RNA–Protein interactions for RNA: ENST00000509112.1

CALCOCO2-213, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 3

Gene CALCOCO2, Length 459 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-213ENST00000509112 DDX39BQ13838 428 aaKnown RBP3.83□□□□□ -1.8
CALCOCO2-213ENST00000509112 GTF2H2Q13888 395 aa3.83□□□□□ -1.8
CALCOCO2-213ENST00000509112 EXOSC7Q15024 291 aaKnown RBP3.83□□□□□ -1.8
CALCOCO2-213ENST00000509112 NNATQ16517 81 aa3.83□□□□□ -1.8
CALCOCO2-213ENST00000509112 SGCBQ16585 318 aa3.83□□□□□ -1.8
CALCOCO2-213ENST00000509112 EXOC3L2Q2M3D2 409 aa3.83□□□□□ -1.8
CALCOCO2-213ENST00000509112 ERCC6LQ2NKX8 1250 aa3.83□□□□□ -1.8
CALCOCO2-213ENST00000509112 TRMT12Q53H54 448 aaKnown RBP3.83□□□□□ -1.8
CALCOCO2-213ENST00000509112 FBXO48Q5FWF7 155 aa3.83□□□□□ -1.8
CALCOCO2-213ENST00000509112 TCHHL1Q5QJ38 904 aaPredicted RBP3.83□□□□□ -1.8
CALCOCO2-213ENST00000509112 TIMM23BQ5SRD1 257 aa3.83□□□□□ -1.8
CALCOCO2-213ENST00000509112 CCNYL2Q5T2Q4 361 aa3.83□□□□□ -1.8
CALCOCO2-213ENST00000509112 GRTP1Q5TC63 336 aa3.83□□□□□ -1.8
CALCOCO2-213ENST00000509112 FRG2Q64ET8 278 aa3.83□□□□□ -1.8
CALCOCO2-213ENST00000509112 FAM166AQ6J272 317 aa3.83□□□□□ -1.8
CALCOCO2-213ENST00000509112 ZNF544Q6NX49 715 aa3.83□□□□□ -1.8
CALCOCO2-213ENST00000509112 GTF2H2CQ6P1K8 395 aa3.83□□□□□ -1.8
CALCOCO2-213ENST00000509112 MZT2AQ6P582 158 aa3.83□□□□□ -1.8
CALCOCO2-213ENST00000509112 CRIP3Q6Q6R5 217 aa3.83□□□□□ -1.8
CALCOCO2-213ENST00000509112 UGT2A3Q6UWM9 527 aa3.83□□□□□ -1.8
CALCOCO2-213ENST00000509112 TFAP2EQ6VUC0 442 aa3.83□□□□□ -1.8
CALCOCO2-213ENST00000509112 NPSR1Q6W5P4 371 aa3.83□□□□□ -1.8
CALCOCO2-213ENST00000509112 Q6ZT83 130 aa3.83□□□□□ -1.8
CALCOCO2-213ENST00000509112 TRABD2AQ86V40 505 aa3.83□□□□□ -1.8
CALCOCO2-213ENST00000509112 MISPQ8IVT2 679 aa3.83□□□□□ -1.8
CALCOCO2-213ENST00000509112 UBQLNLQ8IYU4 475 aa3.83□□□□□ -1.8
CALCOCO2-213ENST00000509112 SLC43A2Q8N370 569 aa3.83□□□□□ -1.8
CALCOCO2-213ENST00000509112 RNF175Q8N4F7 328 aa3.83□□□□□ -1.8
CALCOCO2-213ENST00000509112 OR2C3Q8N628 320 aa3.83□□□□□ -1.8
CALCOCO2-213ENST00000509112 TEX9Q8N6V9 391 aa3.83□□□□□ -1.8
CALCOCO2-213ENST00000509112 FBXO36Q8NEA4 188 aa3.83□□□□□ -1.8
CALCOCO2-213ENST00000509112 OR10D3Q8NH80 312 aa3.83□□□□□ -1.8
CALCOCO2-213ENST00000509112 RNF128Q8TEB7 428 aa3.83□□□□□ -1.8
CALCOCO2-213ENST00000509112 CPNE4Q96A23 557 aaPredicted RBP3.83□□□□□ -1.8
CALCOCO2-213ENST00000509112 S100PBPQ96BU1 408 aa3.83□□□□□ -1.8
CALCOCO2-213ENST00000509112 CNRIP1Q96F85 164 aaPredicted RBP3.83□□□□□ -1.8
CALCOCO2-213ENST00000509112 CFAP36Q96G28 342 aa3.83□□□□□ -1.8
CALCOCO2-213ENST00000509112 SNX22Q96L94 193 aa3.83□□□□□ -1.8
CALCOCO2-213ENST00000509112 FRG2BQ96QU4 278 aa3.83□□□□□ -1.8
CALCOCO2-213ENST00000509112 DHRS9Q9BPW9 319 aa3.83□□□□□ -1.8
CALCOCO2-213ENST00000509112 ZNF747Q9BV97 191 aa3.83□□□□□ -1.8
CALCOCO2-213ENST00000509112 ALG8Q9BVK2 526 aa3.83□□□□□ -1.8
CALCOCO2-213ENST00000509112 PRRG4Q9BZD6 226 aa3.83□□□□□ -1.8
CALCOCO2-213ENST00000509112 PLA2G12AQ9BZM1 189 aa3.83□□□□□ -1.8
CALCOCO2-213ENST00000509112 ALG9Q9H6U8 611 aa3.83□□□□□ -1.8
CALCOCO2-213ENST00000509112 FOLH1BQ9HBA9 442 aa3.83□□□□□ -1.8
CALCOCO2-213ENST00000509112 C3orf14Q9HBI5 128 aa3.83□□□□□ -1.8
CALCOCO2-213ENST00000509112 MYOZ1Q9NP98 299 aaPredicted RBP3.83□□□□□ -1.8
CALCOCO2-213ENST00000509112 SMYD2Q9NRG4 433 aa3.83□□□□□ -1.8
CALCOCO2-213ENST00000509112 NMRK1Q9NWW6 199 aa3.83□□□□□ -1.8
CALCOCO2-213ENST00000509112 VSX1Q9NZR4 365 aaPredicted RBP3.83□□□□□ -1.8
CALCOCO2-213ENST00000509112 TXNDC16Q9P2K2 825 aa3.83□□□□□ -1.8
CALCOCO2-213ENST00000509112 FBXO9Q9UK97 447 aaPredicted RBP3.83□□□□□ -1.8
CALCOCO2-213ENST00000509112 GRID1Q9ULK0 1009 aa3.83□□□□□ -1.8
CALCOCO2-213ENST00000509112 KCNS2Q9ULS6 477 aa3.83□□□□□ -1.8
CALCOCO2-213ENST00000509112 B3GALT5Q9Y2C3 310 aa3.83□□□□□ -1.8
CALCOCO2-213ENST00000509112 WBP11Q9Y2W2 641 aaKnown RBP3.83□□□□□ -1.8
CALCOCO2-213ENST00000509112 ANGPTL3Q9Y5C1 460 aa3.83□□□□□ -1.8
CALCOCO2-213ENST00000509112 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP3.83□□□□□ -1.82e-10■■■■□ 25
CALCOCO2-213ENST00000509112 UQCRHLA0A096LP55 91 aa3.82□□□□□ -1.8
CALCOCO2-213ENST00000509112 CENPVL1A0A0U1RR11 272 aa3.82□□□□□ -1.8
CALCOCO2-213ENST00000509112 A0A1W2PQD3 144 aa3.82□□□□□ -1.8
CALCOCO2-213ENST00000509112 FAM234BA2RU67 622 aa3.82□□□□□ -1.8
CALCOCO2-213ENST00000509112 SUPT3HB4E1H0 165 aa3.82□□□□□ -1.8
CALCOCO2-213ENST00000509112 H0YC42 278 aa3.82□□□□□ -1.8
CALCOCO2-213ENST00000509112 STX16-NPEPL1H3BU86 382 aa3.82□□□□□ -1.8
CALCOCO2-213ENST00000509112 UBXN8O00124 270 aa3.82□□□□□ -1.8
CALCOCO2-213ENST00000509112 KIF2AO00139 706 aaPredicted RBP3.82□□□□□ -1.8
CALCOCO2-213ENST00000509112 UBFD1O14562 309 aaKnown RBP3.82□□□□□ -1.8
CALCOCO2-213ENST00000509112 OR7A17O14581 309 aa3.82□□□□□ -1.8
CALCOCO2-213ENST00000509112 STX16O14662 325 aa3.82□□□□□ -1.8
CALCOCO2-213ENST00000509112 SEC14L5O43304 696 aa3.82□□□□□ -1.8
CALCOCO2-213ENST00000509112 RGS14O43566 566 aa3.82□□□□□ -1.8
CALCOCO2-213ENST00000509112 TCF21O43680 179 aa3.82□□□□□ -1.8
CALCOCO2-213ENST00000509112 SSX4O60224 188 aa3.82□□□□□ -1.8
CALCOCO2-213ENST00000509112 NDUFS7O75251 213 aa3.82□□□□□ -1.8
CALCOCO2-213ENST00000509112 SUPT3HO75486 399 aa3.82□□□□□ -1.8
CALCOCO2-213ENST00000509112 ERAL1O75616 437 aaKnown RBP3.82□□□□□ -1.8
CALCOCO2-213ENST00000509112 ZFPL1O95159 310 aa3.82□□□□□ -1.8
CALCOCO2-213ENST00000509112 SYNGR4O95473 234 aa3.82□□□□□ -1.8
CALCOCO2-213ENST00000509112 HSPA4LO95757 839 aa3.82□□□□□ -1.8
CALCOCO2-213ENST00000509112 MT-ND5P03915 603 aa3.82□□□□□ -1.8
CALCOCO2-213ENST00000509112 YES1P07947 543 aa3.82□□□□□ -1.8
CALCOCO2-213ENST00000509112 TNFRSF1AP19438 455 aa3.82□□□□□ -1.8
CALCOCO2-213ENST00000509112 COX5AP20674 150 aa3.82□□□□□ -1.8
CALCOCO2-213ENST00000509112 PAX7P23759 505 aa3.82□□□□□ -1.8
CALCOCO2-213ENST00000509112 IL32P24001 234 aa3.82□□□□□ -1.8
CALCOCO2-213ENST00000509112 PTAFRP25105 342 aa3.82□□□□□ -1.8
CALCOCO2-213ENST00000509112 MPIP34949 423 aa3.82□□□□□ -1.8
CALCOCO2-213ENST00000509112 FEN1P39748 380 aaKnown RBP3.82□□□□□ -1.8
CALCOCO2-213ENST00000509112 MAP3K8P41279 467 aa3.82□□□□□ -1.8
CALCOCO2-213ENST00000509112 EIF1P41567 113 aaKnown RBP3.82□□□□□ -1.8
CALCOCO2-213ENST00000509112 EFNA4P52798 201 aa3.82□□□□□ -1.8
CALCOCO2-213ENST00000509112 TPD52P55327 224 aaPredicted RBP3.82□□□□□ -1.8
CALCOCO2-213ENST00000509112 RPS16P62249 146 aaKnown RBP3.82□□□□□ -1.8
CALCOCO2-213ENST00000509112 IRX1P78414 480 aaPredicted RBP3.82□□□□□ -1.8
CALCOCO2-213ENST00000509112 BSPH1Q075Z2 132 aa3.82□□□□□ -1.8
CALCOCO2-213ENST00000509112 PDIA2Q13087 525 aaKnown RBP3.82□□□□□ -1.8
CALCOCO2-213ENST00000509112 IFT88Q13099 833 aa3.82□□□□□ -1.8
CALCOCO2-213ENST00000509112 HEPACAMQ14CZ8 416 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms