209ENST00000512476 FBP2O00757 339 aa5.65□□□□□ -1.51
TRAPPC11-209ENST00000512476 SLC9A3R1O14745 358 aaPredicted RBP5.65□□□□□ -1.51
TRAPPC11-209ENST00000512476 MLNRO43193 412 aa5.65□□□□□ -1.51
TRAPPC11-209ENST00000512476 HYAL3O43820 417 aaPredicted RBP5.65□□□□□ -1.51
TRAPPC11-209ENST00000512476 BAG3O95817 575 aa5.65□□□□□ -1.51
TRAPPC11-209ENST00000512476 IL6RP08887 468 aaPredicted RBP5.65□□□□□ -1.51
TRAPPC11-209ENST00000512476 VSIG10L2P0DP72 767 aa5.65□□□□□ -1.51
TRAPPC11-209ENST00000512476 MATN1P21941 496 aa5.65□□□□□ -1.51
TRAPPC11-209ENST00000512476 CD96P40200 585 aa5.65□□□□□ -1.51
TRAPPC11-209ENST00000512476 NOVA1P51513 510 aaKnown RBP5.65□□□□□ -1.51
TRAPPC11-209ENST00000512476 LBX1P52954 281 aa5.65□□□□□ -1.51
TRAPPC11-209ENST00000512476 CLDN18P56856 261 aa5.65□□□□□ -1.51
TRAPPC11-209ENST00000512476 ITGA9Q13797 1035 aa5.65□□□□□ -1.51
TRAPPC11-209ENST00000512476 PTPN20Q4JDL3 420 aa5.65□□□□□ -1.51
TRAPPC11-209ENST00000512476 PIGGQ5H8A4 983 aa5.65□□□□□ -1.51
TRAPPC11-209ENST00000512476 NKAPLQ5M9Q1 402 aa5.65□□□□□ -1.51
TRAPPC11-209ENST00000512476 CWC27Q6UX04 472 aaKnown RBP5.65□□□□□ -1.51
TRAPPC11-209ENST00000512476 Q7L0L9 218 aa5.65□□□□□ -1.51
TRAPPC11-209ENST00000512476 WDR53Q7Z5U6 358 aaPredicted RBP5.65□□□□□ -1.51
TRAPPC11-209ENST00000512476 SLC38A9Q8NBW4 561 aa5.65□□□□□ -1.51
TRAPPC11-209ENST00000512476 RNF133Q8WVZ7 376 aa5.65□□□□□ -1.51
TRAPPC11-209ENST00000512476 ISOC2Q96AB3 205 aa5.65□□□□□ -1.51
TRAPPC11-209ENST00000512476 KRTAP3-3Q9BYR6 98 aa5.65□□□□□ -1.51
TRAPPC11-209ENST00000512476 KRTAP3-2Q9BYR7 98 aa5.65□□□□□ -1.51
TRAPPC11-209ENST00000512476 LHPPQ9H008 270 aa5.65□□□□□ -1.51
TRAPPC11-209ENST00000512476 PORCNQ9H237 461 aa5.65□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms