RNA–Protein interactions for RNA: ENST00000508546.5

NEDD9-211, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5

Gene NEDD9, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-211ENST00000508546 CDS1Q92903 461 aa8.19□□□□□ -1.1
NEDD9-211ENST00000508546 PPCDCQ96CD2 204 aa8.19□□□□□ -1.1
NEDD9-211ENST00000508546 ZHX1-C8orf76Q96EF9 292 aa8.19□□□□□ -1.1
NEDD9-211ENST00000508546 FAM120BQ96EK7 910 aaKnown RBP8.19□□□□□ -1.1
NEDD9-211ENST00000508546 OTUB1Q96FW1 271 aaPredicted RBP8.19□□□□□ -1.1
NEDD9-211ENST00000508546 BOD1Q96IK1 185 aa8.19□□□□□ -1.1
NEDD9-211ENST00000508546 FCRL1Q96LA6 429 aa8.19□□□□□ -1.1
NEDD9-211ENST00000508546 ZIM3Q96PE6 472 aa8.19□□□□□ -1.1
NEDD9-211ENST00000508546 CCT7Q99832 543 aa8.19□□□□□ -1.1
NEDD9-211ENST00000508546 VRK1Q99986 396 aaPredicted RBP8.19□□□□□ -1.1
NEDD9-211ENST00000508546 GSTO2Q9H4Y5 243 aa8.19□□□□□ -1.1
NEDD9-211ENST00000508546 MID1IP1Q9NPA3 183 aa8.19□□□□□ -1.1
NEDD9-211ENST00000508546 SERINC1Q9NRX5 453 aa8.19□□□□□ -1.1
NEDD9-211ENST00000508546 SIRT3Q9NTG7 399 aaPredicted RBP8.19□□□□□ -1.1
NEDD9-211ENST00000508546 FAM53CQ9NYF3 392 aa8.19□□□□□ -1.1
NEDD9-211ENST00000508546 SH3BP4Q9P0V3 963 aa8.19□□□□□ -1.1
NEDD9-211ENST00000508546 FBXO9Q9UK97 447 aaPredicted RBP8.19□□□□□ -1.1
NEDD9-211ENST00000508546 MOKQ9UQ07 419 aa8.19□□□□□ -1.1
NEDD9-211ENST00000508546 CCL27Q9Y4X3 112 aa8.19□□□□□ -1.1
NEDD9-211ENST00000508546 CMYA5Q8N3K9 4069 aa8.18□□□□□ -1.1
NEDD9-211ENST00000508546 SEC22BO75396 215 aa8.18□□□□□ -1.1
NEDD9-211ENST00000508546 SNUPNO95149 360 aaKnown RBP8.18□□□□□ -1.1
NEDD9-211ENST00000508546 PMS2P2O95744 297 aa8.18□□□□□ -1.1
NEDD9-211ENST00000508546 WNT11O96014 354 aa8.18□□□□□ -1.1
NEDD9-211ENST00000508546 SNRPAP09012 282 aaKnown RBP8.18□□□□□ -1.1
NEDD9-211ENST00000508546 UBL4AP11441 157 aa8.18□□□□□ -1.1
NEDD9-211ENST00000508546 APEX1P27695 318 aaKnown RBP8.18□□□□□ -1.1
NEDD9-211ENST00000508546 IL2RGP31785 369 aa8.18□□□□□ -1.1
NEDD9-211ENST00000508546 PPOXP50336 477 aa8.18□□□□□ -1.1
NEDD9-211ENST00000508546 IDH3GP51553 393 aaPredicted RBP8.18□□□□□ -1.1
NEDD9-211ENST00000508546 CCR4P51679 360 aa8.18□□□□□ -1.1
NEDD9-211ENST00000508546 DVL1P1P54792 670 aaPredicted RBP8.18□□□□□ -1.1
NEDD9-211ENST00000508546 SESN3P58005 492 aa8.18□□□□□ -1.1
NEDD9-211ENST00000508546 PRPS1P60891 318 aa8.18□□□□□ -1.1
NEDD9-211ENST00000508546 NAA20P61599 178 aa8.18□□□□□ -1.1
NEDD9-211ENST00000508546 ACTG1P63261 375 aa8.18□□□□□ -1.1
NEDD9-211ENST00000508546 EFNB3Q15768 340 aa8.18□□□□□ -1.1
NEDD9-211ENST00000508546 DCST2Q5T1A1 773 aa8.18□□□□□ -1.1
NEDD9-211ENST00000508546 TIFABQ6ZNK6 161 aa8.18□□□□□ -1.1
NEDD9-211ENST00000508546 TRMT10CQ7L0Y3 403 aaKnown RBP8.18□□□□□ -1.1
NEDD9-211ENST00000508546 TMCO5AQ8N6Q1 288 aa8.18□□□□□ -1.1
NEDD9-211ENST00000508546 GOLGA6L1Q8N7Z2 621 aa8.18□□□□□ -1.1
NEDD9-211ENST00000508546 OR52E4Q8NGH9 312 aa8.18□□□□□ -1.1
NEDD9-211ENST00000508546 RFWD2Q8NHY2 731 aa8.18□□□□□ -1.1
NEDD9-211ENST00000508546 TMEM234Q8WY98 164 aa8.18□□□□□ -1.1
NEDD9-211ENST00000508546 MTERF3Q96E29 417 aa8.18□□□□□ -1.1
NEDD9-211ENST00000508546 CHMP6Q96FZ7 201 aa8.18□□□□□ -1.1
NEDD9-211ENST00000508546 ACTRT3Q9BYD9 372 aa8.18□□□□□ -1.1
NEDD9-211ENST00000508546 LAT2Q9GZY6 243 aa8.18□□□□□ -1.1
NEDD9-211ENST00000508546 QRSL1Q9H0R6 528 aaKnown RBP8.18□□□□□ -1.1
NEDD9-211ENST00000508546 RAB1BQ9H0U4 201 aa8.18□□□□□ -1.1
NEDD9-211ENST00000508546 CDC42EP4Q9H3Q1 356 aaKnown RBP8.18□□□□□ -1.1
NEDD9-211ENST00000508546 PLK3Q9H4B4 646 aa8.18□□□□□ -1.1
NEDD9-211ENST00000508546 OCEL1Q9H607 264 aa8.18□□□□□ -1.1
NEDD9-211ENST00000508546 MED4Q9NPJ6 270 aa8.18□□□□□ -1.1
NEDD9-211ENST00000508546 CA10Q9NS85 328 aa8.18□□□□□ -1.1
NEDD9-211ENST00000508546 ZCCHC3Q9NUD5 404 aaKnown RBP8.18□□□□□ -1.1
NEDD9-211ENST00000508546 ACER3Q9NUN7 267 aa8.18□□□□□ -1.1
NEDD9-211ENST00000508546 FAM157AC9JC47 383 aa8.17□□□□□ -1.1
NEDD9-211ENST00000508546 POC1B-GALNT4F8VUJ3 575 aa8.17□□□□□ -1.1
NEDD9-211ENST00000508546 RIPK2O43353 540 aa8.17□□□□□ -1.1
NEDD9-211ENST00000508546 AKAP10O43572 662 aa8.17□□□□□ -1.1
NEDD9-211ENST00000508546 KRT16P08779 473 aa8.17□□□□□ -1.1
NEDD9-211ENST00000508546 NUDT17P0C025 328 aa8.17□□□□□ -1.1
NEDD9-211ENST00000508546 CREB1P16220 341 aa8.17□□□□□ -1.1
NEDD9-211ENST00000508546 SDC1P18827 310 aa8.17□□□□□ -1.1
NEDD9-211ENST00000508546 PGCP20142 388 aa8.17□□□□□ -1.1
NEDD9-211ENST00000508546 PAX7P23759 505 aa8.17□□□□□ -1.1
NEDD9-211ENST00000508546 FKBP2P26885 142 aaKnown RBP8.17□□□□□ -1.1
NEDD9-211ENST00000508546 MPGP29372 298 aa8.17□□□□□ -1.1
NEDD9-211ENST00000508546 MAGEA8P43361 318 aa8.17□□□□□ -1.1
NEDD9-211ENST00000508546 CLK1P49759 484 aaKnown RBP8.17□□□□□ -1.1
NEDD9-211ENST00000508546 RNF144AP50876 292 aaPredicted RBP8.17□□□□□ -1.1
NEDD9-211ENST00000508546 H3F3AP84243 136 aa8.17□□□□□ -1.1
NEDD9-211ENST00000508546 MERTKQ12866 999 aa8.17□□□□□ -1.1
NEDD9-211ENST00000508546 SCGB2A2Q13296 93 aa8.17□□□□□ -1.1
NEDD9-211ENST00000508546 SKP2Q13309 424 aa8.17□□□□□ -1.1
NEDD9-211ENST00000508546 ADIPOQQ15848 244 aa8.17□□□□□ -1.1
NEDD9-211ENST00000508546 KLHL24Q6TFL4 600 aa8.17□□□□□ -1.1
NEDD9-211ENST00000508546 CASP12Q6UXS9 341 aa8.17□□□□□ -1.1
NEDD9-211ENST00000508546 ZNF786Q8N393 782 aa8.17□□□□□ -1.1
NEDD9-211ENST00000508546 ZNF614Q8N883 585 aa8.17□□□□□ -1.1
NEDD9-211ENST00000508546 PSMA8Q8TAA3 256 aa8.17□□□□□ -1.1
NEDD9-211ENST00000508546 ADAMTS15Q8TE58 950 aa8.17□□□□□ -1.1
NEDD9-211ENST00000508546 FAM216AQ8WUB2 273 aa8.17□□□□□ -1.1
NEDD9-211ENST00000508546 NEU4Q8WWR8 484 aaPredicted RBP8.17□□□□□ -1.1
NEDD9-211ENST00000508546 GCDHQ92947 438 aaPredicted RBP8.17□□□□□ -1.1
NEDD9-211ENST00000508546 CCDC126Q96EE4 140 aa8.17□□□□□ -1.1
NEDD9-211ENST00000508546 TSSK3Q96PN8 268 aa8.17□□□□□ -1.1
NEDD9-211ENST00000508546 THUMPD3Q9BV44 507 aaKnown RBP8.17□□□□□ -1.1
NEDD9-211ENST00000508546 KATNB1Q9BVA0 655 aa8.17□□□□□ -1.1
NEDD9-211ENST00000508546 NMUR2Q9GZQ4 415 aa8.17□□□□□ -1.1
NEDD9-211ENST00000508546 SAP130Q9H0E3 1048 aa8.17□□□□□ -1.1
NEDD9-211ENST00000508546 METTL17Q9H7H0 456 aaPredicted RBP8.17□□□□□ -1.1
NEDD9-211ENST00000508546 OBP2BQ9NPH6 170 aa8.17□□□□□ -1.1
NEDD9-211ENST00000508546 SLC7A10Q9NS82 523 aa8.17□□□□□ -1.1
NEDD9-211ENST00000508546 PARPBPQ9NWS1 579 aa8.17□□□□□ -1.1
NEDD9-211ENST00000508546 C1orf109Q9NX04 203 aa8.17□□□□□ -1.1
NEDD9-211ENST00000508546 UPB1Q9UBR1 384 aa8.17□□□□□ -1.1
NEDD9-211ENST00000508546 HDGFL3Q9Y3E1 203 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms