RNA–Protein interactions for RNA: ENST00000509409.5

TPM3-219, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 1,248 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-219ENST00000509409 UFM1P61960 85 aa13.6□□□□□ -0.23
TPM3-219ENST00000509409 PDK3Q15120 406 aa13.6□□□□□ -0.23
TPM3-219ENST00000509409 TIMM23BQ5SRD1 257 aa13.6□□□□□ -0.23
TPM3-219ENST00000509409 PRR14LQ5THK1 2151 aa13.6□□□□□ -0.23
TPM3-219ENST00000509409 HHATQ5VTY9 493 aa13.6□□□□□ -0.23
TPM3-219ENST00000509409 GRINAQ7Z429 371 aa13.6□□□□□ -0.23
TPM3-219ENST00000509409 P2RY8Q86VZ1 359 aa13.6□□□□□ -0.23
TPM3-219ENST00000509409 RNF130Q86XS8 419 aa13.6□□□□□ -0.23
TPM3-219ENST00000509409 ADGRG3Q86Y34 549 aa13.6□□□□□ -0.23
TPM3-219ENST00000509409 ZNF433Q8N7K0 673 aaPredicted RBP13.6□□□□□ -0.23
TPM3-219ENST00000509409 ANKRD42Q8N9B4 389 aa13.6□□□□□ -0.23
TPM3-219ENST00000509409 PIGXQ8TBF5 258 aa13.6□□□□□ -0.23
TPM3-219ENST00000509409 APH1AQ96BI3 265 aa13.6□□□□□ -0.23
TPM3-219ENST00000509409 PANX1Q96RD7 426 aa13.6□□□□□ -0.23
TPM3-219ENST00000509409 ZBTB18Q99592 522 aa13.6□□□□□ -0.23
TPM3-219ENST00000509409 MEAF6Q9HAF1 191 aa13.6□□□□□ -0.23
TPM3-219ENST00000509409 BTNL2Q9UIR0 455 aa13.6□□□□□ -0.23
TPM3-219ENST00000509409 RNF223E7ERA6 249 aa13.59□□□□□ -0.23
TPM3-219ENST00000509409 OVOL3O00110 214 aa13.59□□□□□ -0.23
TPM3-219ENST00000509409 HMGN4O00479 90 aa13.59□□□□□ -0.23
TPM3-219ENST00000509409 GPR171O14626 319 aa13.59□□□□□ -0.23
TPM3-219ENST00000509409 RAMP1O60894 148 aa13.59□□□□□ -0.23
TPM3-219ENST00000509409 MRPL33O75394 65 aaKnown RBP13.59□□□□□ -0.23
TPM3-219ENST00000509409 RAD51DO75771 328 aa13.59□□□□□ -0.23
TPM3-219ENST00000509409 PMS2P2O95744 297 aa13.59□□□□□ -0.23
TPM3-219ENST00000509409 DHRS4L1P0CG22 281 aa13.59□□□□□ -0.23
TPM3-219ENST00000509409 NR2F1P10589 423 aa13.59□□□□□ -0.23
TPM3-219ENST00000509409 MAGEA8P43361 318 aa13.59□□□□□ -0.23
TPM3-219ENST00000509409 HTR3AP46098 478 aa13.59□□□□□ -0.23
TPM3-219ENST00000509409 CLK1P49759 484 aaKnown RBP13.59□□□□□ -0.23
TPM3-219ENST00000509409 CDH11P55287 796 aa13.59□□□□□ -0.23
TPM3-219ENST00000509409 FUT5Q11128 374 aa13.59□□□□□ -0.23
TPM3-219ENST00000509409 MPP2Q14168 576 aa13.59□□□□□ -0.23
TPM3-219ENST00000509409 GNA13Q14344 377 aa13.59□□□□□ -0.23
TPM3-219ENST00000509409 SYPL1Q16563 259 aa13.59□□□□□ -0.23
TPM3-219ENST00000509409 FBXW9Q5XUX1 488 aa13.59□□□□□ -0.23
TPM3-219ENST00000509409 SSX8Q7RTT4 187 aa13.59□□□□□ -0.23
TPM3-219ENST00000509409 SPATA19Q7Z5L4 167 aa13.59□□□□□ -0.23
TPM3-219ENST00000509409 CCDC103Q8IW40 242 aa13.59□□□□□ -0.23
TPM3-219ENST00000509409 LRRC34Q8IZ02 419 aa13.59□□□□□ -0.23
TPM3-219ENST00000509409 ANKFN1Q8N957 763 aa13.59□□□□□ -0.23
TPM3-219ENST00000509409 MAPK1IP1LQ8NDC0 245 aa13.59□□□□□ -0.23
TPM3-219ENST00000509409 FAM71CQ8NEG0 241 aa13.59□□□□□ -0.23
TPM3-219ENST00000509409 CNOT9Q92600 299 aaKnown RBP13.59□□□□□ -0.23
TPM3-219ENST00000509409 ARL5BQ96KC2 179 aa13.59□□□□□ -0.23
TPM3-219ENST00000509409 TEX37Q96LM6 180 aa13.59□□□□□ -0.23
TPM3-219ENST00000509409 CCDC115Q96NT0 180 aa13.59□□□□□ -0.23
TPM3-219ENST00000509409 TRNT1Q96Q11 434 aaKnown RBP13.59□□□□□ -0.23
TPM3-219ENST00000509409 OR52E6Q96RD3 313 aa13.59□□□□□ -0.23
TPM3-219ENST00000509409 NAA11Q9BSU3 229 aaPredicted RBP13.59□□□□□ -0.23
TPM3-219ENST00000509409 TRIM2Q9C040 744 aa13.59□□□□□ -0.23
TPM3-219ENST00000509409 OR11A1Q9GZK7 315 aa13.59□□□□□ -0.23
TPM3-219ENST00000509409 EXOSC3Q9NQT5 275 aaKnown RBP13.59□□□□□ -0.23
TPM3-219ENST00000509409 FAIMQ9NVQ4 179 aa13.59□□□□□ -0.23
TPM3-219ENST00000509409 IGKV3D-15A0A087WSY6 115 aa13.58□□□□□ -0.24
TPM3-219ENST00000509409 TMED7-TICAM2A0A0A6YYA0 188 aa13.58□□□□□ -0.24
TPM3-219ENST00000509409 PRAMEF27A3QJZ7 478 aa13.58□□□□□ -0.24
TPM3-219ENST00000509409 OR5H1A6NKK0 313 aa13.58□□□□□ -0.24
TPM3-219ENST00000509409 ABCD4O14678 606 aa13.58□□□□□ -0.24
TPM3-219ENST00000509409 C1QCP02747 245 aa13.58□□□□□ -0.24
TPM3-219ENST00000509409 GSNP06396 782 aa13.58□□□□□ -0.24
TPM3-219ENST00000509409 IL7RP16871 459 aa13.58□□□□□ -0.24
TPM3-219ENST00000509409 BST1Q10588 318 aa13.58□□□□□ -0.24
TPM3-219ENST00000509409 ETFDHQ16134 617 aa13.58□□□□□ -0.24
TPM3-219ENST00000509409 PGGHGQ32M88 737 aa13.58□□□□□ -0.24
TPM3-219ENST00000509409 NXNQ6DKJ4 435 aa13.58□□□□□ -0.24
TPM3-219ENST00000509409 ABLIM2Q6H8Q1 611 aa13.58□□□□□ -0.24
TPM3-219ENST00000509409 OR52N5Q8NH56 324 aa13.58□□□□□ -0.24
TPM3-219ENST00000509409 PMM1Q92871 262 aa13.58□□□□□ -0.24
TPM3-219ENST00000509409 DDIT4LQ96D03 193 aa13.58□□□□□ -0.24
TPM3-219ENST00000509409 HS6ST2Q96MM7 605 aa13.58□□□□□ -0.24
TPM3-219ENST00000509409 INPP5KQ9BT40 448 aa13.58□□□□□ -0.24
TPM3-219ENST00000509409 REG4Q9BYZ8 158 aa13.58□□□□□ -0.24
TPM3-219ENST00000509409 MTHFD2LQ9H903 347 aaPredicted RBP13.58□□□□□ -0.24
TPM3-219ENST00000509409 ASB6Q9NWX5 421 aa13.58□□□□□ -0.24
TPM3-219ENST00000509409 TMEM181Q9P2C4 612 aa13.58□□□□□ -0.24
TPM3-219ENST00000509409 HAO1Q9UJM8 370 aa13.58□□□□□ -0.24
TPM3-219ENST00000509409 POU2F3Q9UKI9 436 aa13.58□□□□□ -0.24
TPM3-219ENST00000509409 TRAPPC4Q9Y296 219 aa13.58□□□□□ -0.24
TPM3-219ENST00000509409 TMED7Q9Y3B3 224 aa13.58□□□□□ -0.24
TPM3-219ENST00000509409 CSPG4Q6UVK1 2322 aa13.57□□□□□ -0.24
TPM3-219ENST00000509409 FN1P02751 2386 aaKnown RBP13.57□□□□□ -0.24
TPM3-219ENST00000509409 RAI1Q7Z5J4 1906 aaPredicted RBP13.57□□□□□ -0.24
TPM3-219ENST00000509409 HIVEP2P31629 2446 aa13.57□□□□□ -0.24
TPM3-219ENST00000509409 GOLGA8QA0A0J9YX86 632 aa13.57□□□□□ -0.24
TPM3-219ENST00000509409 GOLGA8OA6NCC3 632 aa13.57□□□□□ -0.24
TPM3-219ENST00000509409 ZNF716A6NP11 495 aa13.57□□□□□ -0.24
TPM3-219ENST00000509409 GOLGA8NF8WBI6 632 aa13.57□□□□□ -0.24
TPM3-219ENST00000509409 SDHDO14521 159 aa13.57□□□□□ -0.24
TPM3-219ENST00000509409 AP3D1O14617 1153 aa13.57□□□□□ -0.24
TPM3-219ENST00000509409 PGM3O95394 542 aa13.57□□□□□ -0.24
TPM3-219ENST00000509409 TP53P04637 393 aaPredicted RBP13.57□□□□□ -0.24
TPM3-219ENST00000509409 PGRP06401 933 aa13.57□□□□□ -0.24
TPM3-219ENST00000509409 ALDOCP09972 364 aaKnown RBP13.57□□□□□ -0.24
TPM3-219ENST00000509409 KITP10721 976 aa13.57□□□□□ -0.24
TPM3-219ENST00000509409 COX5AP20674 150 aa13.57□□□□□ -0.24
TPM3-219ENST00000509409 PTNP21246 168 aa13.57□□□□□ -0.24
TPM3-219ENST00000509409 IL12AP29459 219 aa13.57□□□□□ -0.24
TPM3-219ENST00000509409 ACVR1BP36896 505 aa13.57□□□□□ -0.24
TPM3-219ENST00000509409 ZNF83P51522 516 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms