RNA–Protein interactions for RNA: ENST00000512027.1

DDX41-213, Transcript of DEAD-box helicase 41, humanhuman

TSL 4

Gene DDX41, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-213ENST00000512027 TMPPEQ6ZT21 453 aa14.67□□□□□ -0.06
DDX41-213ENST00000512027 NFKBIDQ8NI38 313 aa14.67□□□□□ -0.06
DDX41-213ENST00000512027 TMEM120AQ9BXJ8 343 aa14.67□□□□□ -0.06
DDX41-213ENST00000512027 A4GALTQ9NPC4 353 aa14.67□□□□□ -0.06
DDX41-213ENST00000512027 CCM2LQ9NUG4 571 aaPredicted RBP14.67□□□□□ -0.06
DDX41-213ENST00000512027 CALML5Q9NZT1 146 aa14.67□□□□□ -0.06
DDX41-213ENST00000512027 NIPSNAP3AQ9UFN0 247 aaPredicted RBP14.67□□□□□ -0.06
DDX41-213ENST00000512027 TMED7Q9Y3B3 224 aa14.67□□□□□ -0.06
DDX41-213ENST00000512027 ITPR3Q14573 2671 aa14.66□□□□□ -0.06
DDX41-213ENST00000512027 A0A0G2JPF8 293 aa14.66□□□□□ -0.06
DDX41-213ENST00000512027 A0A1W2PP18 115 aa14.66□□□□□ -0.06
DDX41-213ENST00000512027 ZC3H12DA2A288 527 aaKnown RBP14.66□□□□□ -0.06
DDX41-213ENST00000512027 DEFB108AA8MXU0 73 aa14.66□□□□□ -0.06
DDX41-213ENST00000512027 HNRNPCL2B2RXH8 293 aa14.66□□□□□ -0.06
DDX41-213ENST00000512027 ZNF814B7Z6K7 855 aa14.66□□□□□ -0.06
DDX41-213ENST00000512027 HNRNPCL3B7ZW38 293 aa14.66□□□□□ -0.06
DDX41-213ENST00000512027 CASKO14936 926 aa14.66□□□□□ -0.06
DDX41-213ENST00000512027 CYTIPO60759 359 aa14.66□□□□□ -0.06
DDX41-213ENST00000512027 HNRNPCL1O60812 293 aaKnown RBP14.66□□□□□ -0.06
DDX41-213ENST00000512027 RAMP1O60894 148 aa14.66□□□□□ -0.06
DDX41-213ENST00000512027 THBDP07204 575 aa14.66□□□□□ -0.06
DDX41-213ENST00000512027 HNRNPCL4P0DMR1 293 aa14.66□□□□□ -0.06
DDX41-213ENST00000512027 BMP2P12643 396 aa14.66□□□□□ -0.06
DDX41-213ENST00000512027 ACAA2P42765 397 aaKnown RBP14.66□□□□□ -0.06
DDX41-213ENST00000512027 HOXC5Q00444 222 aa14.66□□□□□ -0.06
DDX41-213ENST00000512027 RASGEF1BQ0VAM2 473 aa14.66□□□□□ -0.06
DDX41-213ENST00000512027 FADDQ13158 208 aa14.66□□□□□ -0.06
DDX41-213ENST00000512027 TESK1Q15569 626 aa14.66□□□□□ -0.06
DDX41-213ENST00000512027 GTF2IRD2BQ6EKJ0 949 aa14.66□□□□□ -0.06
DDX41-213ENST00000512027 SERPINA11Q86U17 422 aa14.66□□□□□ -0.06
DDX41-213ENST00000512027 GTF2IRD2Q86UP8 949 aa14.66□□□□□ -0.06
DDX41-213ENST00000512027 RETREG3Q86VR2 466 aa14.66□□□□□ -0.06
DDX41-213ENST00000512027 CADM2Q8N3J6 435 aa14.66□□□□□ -0.06
DDX41-213ENST00000512027 SLC25A43Q8WUT9 341 aaPredicted RBP14.66□□□□□ -0.06
DDX41-213ENST00000512027 PMM1Q92871 262 aa14.66□□□□□ -0.06
DDX41-213ENST00000512027 PIK3IP1Q96FE7 263 aa14.66□□□□□ -0.06
DDX41-213ENST00000512027 RAD21L1Q9H4I0 556 aa14.66□□□□□ -0.06
DDX41-213ENST00000512027 FGFR1OP2Q9NVK5 253 aa14.66□□□□□ -0.06
DDX41-213ENST00000512027 ST6GALNAC2Q9UJ37 374 aa14.66□□□□□ -0.06
DDX41-213ENST00000512027 SPIN1Q9Y657 262 aaPredicted RBP14.66□□□□□ -0.06
DDX41-213ENST00000512027 TMEM247A6NEH6 219 aa14.65□□□□□ -0.06
DDX41-213ENST00000512027 PGM3O95394 542 aa14.65□□□□□ -0.06
DDX41-213ENST00000512027 YES1P07947 543 aa14.65□□□□□ -0.06
DDX41-213ENST00000512027 ARAFP10398 606 aa14.65□□□□□ -0.06
DDX41-213ENST00000512027 IMPDH2P12268 514 aa14.65□□□□□ -0.06
DDX41-213ENST00000512027 SLC1A3P43003 542 aa14.65□□□□□ -0.06
DDX41-213ENST00000512027 POLR2HP52434 150 aaKnown RBP14.65□□□□□ -0.06
DDX41-213ENST00000512027 ART1P52961 327 aa14.65□□□□□ -0.06
DDX41-213ENST00000512027 BNIP2Q12982 314 aa14.65□□□□□ -0.06
DDX41-213ENST00000512027 SELPLGQ14242 412 aa14.65□□□□□ -0.06
DDX41-213ENST00000512027 ZNF311Q5JNZ3 666 aa14.65□□□□□ -0.06
DDX41-213ENST00000512027 GCNT6Q5T4J0 391 aa14.65□□□□□ -0.06
DDX41-213ENST00000512027 RNF220Q5VTB9 566 aa14.65□□□□□ -0.06
DDX41-213ENST00000512027 ABLIM2Q6H8Q1 611 aa14.65□□□□□ -0.06
DDX41-213ENST00000512027 DLEU7Q6UYE1 221 aa14.65□□□□□ -0.06
DDX41-213ENST00000512027 DHDDSQ86SQ9 333 aa14.65□□□□□ -0.06
DDX41-213ENST00000512027 COMTD1Q86VU5 262 aa14.65□□□□□ -0.06
DDX41-213ENST00000512027 CXorf67Q86X51 503 aaPredicted RBP14.65□□□□□ -0.06
DDX41-213ENST00000512027 SLC43A2Q8N370 569 aa14.65□□□□□ -0.06
DDX41-213ENST00000512027 BBS10Q8TAM1 723 aa14.65□□□□□ -0.06
DDX41-213ENST00000512027 STON2Q8WXE9 905 aa14.65□□□□□ -0.06
DDX41-213ENST00000512027 HS3ST6Q96QI5 342 aa14.65□□□□□ -0.06
DDX41-213ENST00000512027 CPPED1Q9BRF8 314 aaPredicted RBP14.65□□□□□ -0.06
DDX41-213ENST00000512027 SPATA9Q9BWV2 254 aa14.65□□□□□ -0.06
DDX41-213ENST00000512027 PLEKHF2Q9H8W4 249 aa14.65□□□□□ -0.06
DDX41-213ENST00000512027 THUMPD1Q9NXG2 353 aaKnown RBP14.65□□□□□ -0.06
DDX41-213ENST00000512027 KLHL9Q9P2J3 617 aa14.65□□□□□ -0.06
DDX41-213ENST00000512027 PRSS50Q9UI38 385 aa14.65□□□□□ -0.06
DDX41-213ENST00000512027 VPS13CQ709C8 3753 aa14.64□□□□□ -0.07
DDX41-213ENST00000512027 C5orf58C9J3I9 102 aa14.64□□□□□ -0.07
DDX41-213ENST00000512027 FAAHO00519 579 aa14.64□□□□□ -0.07
DDX41-213ENST00000512027 GCM2O75603 506 aaPredicted RBP14.64□□□□□ -0.07
DDX41-213ENST00000512027 THBS1P07996 1170 aa14.64□□□□□ -0.07
DDX41-213ENST00000512027 CRYGSP22914 178 aa14.64□□□□□ -0.07
DDX41-213ENST00000512027 PCYT1AP49585 367 aa14.64□□□□□ -0.07
DDX41-213ENST00000512027 OR2B6P58173 313 aa14.64□□□□□ -0.07
DDX41-213ENST00000512027 CSNK2A1P68400 391 aaPredicted RBP14.64□□□□□ -0.07
DDX41-213ENST00000512027 GUCY1A3Q02108 690 aa14.64□□□□□ -0.07
DDX41-213ENST00000512027 LARS2Q15031 903 aaKnown RBP14.64□□□□□ -0.07
DDX41-213ENST00000512027 ALKBH2Q6NS38 261 aa14.64□□□□□ -0.07
DDX41-213ENST00000512027 BEND4Q6ZU67 534 aa14.64□□□□□ -0.07
DDX41-213ENST00000512027 STK32CQ86UX6 486 aa14.64□□□□□ -0.07
DDX41-213ENST00000512027 CCDC103Q8IW40 242 aa14.64□□□□□ -0.07
DDX41-213ENST00000512027 ACTR6Q9GZN1 396 aa14.64□□□□□ -0.07
DDX41-213ENST00000512027 BCO1Q9HAY6 547 aa14.64□□□□□ -0.07
DDX41-213ENST00000512027 BCL2L10Q9HD36 194 aa14.64□□□□□ -0.07
DDX41-213ENST00000512027 LEF1Q9UJU2 399 aaPredicted RBP14.64□□□□□ -0.07
DDX41-213ENST00000512027 ZNF716A6NP11 495 aa14.63□□□□□ -0.07
DDX41-213ENST00000512027 PMS2P2O95744 297 aa14.63□□□□□ -0.07
DDX41-213ENST00000512027 UQCRBP14927 111 aa14.63□□□□□ -0.07
DDX41-213ENST00000512027 AQP1P29972 269 aa14.63□□□□□ -0.07
DDX41-213ENST00000512027 HTR3AP46098 478 aa14.63□□□□□ -0.07
DDX41-213ENST00000512027 MTPNP58546 118 aa14.63□□□□□ -0.07
DDX41-213ENST00000512027 CDK6Q00534 326 aa14.63□□□□□ -0.07
DDX41-213ENST00000512027 GLIPR1L2Q4G1C9 344 aa14.63□□□□□ -0.07
DDX41-213ENST00000512027 RUNDC3AQ59EK9 446 aa14.63□□□□□ -0.07
DDX41-213ENST00000512027 PAMR1Q6UXH9 720 aa14.63□□□□□ -0.07
DDX41-213ENST00000512027 MTDHQ86UE4 582 aaKnown RBP14.63□□□□□ -0.07
DDX41-213ENST00000512027 WFDC8Q8IUA0 241 aa14.63□□□□□ -0.07
DDX41-213ENST00000512027 ZNF440Q8IYI8 595 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms