RNA–Protein interactions for RNA: ENST00000511586.5

PDLIM5-215, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4

Gene PDLIM5, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-215ENST00000511586 LRRC46Q96FV0 321 aa6.42□□□□□ -1.38
PDLIM5-215ENST00000511586 ZNF845Q96IR2 970 aaPredicted RBP6.42□□□□□ -1.38
PDLIM5-215ENST00000511586 HOPXQ9BPY8 73 aaPredicted RBP6.42□□□□□ -1.38
PDLIM5-215ENST00000511586 SFXN3Q9BWM7 321 aa6.42□□□□□ -1.38
PDLIM5-215ENST00000511586 CADM1Q9BY67 442 aaKnown RBP6.42□□□□□ -1.38
PDLIM5-215ENST00000511586 MMADHCQ9H3L0 296 aaPredicted RBP6.42□□□□□ -1.38
PDLIM5-215ENST00000511586 PIF1Q9H611 641 aa6.42□□□□□ -1.38
PDLIM5-215ENST00000511586 EVA1AQ9H8M9 152 aa6.42□□□□□ -1.38
PDLIM5-215ENST00000511586 RNF122Q9H9V4 155 aa6.42□□□□□ -1.38
PDLIM5-215ENST00000511586 CTPS2Q9NRF8 586 aa6.42□□□□□ -1.38
PDLIM5-215ENST00000511586 NDE1Q9NXR1 346 aa6.42□□□□□ -1.38
PDLIM5-215ENST00000511586 KLHL28Q9NXS3 571 aa6.42□□□□□ -1.38
PDLIM5-215ENST00000511586 CHRNA9Q9UGM1 479 aa6.42□□□□□ -1.38
PDLIM5-215ENST00000511586 SLC13A4Q9UKG4 626 aa6.42□□□□□ -1.38
PDLIM5-215ENST00000511586 CHST2Q9Y4C5 530 aa6.42□□□□□ -1.38
PDLIM5-215ENST00000511586 SPIN1Q9Y657 262 aaPredicted RBP6.42□□□□□ -1.38
PDLIM5-215ENST00000511586 MED12Q93074 2177 aa6.42□□□□□ -1.38
PDLIM5-215ENST00000511586 DOPEY2Q9Y3R5 2298 aa6.42□□□□□ -1.38
PDLIM5-215ENST00000511586 PHF3Q92576 2039 aaKnown RBP6.42□□□□□ -1.38
PDLIM5-215ENST00000511586 NCOA6Q14686 2063 aaPredicted RBP6.41□□□□□ -1.38
PDLIM5-215ENST00000511586 DOPEY1Q5JWR5 2465 aa6.41□□□□□ -1.38
PDLIM5-215ENST00000511586 LRRK2Q5S007 2527 aa6.41□□□□□ -1.38
PDLIM5-215ENST00000511586 TMED7-TICAM2A0A0A6YYA0 188 aa6.41□□□□□ -1.38
PDLIM5-215ENST00000511586 A0A1W2PNR3 127 aa6.41□□□□□ -1.38
PDLIM5-215ENST00000511586 TPST1O60507 370 aa6.41□□□□□ -1.38
PDLIM5-215ENST00000511586 GCM2O75603 506 aaPredicted RBP6.41□□□□□ -1.38
PDLIM5-215ENST00000511586 AQP8O94778 261 aa6.41□□□□□ -1.38
PDLIM5-215ENST00000511586 PLGP00747 810 aaPredicted RBP6.41□□□□□ -1.38
PDLIM5-215ENST00000511586 C8BP07358 591 aa6.41□□□□□ -1.38
PDLIM5-215ENST00000511586 PRG2P13727 222 aa6.41□□□□□ -1.38
PDLIM5-215ENST00000511586 CCNA2P20248 432 aa6.41□□□□□ -1.38
PDLIM5-215ENST00000511586 TACR3P29371 465 aa6.41□□□□□ -1.38
PDLIM5-215ENST00000511586 RAC3P60763 192 aa6.41□□□□□ -1.38
PDLIM5-215ENST00000511586 FOXF2Q12947 444 aa6.41□□□□□ -1.38
PDLIM5-215ENST00000511586 VEZF1Q14119 521 aa6.41□□□□□ -1.38
PDLIM5-215ENST00000511586 SNCBQ16143 134 aa6.41□□□□□ -1.38
PDLIM5-215ENST00000511586 SYT14P1Q58G82 188 aa6.41□□□□□ -1.38
PDLIM5-215ENST00000511586 WBP2NLQ6ICG8 309 aa6.41□□□□□ -1.38
PDLIM5-215ENST00000511586 PPP4R4Q6NUP7 873 aa6.41□□□□□ -1.38
PDLIM5-215ENST00000511586 C16orf89Q6UX73 402 aa6.41□□□□□ -1.38
PDLIM5-215ENST00000511586 HACD2Q6Y1H2 254 aa6.41□□□□□ -1.38
PDLIM5-215ENST00000511586 CCDC80Q76M96 950 aa6.41□□□□□ -1.38
PDLIM5-215ENST00000511586 PATL1Q86TB9 770 aaKnown RBP6.41□□□□□ -1.38
PDLIM5-215ENST00000511586 MCEMP1Q8IX19 187 aa6.41□□□□□ -1.38
PDLIM5-215ENST00000511586 SLC15A3Q8IY34 581 aa6.41□□□□□ -1.38
PDLIM5-215ENST00000511586 CADM2Q8N3J6 435 aa6.41□□□□□ -1.38
PDLIM5-215ENST00000511586 RELL2Q8NC24 303 aaPredicted RBP6.41□□□□□ -1.38
PDLIM5-215ENST00000511586 SLC26A7Q8TE54 656 aa6.41□□□□□ -1.38
PDLIM5-215ENST00000511586 RASSF5Q8WWW0 418 aa6.41□□□□□ -1.38
PDLIM5-215ENST00000511586 DDIT4LQ96D03 193 aa6.41□□□□□ -1.38
PDLIM5-215ENST00000511586 REXO5Q96IC2 774 aaKnown RBP6.41□□□□□ -1.38
PDLIM5-215ENST00000511586 ZNF583Q96ND8 569 aa6.41□□□□□ -1.38
PDLIM5-215ENST00000511586 OR5B2Q96R09 309 aa6.41□□□□□ -1.38
PDLIM5-215ENST00000511586 GPATCH1Q9BRR8 931 aaKnown RBP6.41□□□□□ -1.38
PDLIM5-215ENST00000511586 THTPAQ9BU02 230 aa6.41□□□□□ -1.38
PDLIM5-215ENST00000511586 ADAM19Q9H013 955 aa6.41□□□□□ -1.38
PDLIM5-215ENST00000511586 C1orf21Q9H246 121 aa6.41□□□□□ -1.38
PDLIM5-215ENST00000511586 PIGMQ9H3S5 423 aa6.41□□□□□ -1.38
PDLIM5-215ENST00000511586 GLRX2Q9NS18 164 aa6.41□□□□□ -1.38
PDLIM5-215ENST00000511586 TAS2R1Q9NYW7 299 aa6.41□□□□□ -1.38
PDLIM5-215ENST00000511586 OSGIN1Q9UJX0 560 aa6.41□□□□□ -1.38
PDLIM5-215ENST00000511586 TMED7Q9Y3B3 224 aa6.41□□□□□ -1.38
PDLIM5-215ENST00000511586 HDGFL3Q9Y3E1 203 aa6.41□□□□□ -1.38
PDLIM5-215ENST00000511586 COL12A1Q99715 3063 aa6.4□□□□□ -1.38
PDLIM5-215ENST00000511586 ICE1Q9Y2F5 2266 aa6.4□□□□□ -1.38
PDLIM5-215ENST00000511586 A0A1W2PNV4 684 aa6.4□□□□□ -1.38
PDLIM5-215ENST00000511586 ELOVL7A1L3X0 281 aa6.4□□□□□ -1.38
PDLIM5-215ENST00000511586 FAM220BPB1ANY3 271 aa6.4□□□□□ -1.38
PDLIM5-215ENST00000511586 EEF1E1-BLOC1S5C9J1V9 151 aa6.4□□□□□ -1.38
PDLIM5-215ENST00000511586 C19orf84I3L1E1 186 aa6.4□□□□□ -1.38
PDLIM5-215ENST00000511586 SULT2B1O00204 365 aa6.4□□□□□ -1.38
PDLIM5-215ENST00000511586 SYT5O00445 386 aa6.4□□□□□ -1.38
PDLIM5-215ENST00000511586 GSC2O15499 205 aa6.4□□□□□ -1.38
PDLIM5-215ENST00000511586 EEF1E1O43324 174 aaKnown RBP6.4□□□□□ -1.38
PDLIM5-215ENST00000511586 ZNF208O43345 1280 aa6.4□□□□□ -1.38
PDLIM5-215ENST00000511586 HNRNPRO43390 633 aaKnown RBP6.4□□□□□ -1.38
PDLIM5-215ENST00000511586 FRS3O43559 492 aa6.4□□□□□ -1.38
PDLIM5-215ENST00000511586 TNFSF13O75888 250 aa6.4□□□□□ -1.38
PDLIM5-215ENST00000511586 ATP6V1G2O95670 118 aa6.4□□□□□ -1.38
PDLIM5-215ENST00000511586 PMS2P2O95744 297 aa6.4□□□□□ -1.38
PDLIM5-215ENST00000511586 LGI1O95970 557 aa6.4□□□□□ -1.38
PDLIM5-215ENST00000511586 IFNA14P01570 189 aa6.4□□□□□ -1.38
PDLIM5-215ENST00000511586 OPN1SWP03999 348 aa6.4□□□□□ -1.38
PDLIM5-215ENST00000511586 COX6B1P14854 86 aa6.4□□□□□ -1.38
PDLIM5-215ENST00000511586 ENPP1P22413 925 aa6.4□□□□□ -1.38
PDLIM5-215ENST00000511586 CXCR1P25024 350 aa6.4□□□□□ -1.38
PDLIM5-215ENST00000511586 CPOXP36551 454 aa6.4□□□□□ -1.38
PDLIM5-215ENST00000511586 KIR2DL2P43627 348 aaPredicted RBP6.4□□□□□ -1.38
PDLIM5-215ENST00000511586 KCNJ5P48544 419 aa6.4□□□□□ -1.38
PDLIM5-215ENST00000511586 DIO1P49895 249 aa6.4□□□□□ -1.38
PDLIM5-215ENST00000511586 ASCL1P50553 236 aa6.4□□□□□ -1.38
PDLIM5-215ENST00000511586 CTBP2P56545 445 aa6.4□□□□□ -1.38
PDLIM5-215ENST00000511586 RGS8P57771 180 aaPredicted RBP6.4□□□□□ -1.38
PDLIM5-215ENST00000511586 CSNK2A1P68400 391 aaPredicted RBP6.4□□□□□ -1.38
PDLIM5-215ENST00000511586 SLC25A3Q00325 362 aa6.4□□□□□ -1.38
PDLIM5-215ENST00000511586 HOXC5Q00444 222 aa6.4□□□□□ -1.38
PDLIM5-215ENST00000511586 LIPEQ05469 1076 aa6.4□□□□□ -1.38
PDLIM5-215ENST00000511586 TFF3Q07654 80 aa6.4□□□□□ -1.38
PDLIM5-215ENST00000511586 MYBPHQ13203 477 aa6.4□□□□□ -1.38
PDLIM5-215ENST00000511586 RNPS1Q15287 305 aaKnown RBP6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms