RNA–Protein interactions for RNA: ENST00000509330.5

PHF3-209, Transcript of PHD finger protein 3, humanhuman

TSL 1 (best) BASIC

Gene PHF3, Length 2,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-209ENST00000509330 SGTBQ96EQ0 304 aa13.62□□□□□ -0.23
PHF3-209ENST00000509330 HMG20AQ9NP66 347 aa13.62□□□□□ -0.23
PHF3-209ENST00000509330 AKIP1Q9NQ31 210 aa13.62□□□□□ -0.23
PHF3-209ENST00000509330 RARRES3Q9UL19 164 aa13.62□□□□□ -0.23
PHF3-209ENST00000509330 TMEM5Q9Y2B1 443 aa13.62□□□□□ -0.23
PHF3-209ENST00000509330 TEX51A0A1B0GUA7 166 aa13.62□□□□□ -0.23
PHF3-209ENST00000509330 METTL15A6NJ78 407 aa13.62□□□□□ -0.23
PHF3-209ENST00000509330 DVL2O14641 736 aa13.62□□□□□ -0.23
PHF3-209ENST00000509330 RGS5O15539 181 aa13.62□□□□□ -0.23
PHF3-209ENST00000509330 ZNF264O43296 627 aa13.62□□□□□ -0.23
PHF3-209ENST00000509330 CDC40O60508 579 aaKnown RBP eCLIP13.62□□□□□ -0.23
PHF3-209ENST00000509330 IFI6P09912 130 aa13.62□□□□□ -0.23
PHF3-209ENST00000509330 TDGF1P13385 188 aa13.62□□□□□ -0.23
PHF3-209ENST00000509330 HIST1H1CP16403 213 aaKnown RBP13.62□□□□□ -0.23
PHF3-209ENST00000509330 ABCD3P28288 659 aa13.62□□□□□ -0.23
PHF3-209ENST00000509330 HTR1FP30939 366 aa13.62□□□□□ -0.23
PHF3-209ENST00000509330 RPS19P39019 145 aaKnown RBP13.62□□□□□ -0.23
PHF3-209ENST00000509330 CRYBB2P43320 205 aa13.62□□□□□ -0.23
PHF3-209ENST00000509330 PSMD4P55036 377 aaKnown RBP13.62□□□□□ -0.23
PHF3-209ENST00000509330 CAV3P56539 151 aa13.62□□□□□ -0.23
PHF3-209ENST00000509330 ERVK-25P63136 954 aa13.62□□□□□ -0.23
PHF3-209ENST00000509330 ZNF117Q03924 483 aa13.62□□□□□ -0.23
PHF3-209ENST00000509330 LNX2Q8N448 690 aa13.62□□□□□ -0.23
PHF3-209ENST00000509330 SNRNP27Q8WVK2 155 aaKnown RBP13.62□□□□□ -0.23
PHF3-209ENST00000509330 RASD2Q96D21 266 aa13.62□□□□□ -0.23
PHF3-209ENST00000509330 ZMYND19Q96E35 227 aaPredicted RBP13.62□□□□□ -0.23
PHF3-209ENST00000509330 MOGAT1Q96PD6 335 aa13.62□□□□□ -0.23
PHF3-209ENST00000509330 HDHD5Q9BXW7 423 aa13.62□□□□□ -0.23
PHF3-209ENST00000509330 CCDC86Q9H6F5 360 aaKnown RBP13.62□□□□□ -0.23
PHF3-209ENST00000509330 ZNF346Q9UL40 294 aaKnown RBP13.62□□□□□ -0.23
PHF3-209ENST00000509330 FRG2CA6NGY1 282 aa13.62□□□□□ -0.23
PHF3-209ENST00000509330 RIIAD1A6NNX1 92 aa13.62□□□□□ -0.23
PHF3-209ENST00000509330 CTDSP2O14595 271 aa13.62□□□□□ -0.23
PHF3-209ENST00000509330 ZNF354AO60765 605 aaPredicted RBP13.62□□□□□ -0.23
PHF3-209ENST00000509330 PTP4A3O75365 173 aa13.62□□□□□ -0.23
PHF3-209ENST00000509330 RGS19P49795 217 aa13.62□□□□□ -0.23
PHF3-209ENST00000509330 IFITM3Q01628 133 aa13.62□□□□□ -0.23
PHF3-209ENST00000509330 MLLT11Q13015 90 aaPredicted RBP13.62□□□□□ -0.23
PHF3-209ENST00000509330 SKP2Q13309 424 aa13.62□□□□□ -0.23
PHF3-209ENST00000509330 FHL1Q13642 323 aa13.62□□□□□ -0.23
PHF3-209ENST00000509330 CRTC2Q53ET0 693 aaPredicted RBP13.62□□□□□ -0.23
PHF3-209ENST00000509330 RHBDD2Q6NTF9 364 aa13.62□□□□□ -0.23
PHF3-209ENST00000509330 RFLNBQ8N5W9 214 aa13.62□□□□□ -0.23
PHF3-209ENST00000509330 MOSPD2Q8NHP6 518 aa13.62□□□□□ -0.23
PHF3-209ENST00000509330 DACH2Q96NX9 599 aa13.62□□□□□ -0.23
PHF3-209ENST00000509330 TBL1XR1Q9BZK7 514 aa13.62□□□□□ -0.23
PHF3-209ENST00000509330 QPCTLQ9NXS2 382 aa13.62□□□□□ -0.23
PHF3-209ENST00000509330 A0A087WUJ7 227 aa13.61□□□□□ -0.23
PHF3-209ENST00000509330 F13BP05160 661 aa13.61□□□□□ -0.23
PHF3-209ENST00000509330 NAA10P41227 235 aaPredicted RBP13.61□□□□□ -0.23
PHF3-209ENST00000509330 CTBP2P56545 445 aa13.61□□□□□ -0.23
PHF3-209ENST00000509330 ZNF846Q147U1 533 aa13.61□□□□□ -0.23
PHF3-209ENST00000509330 ZNF362Q5T0B9 420 aaPredicted RBP13.61□□□□□ -0.23
PHF3-209ENST00000509330 OR1N1Q8NGS0 311 aa13.61□□□□□ -0.23
PHF3-209ENST00000509330 FNDC8Q8TC99 324 aa13.61□□□□□ -0.23
PHF3-209ENST00000509330 PMM1Q92871 262 aa13.61□□□□□ -0.23
PHF3-209ENST00000509330 NMNAT3Q96T66 252 aa13.61□□□□□ -0.23
PHF3-209ENST00000509330 ZNF426Q9BUY5 554 aa13.61□□□□□ -0.23
PHF3-209ENST00000509330 CMC2Q9NRP2 79 aa13.61□□□□□ -0.23
PHF3-209ENST00000509330 RHBDL2Q9NX52 303 aa13.61□□□□□ -0.23
PHF3-209ENST00000509330 SLC35A3Q9Y2D2 325 aa13.61□□□□□ -0.23
PHF3-209ENST00000509330 CAB39Q9Y376 341 aaPredicted RBP13.61□□□□□ -0.23
PHF3-209ENST00000509330 IGKV1D-42A0A075B6H8 117 aa13.61□□□□□ -0.23
PHF3-209ENST00000509330 EFCAB7A8K855 629 aa13.61□□□□□ -0.23
PHF3-209ENST00000509330 NDUFB5O43674 189 aa13.61□□□□□ -0.23
PHF3-209ENST00000509330 CDRT1O95170 752 aa13.61□□□□□ -0.23
PHF3-209ENST00000509330 TACR3P29371 465 aa13.61□□□□□ -0.23
PHF3-209ENST00000509330 AQP2P41181 271 aa13.61□□□□□ -0.23
PHF3-209ENST00000509330 ACY1Q03154 408 aa13.61□□□□□ -0.23
PHF3-209ENST00000509330 SIGLEC14Q08ET2 396 aa13.61□□□□□ -0.23
PHF3-209ENST00000509330 TIMM50Q3ZCQ8 353 aa13.61□□□□□ -0.23
PHF3-209ENST00000509330 C1QL3Q5VWW1 255 aa13.61□□□□□ -0.23
PHF3-209ENST00000509330 OTPQ5XKR4 325 aa13.61□□□□□ -0.23
PHF3-209ENST00000509330 RTL4Q6ZR62 310 aa13.61□□□□□ -0.23
PHF3-209ENST00000509330 KMT5CQ86Y97 462 aa13.61□□□□□ -0.23
PHF3-209ENST00000509330 MFSD4AQ8N468 514 aa13.61□□□□□ -0.23
PHF3-209ENST00000509330 TMEM105Q8N8V8 129 aa13.61□□□□□ -0.23
PHF3-209ENST00000509330 NUAK2Q9H093 628 aa13.61□□□□□ -0.23
PHF3-209ENST00000509330 FGF20Q9NP95 211 aaPredicted RBP13.61□□□□□ -0.23
PHF3-209ENST00000509330 PRMT8Q9NR22 394 aaPredicted RBP13.61□□□□□ -0.23
PHF3-209ENST00000509330 NDUFB11Q9NX14 153 aa13.61□□□□□ -0.23
PHF3-209ENST00000509330 ERVK13-1Q9NX77 482 aa13.61□□□□□ -0.23
PHF3-209ENST00000509330 SEC14L4Q9UDX3 406 aa13.61□□□□□ -0.23
PHF3-209ENST00000509330 SSR3Q9UNL2 185 aa13.61□□□□□ -0.23
PHF3-209ENST00000509330 GRPRP30550 384 aa13.6□□□□□ -0.23
PHF3-209ENST00000509330 RPS5P46782 204 aaKnown RBP13.6□□□□□ -0.23
PHF3-209ENST00000509330 GPR143P51810 404 aa13.6□□□□□ -0.23
PHF3-209ENST00000509330 CLDN6P56747 220 aa13.6□□□□□ -0.23
PHF3-209ENST00000509330 MEPCEQ7L2J0 689 aaKnown RBP13.6□□□□□ -0.23
PHF3-209ENST00000509330 CLDN22Q8N7P3 220 aa13.6□□□□□ -0.23
PHF3-209ENST00000509330 PSD4Q8NDX1 1056 aa13.6□□□□□ -0.23
PHF3-209ENST00000509330 OR14A16Q8NHC5 309 aa13.6□□□□□ -0.23
PHF3-209ENST00000509330 ZNRF4Q8WWF5 429 aa13.6□□□□□ -0.23
PHF3-209ENST00000509330 KTI12Q96EK9 354 aaPredicted RBP13.6□□□□□ -0.23
PHF3-209ENST00000509330 ABCB10Q9NRK6 738 aa13.6□□□□□ -0.23
PHF3-209ENST00000509330 SEMA5BQ9P283 1151 aa13.6□□□□□ -0.23
PHF3-209ENST00000509330 STUB1Q9UNE7 303 aa13.6□□□□□ -0.23
PHF3-209ENST00000509330 PCNX3Q9H6A9 2034 aa13.6□□□□□ -0.23
PHF3-209ENST00000509330 H7C1C5 153 aa13.6□□□□□ -0.23
PHF3-209ENST00000509330 ZNF3P17036 446 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms