RNA–Protein interactions for RNA: ENST00000511316.1

HMGB2-205, Transcript of high mobility group box 2, humanhuman

TSL 2

Gene HMGB2, Length 1,841 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB2-205ENST00000511316 AMIGO1Q86WK6 493 aa11.88□□□□□ -0.51
HMGB2-205ENST00000511316 SPERTQ8NA61 448 aa11.88□□□□□ -0.51
HMGB2-205ENST00000511316 SPRYD4Q8WW59 207 aaPredicted RBP11.88□□□□□ -0.51
HMGB2-205ENST00000511316 PHF21AQ96BD5 680 aa11.88□□□□□ -0.51
HMGB2-205ENST00000511316 CITED4Q96RK1 184 aa11.88□□□□□ -0.51
HMGB2-205ENST00000511316 WACQ9BTA9 647 aa11.88□□□□□ -0.51
HMGB2-205ENST00000511316 HDHD5Q9BXW7 423 aa11.88□□□□□ -0.51
HMGB2-205ENST00000511316 PLA2G12AQ9BZM1 189 aa11.88□□□□□ -0.51
HMGB2-205ENST00000511316 RNF32Q9H0A6 362 aa11.88□□□□□ -0.51
HMGB2-205ENST00000511316 ENAMQ9NRM1 1142 aa11.88□□□□□ -0.51
HMGB2-205ENST00000511316 TRAV1-2A0A0B4J238 106 aa11.87□□□□□ -0.51
HMGB2-205ENST00000511316 NAP1L6A6NFF2 107 aa11.87□□□□□ -0.51
HMGB2-205ENST00000511316 J3QRE1 110 aa11.87□□□□□ -0.51
HMGB2-205ENST00000511316 PLPP2O43688 288 aa11.87□□□□□ -0.51
HMGB2-205ENST00000511316 TMPRSS11DO60235 418 aa11.87□□□□□ -0.51
HMGB2-205ENST00000511316 B4GALT2O60909 372 aa11.87□□□□□ -0.51
HMGB2-205ENST00000511316 TPPPO94811 219 aa11.87□□□□□ -0.51
HMGB2-205ENST00000511316 SOX30O94993 753 aa11.87□□□□□ -0.51
HMGB2-205ENST00000511316 RCBTB2O95199 551 aa11.87□□□□□ -0.51
HMGB2-205ENST00000511316 CD1AP06126 327 aa11.87□□□□□ -0.51
HMGB2-205ENST00000511316 CHRM4P08173 479 aa11.87□□□□□ -0.51
HMGB2-205ENST00000511316 ELK1P19419 428 aa11.87□□□□□ -0.51
HMGB2-205ENST00000511316 SSTR4P31391 388 aa11.87□□□□□ -0.51
HMGB2-205ENST00000511316 MMP15P51511 669 aa11.87□□□□□ -0.51
HMGB2-205ENST00000511316 RGS8P57771 180 aaPredicted RBP11.87□□□□□ -0.51
HMGB2-205ENST00000511316 AP3S2P59780 193 aa11.87□□□□□ -0.51
HMGB2-205ENST00000511316 ZFP36L1Q07352 338 aaKnown RBP11.87□□□□□ -0.51
HMGB2-205ENST00000511316 RGS1Q08116 209 aa11.87□□□□□ -0.51
HMGB2-205ENST00000511316 GALEQ14376 348 aa11.87□□□□□ -0.51
HMGB2-205ENST00000511316 CEBPEQ15744 281 aa11.87□□□□□ -0.51
HMGB2-205ENST00000511316 NTRK2Q16620 822 aa11.87□□□□□ -0.51
HMGB2-205ENST00000511316 FAM69AQ5T7M9 428 aa11.87□□□□□ -0.51
HMGB2-205ENST00000511316 LAMTOR1Q6IAA8 161 aa11.87□□□□□ -0.51
HMGB2-205ENST00000511316 SMARCD3Q6STE5 483 aa11.87□□□□□ -0.51
HMGB2-205ENST00000511316 TEX261Q6UWH6 196 aa11.87□□□□□ -0.51
HMGB2-205ENST00000511316 MEPCEQ7L2J0 689 aaKnown RBP11.87□□□□□ -0.51
HMGB2-205ENST00000511316 LHFPL3Q86UP9 236 aa11.87□□□□□ -0.51
HMGB2-205ENST00000511316 RANBP3LQ86VV4 465 aaPredicted RBP11.87□□□□□ -0.51
HMGB2-205ENST00000511316 CMIPQ8IY22 773 aa11.87□□□□□ -0.51
HMGB2-205ENST00000511316 ANKRD53Q8N9V6 530 aa11.87□□□□□ -0.51
HMGB2-205ENST00000511316 OR6C4Q8NGE1 309 aa11.87□□□□□ -0.51
HMGB2-205ENST00000511316 OR8H1Q8NGG4 311 aa11.87□□□□□ -0.51
HMGB2-205ENST00000511316 CNTNAP3BQ96NU0 1288 aa11.87□□□□□ -0.51
HMGB2-205ENST00000511316 DPH7Q9BTV6 452 aa11.87□□□□□ -0.51
HMGB2-205ENST00000511316 CNTNAP3Q9BZ76 1288 aa11.87□□□□□ -0.51
HMGB2-205ENST00000511316 RERGLQ9H628 205 aa11.87□□□□□ -0.51
HMGB2-205ENST00000511316 EGLN3Q9H6Z9 239 aa11.87□□□□□ -0.51
HMGB2-205ENST00000511316 EIF3KQ9UBQ5 218 aaKnown RBP11.87□□□□□ -0.51
HMGB2-205ENST00000511316 YARS2Q9Y2Z4 477 aaKnown RBP11.87□□□□□ -0.51
HMGB2-205ENST00000511316 U3KQ87 197 aa11.87□□□□□ -0.51
HMGB2-205ENST00000511316 USP24Q9UPU5 2620 aa11.87□□□□□ -0.51
HMGB2-205ENST00000511316 A0A0G2JMP0 313 aa11.86□□□□□ -0.51
HMGB2-205ENST00000511316 LOC102723532A0A0G2JNH3 316 aa11.86□□□□□ -0.51
HMGB2-205ENST00000511316 TRABD2BA6NFA1 517 aa11.86□□□□□ -0.51
HMGB2-205ENST00000511316 OR52A4PA6NMU1 304 aa11.86□□□□□ -0.51
HMGB2-205ENST00000511316 BTN3A3O00478 584 aa11.86□□□□□ -0.51
HMGB2-205ENST00000511316 GSTZ1O43708 216 aaPredicted RBP11.86□□□□□ -0.51
HMGB2-205ENST00000511316 OR1F1O43749 312 aa11.86□□□□□ -0.51
HMGB2-205ENST00000511316 FMO6PO60774 539 aa11.86□□□□□ -0.51
HMGB2-205ENST00000511316 ARL6IP5O75915 188 aa11.86□□□□□ -0.51
HMGB2-205ENST00000511316 TBX6O95947 436 aaPredicted RBP11.86□□□□□ -0.51
HMGB2-205ENST00000511316 RAF1P04049 648 aa11.86□□□□□ -0.51
HMGB2-205ENST00000511316 THBS1P07996 1170 aa11.86□□□□□ -0.51
HMGB2-205ENST00000511316 SLC35G4P0C7Q5 338 aa11.86□□□□□ -0.51
HMGB2-205ENST00000511316 BMP7P18075 431 aa11.86□□□□□ -0.51
HMGB2-205ENST00000511316 OR1D5P58170 312 aa11.86□□□□□ -0.51
HMGB2-205ENST00000511316 ISXQ2M1V0 245 aa11.86□□□□□ -0.51
HMGB2-205ENST00000511316 CLLU1Q5K131 121 aa11.86□□□□□ -0.51
HMGB2-205ENST00000511316 IDNKQ5T6J7 187 aa11.86□□□□□ -0.51
HMGB2-205ENST00000511316 C16orf62Q7Z3J2 963 aa11.86□□□□□ -0.51
HMGB2-205ENST00000511316 WDR53Q7Z5U6 358 aaPredicted RBP11.86□□□□□ -0.51
HMGB2-205ENST00000511316 CDK20Q8IZL9 346 aa11.86□□□□□ -0.51
HMGB2-205ENST00000511316 OR8D4Q8NGM9 314 aa11.86□□□□□ -0.51
HMGB2-205ENST00000511316 ZNF649Q9BS31 505 aa11.86□□□□□ -0.51
HMGB2-205ENST00000511316 SARGQ9BW04 601 aa11.86□□□□□ -0.51
HMGB2-205ENST00000511316 SORBS1Q9BX66 1292 aaKnown RBP11.86□□□□□ -0.51
HMGB2-205ENST00000511316 ACTRT3Q9BYD9 372 aa11.86□□□□□ -0.51
HMGB2-205ENST00000511316 OR51J1Q9H342 316 aa11.86□□□□□ -0.51
HMGB2-205ENST00000511316 GHITMQ9H3K2 345 aa11.86□□□□□ -0.51
HMGB2-205ENST00000511316 LRRN3Q9H3W5 708 aa11.86□□□□□ -0.51
HMGB2-205ENST00000511316 MTHFD2LQ9H903 347 aaPredicted RBP11.86□□□□□ -0.51
HMGB2-205ENST00000511316 C12orf10Q9HB07 376 aa11.86□□□□□ -0.51
HMGB2-205ENST00000511316 IMP3Q9NV31 184 aaKnown RBP11.86□□□□□ -0.51
HMGB2-205ENST00000511316 C14orf105Q9NVL8 296 aa11.86□□□□□ -0.51
HMGB2-205ENST00000511316 SCP2D1Q9UJQ7 156 aa11.86□□□□□ -0.51
HMGB2-205ENST00000511316 ENTPD2Q9Y5L3 495 aa11.86□□□□□ -0.51
HMGB2-205ENST00000511316 APC2O95996 2303 aa11.86□□□□□ -0.51
HMGB2-205ENST00000511316 KIF26BQ2KJY2 2108 aa11.86□□□□□ -0.51
HMGB2-205ENST00000511316 PRAMEF27A3QJZ7 478 aa11.86□□□□□ -0.51
HMGB2-205ENST00000511316 LEUTXA8MZ59 168 aa11.86□□□□□ -0.51
HMGB2-205ENST00000511316 ZNF749O43361 778 aa11.86□□□□□ -0.51
HMGB2-205ENST00000511316 ECDO95905 644 aaPredicted RBP11.86□□□□□ -0.51
HMGB2-205ENST00000511316 HMGN2P05204 90 aaKnown RBP11.86□□□□□ -0.51
HMGB2-205ENST00000511316 IFI6P09912 130 aa11.86□□□□□ -0.51
HMGB2-205ENST00000511316 HOXB3P14651 431 aaPredicted RBP11.86□□□□□ -0.51
HMGB2-205ENST00000511316 GPR3P46089 330 aa11.86□□□□□ -0.51
HMGB2-205ENST00000511316 MRPS10P82664 201 aaKnown RBP11.86□□□□□ -0.51
HMGB2-205ENST00000511316 PRDX1Q06830 199 aaKnown RBP11.86□□□□□ -0.51
HMGB2-205ENST00000511316 SFXN4Q6P4A7 337 aa11.86□□□□□ -0.51
HMGB2-205ENST00000511316 TMEM91Q6ZNR0 172 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms