RNA–Protein interactions for RNA: ENST00000512151.5

NUP54-211, Transcript of nucleoporin 54, humanhuman

TSL 2

Gene NUP54, Length 1,385 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-211ENST00000512151 PSG6Q00889 435 aa7.93□□□□□ -1.14
NUP54-211ENST00000512151 IFT88Q13099 833 aa7.93□□□□□ -1.14
NUP54-211ENST00000512151 CUL3Q13618 768 aa7.93□□□□□ -1.14
NUP54-211ENST00000512151 PLPPR5Q32ZL2 321 aa7.93□□□□□ -1.14
NUP54-211ENST00000512151 SLC9B1Q4ZJI4 515 aa7.93□□□□□ -1.14
NUP54-211ENST00000512151 XKR7Q5GH72 579 aa7.93□□□□□ -1.14
NUP54-211ENST00000512151 CPTPQ5TA50 214 aa7.93□□□□□ -1.14
NUP54-211ENST00000512151 FAHD2BQ6P2I3 314 aaPredicted RBP7.93□□□□□ -1.14
NUP54-211ENST00000512151 Q6ZPA2 131 aa7.93□□□□□ -1.14
NUP54-211ENST00000512151 RNF165Q6ZSG1 346 aa7.93□□□□□ -1.14
NUP54-211ENST00000512151 SSX8Q7RTT4 187 aa7.93□□□□□ -1.14
NUP54-211ENST00000512151 TRIM46Q7Z4K8 759 aa7.93□□□□□ -1.14
NUP54-211ENST00000512151 CLDND2Q8NHS1 167 aa7.93□□□□□ -1.14
NUP54-211ENST00000512151 RFWD2Q8NHY2 731 aa7.93□□□□□ -1.14
NUP54-211ENST00000512151 C22orf15Q8WYQ4 148 aa7.93□□□□□ -1.14
NUP54-211ENST00000512151 KLHL29Q96CT2 875 aa7.93□□□□□ -1.14
NUP54-211ENST00000512151 FAHD2AQ96GK7 314 aa7.93□□□□□ -1.14
NUP54-211ENST00000512151 APIPQ96GX9 242 aa7.93□□□□□ -1.14
NUP54-211ENST00000512151 PPP1R36Q96LQ0 422 aa7.93□□□□□ -1.14
NUP54-211ENST00000512151 C1orf147Q96MC9 270 aaPredicted RBP7.93□□□□□ -1.14
NUP54-211ENST00000512151 PSD2Q9BQI7 771 aa7.93□□□□□ -1.14
NUP54-211ENST00000512151 NUF2Q9BZD4 464 aa7.93□□□□□ -1.14
NUP54-211ENST00000512151 SLITRK2Q9H156 845 aa7.93□□□□□ -1.14
NUP54-211ENST00000512151 ELOVL6Q9H5J4 265 aa7.93□□□□□ -1.14
NUP54-211ENST00000512151 COQ10BQ9H8M1 238 aa7.93□□□□□ -1.14
NUP54-211ENST00000512151 BCO1Q9HAY6 547 aa7.93□□□□□ -1.14
NUP54-211ENST00000512151 GP6Q9HCN6 339 aa7.93□□□□□ -1.14
NUP54-211ENST00000512151 MED17Q9NVC6 651 aa7.93□□□□□ -1.14
NUP54-211ENST00000512151 FGFR1OP2Q9NVK5 253 aa7.93□□□□□ -1.14
NUP54-211ENST00000512151 NTMQ9P121 344 aa7.93□□□□□ -1.14
NUP54-211ENST00000512151 STOML1Q9UBI4 398 aa7.93□□□□□ -1.14
NUP54-211ENST00000512151 MOKQ9UQ07 419 aa7.93□□□□□ -1.14
NUP54-211ENST00000512151 GRIP1Q9Y3R0 1128 aa7.93□□□□□ -1.14
NUP54-211ENST00000512151 C7orf72A4D263 438 aa7.92□□□□□ -1.14
NUP54-211ENST00000512151 CCT8L1PA6NM43 557 aa7.92□□□□□ -1.14
NUP54-211ENST00000512151 POM121CA8CG34 1229 aa7.92□□□□□ -1.14
NUP54-211ENST00000512151 SDHDO14521 159 aa7.92□□□□□ -1.14
NUP54-211ENST00000512151 SNX3O60493 162 aa7.92□□□□□ -1.14
NUP54-211ENST00000512151 PDE5AO76074 875 aa7.92□□□□□ -1.14
NUP54-211ENST00000512151 IL33O95760 270 aa7.92□□□□□ -1.14
NUP54-211ENST00000512151 ANGPTL1O95841 491 aa7.92□□□□□ -1.14
NUP54-211ENST00000512151 IFNGR1P15260 489 aa7.92□□□□□ -1.14
NUP54-211ENST00000512151 IDH3GP51553 393 aaPredicted RBP7.92□□□□□ -1.14
NUP54-211ENST00000512151 RAE1P78406 368 aaKnown RBP7.92□□□□□ -1.14
NUP54-211ENST00000512151 MRPS22P82650 360 aaKnown RBP7.92□□□□□ -1.14
NUP54-211ENST00000512151 SF3A3Q12874 501 aaKnown RBP eCLIP7.92□□□□□ -1.14
NUP54-211ENST00000512151 KIAA0040Q15053 153 aa7.92□□□□□ -1.14
NUP54-211ENST00000512151 GRAMD1BQ3KR37 738 aa7.92□□□□□ -1.14
NUP54-211ENST00000512151 RFTN2Q52LD8 501 aaPredicted RBP7.92□□□□□ -1.14
NUP54-211ENST00000512151 PDSS1Q5T2R2 415 aa7.92□□□□□ -1.14
NUP54-211ENST00000512151 CCDC121Q6ZUS5 278 aa7.92□□□□□ -1.14
NUP54-211ENST00000512151 C1QL2Q7Z5L3 287 aa7.92□□□□□ -1.14
NUP54-211ENST00000512151 SPATA19Q7Z5L4 167 aa7.92□□□□□ -1.14
NUP54-211ENST00000512151 DDIASQ8IXT1 998 aa7.92□□□□□ -1.14
NUP54-211ENST00000512151 LILRA2Q8N149 483 aa7.92□□□□□ -1.14
NUP54-211ENST00000512151 ZNF786Q8N393 782 aa7.92□□□□□ -1.14
NUP54-211ENST00000512151 METTL4Q8N3J2 472 aa7.92□□□□□ -1.14
NUP54-211ENST00000512151 OR9A2Q8NGT5 310 aa7.92□□□□□ -1.14
NUP54-211ENST00000512151 ZNF675Q8TD23 568 aa7.92□□□□□ -1.14
NUP54-211ENST00000512151 LRRC58Q96CX6 371 aa7.92□□□□□ -1.14
NUP54-211ENST00000512151 REXO5Q96IC2 774 aaKnown RBP7.92□□□□□ -1.14
NUP54-211ENST00000512151 EBF4Q9BQW3 602 aa7.92□□□□□ -1.14
NUP54-211ENST00000512151 MRPL1Q9BYD6 325 aaKnown RBP7.92□□□□□ -1.14
NUP54-211ENST00000512151 NARFLQ9H6Q4 476 aa7.92□□□□□ -1.14
NUP54-211ENST00000512151 WDR55Q9H6Y2 383 aaPredicted RBP7.92□□□□□ -1.14
NUP54-211ENST00000512151 FKRPQ9H9S5 495 aa7.92□□□□□ -1.14
NUP54-211ENST00000512151 BRF2Q9HAW0 419 aa7.92□□□□□ -1.14
NUP54-211ENST00000512151 G6PC2Q9NQR9 355 aa7.92□□□□□ -1.14
NUP54-211ENST00000512151 SLC12A4Q9UP95 1085 aa7.92□□□□□ -1.14
NUP54-211ENST00000512151 OR10H1Q9Y4A9 318 aa7.92□□□□□ -1.14
NUP54-211ENST00000512151 USH1CQ9Y6N9 552 aa7.92□□□□□ -1.14
NUP54-211ENST00000512151 A0A087WZY1 265 aa7.91□□□□□ -1.14
NUP54-211ENST00000512151 ANKRD65E5RJM6 399 aa7.91□□□□□ -1.14
NUP54-211ENST00000512151 NPIPB8E9PQR5 432 aa7.91□□□□□ -1.14
NUP54-211ENST00000512151 SLC28A1O00337 649 aa7.91□□□□□ -1.14
NUP54-211ENST00000512151 LSM1O15116 133 aaKnown RBP7.91□□□□□ -1.14
NUP54-211ENST00000512151 HDAC3O15379 428 aa7.91□□□□□ -1.14
NUP54-211ENST00000512151 RGS14O43566 566 aa7.91□□□□□ -1.14
NUP54-211ENST00000512151 UTS2O95399 124 aa7.91□□□□□ -1.14
NUP54-211ENST00000512151 IGKV1D-16P01601 117 aa7.91□□□□□ -1.14
NUP54-211ENST00000512151 HSD3B1P14060 373 aa7.91□□□□□ -1.14
NUP54-211ENST00000512151 MDKP21741 143 aaPredicted RBP7.91□□□□□ -1.14
NUP54-211ENST00000512151 PRPH2P23942 346 aa7.91□□□□□ -1.14
NUP54-211ENST00000512151 HSD3B2P26439 372 aa7.91□□□□□ -1.14
NUP54-211ENST00000512151 GCH1P30793 250 aa7.91□□□□□ -1.14
NUP54-211ENST00000512151 SERPINF1P36955 418 aa7.91□□□□□ -1.14
NUP54-211ENST00000512151 IDH3AP50213 366 aa7.91□□□□□ -1.14
NUP54-211ENST00000512151 PPOXP50336 477 aa7.91□□□□□ -1.14
NUP54-211ENST00000512151 ADIPOQQ15848 244 aa7.91□□□□□ -1.14
NUP54-211ENST00000512151 GABRA6Q16445 453 aa7.91□□□□□ -1.14
NUP54-211ENST00000512151 TUSC1Q2TAM9 212 aa7.91□□□□□ -1.14
NUP54-211ENST00000512151 EPGNQ6UW88 154 aa7.91□□□□□ -1.14
NUP54-211ENST00000512151 RHOUQ7L0Q8 258 aa7.91□□□□□ -1.14
NUP54-211ENST00000512151 C10orf67Q8IYJ2 551 aa7.91□□□□□ -1.14
NUP54-211ENST00000512151 CCDC116Q8IYX3 515 aa7.91□□□□□ -1.14
NUP54-211ENST00000512151 OR7G2Q8NG99 324 aa7.91□□□□□ -1.14
NUP54-211ENST00000512151 PUM2Q8TB72 1066 aaKnown RBP eCLIP7.91□□□□□ -1.14
NUP54-211ENST00000512151 RNF217Q8TC41 542 aa7.91□□□□□ -1.14
NUP54-211ENST00000512151 CPNE4Q96A23 557 aaPredicted RBP7.91□□□□□ -1.14
NUP54-211ENST00000512151 TM4SF18Q96CE8 201 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms