RNA–Protein interactions for RNA: ENST00000507293.1

HMGCS1-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 1 (best)

Gene HMGCS1, Length 708 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-204ENST00000507293 CASP8Q14790 479 aa10.18□□□□□ -0.78
HMGCS1-204ENST00000507293 PDK3Q15120 406 aa10.18□□□□□ -0.78
HMGCS1-204ENST00000507293 KRT71Q3SY84 523 aa10.18□□□□□ -0.78
HMGCS1-204ENST00000507293 GPAT3Q53EU6 434 aa10.18□□□□□ -0.78
HMGCS1-204ENST00000507293 FBXW9Q5XUX1 488 aa10.18□□□□□ -0.78
HMGCS1-204ENST00000507293 GRINAQ7Z429 371 aa10.18□□□□□ -0.78
HMGCS1-204ENST00000507293 DTX2Q86UW9 622 aa10.18□□□□□ -0.78
HMGCS1-204ENST00000507293 P2RY8Q86VZ1 359 aa10.18□□□□□ -0.78
HMGCS1-204ENST00000507293 UBE2J2Q8N2K1 259 aa10.18□□□□□ -0.78
HMGCS1-204ENST00000507293 ARFGAP2Q8N6H7 521 aa10.18□□□□□ -0.78
HMGCS1-204ENST00000507293 ZNF433Q8N7K0 673 aaPredicted RBP10.18□□□□□ -0.78
HMGCS1-204ENST00000507293 VPS37AQ8NEZ2 397 aa10.18□□□□□ -0.78
HMGCS1-204ENST00000507293 OR52N5Q8NH56 324 aa10.18□□□□□ -0.78
HMGCS1-204ENST00000507293 APH1AQ96BI3 265 aa10.18□□□□□ -0.78
HMGCS1-204ENST00000507293 TESCQ96BS2 214 aa10.18□□□□□ -0.78
HMGCS1-204ENST00000507293 NEURL3Q96EH8 262 aa10.18□□□□□ -0.78
HMGCS1-204ENST00000507293 HS6ST2Q96MM7 605 aa10.18□□□□□ -0.78
HMGCS1-204ENST00000507293 SORT1Q99523 831 aa10.18□□□□□ -0.78
HMGCS1-204ENST00000507293 NUF2Q9BZD4 464 aa10.18□□□□□ -0.78
HMGCS1-204ENST00000507293 OR11A1Q9GZK7 315 aa10.18□□□□□ -0.78
HMGCS1-204ENST00000507293 SAP130Q9H0E3 1048 aa10.18□□□□□ -0.78
HMGCS1-204ENST00000507293 ST6GALNAC1Q9NSC7 600 aaPredicted RBP10.18□□□□□ -0.78
HMGCS1-204ENST00000507293 MARCOQ9UEW3 520 aaPredicted RBP10.18□□□□□ -0.78
HMGCS1-204ENST00000507293 JMJD1CQ15652 2540 aa10.18□□□□□ -0.78
HMGCS1-204ENST00000507293 ZANQ9Y493 2812 aa10.18□□□□□ -0.78
HMGCS1-204ENST00000507293 GOLGA8QA0A0J9YX86 632 aa10.17□□□□□ -0.78
HMGCS1-204ENST00000507293 A0A1W2PR80 420 aa10.17□□□□□ -0.78
HMGCS1-204ENST00000507293 CIB4A0PJX0 185 aa10.17□□□□□ -0.78
HMGCS1-204ENST00000507293 GOLGA8OA6NCC3 632 aa10.17□□□□□ -0.78
HMGCS1-204ENST00000507293 E9PBE3 544 aa10.17□□□□□ -0.78
HMGCS1-204ENST00000507293 GOLGA8NF8WBI6 632 aa10.17□□□□□ -0.78
HMGCS1-204ENST00000507293 AP3D1O14617 1153 aa10.17□□□□□ -0.78
HMGCS1-204ENST00000507293 BIRC5O15392 142 aa10.17□□□□□ -0.78
HMGCS1-204ENST00000507293 RGS16O15492 202 aaPredicted RBP10.17□□□□□ -0.78
HMGCS1-204ENST00000507293 DNPH1O43598 174 aa10.17□□□□□ -0.78
HMGCS1-204ENST00000507293 THBS1P07996 1170 aa10.17□□□□□ -0.78
HMGCS1-204ENST00000507293 LBPP18428 481 aa10.17□□□□□ -0.78
HMGCS1-204ENST00000507293 BGNP21810 368 aa10.17□□□□□ -0.78
HMGCS1-204ENST00000507293 S100A3P33764 101 aa10.17□□□□□ -0.78
HMGCS1-204ENST00000507293 SLC1A6P48664 564 aa10.17□□□□□ -0.78
HMGCS1-204ENST00000507293 IDH2P48735 452 aaKnown RBP10.17□□□□□ -0.78
HMGCS1-204ENST00000507293 RPL14P50914 215 aaKnown RBP10.17□□□□□ -0.78
HMGCS1-204ENST00000507293 ZNF83P51522 516 aa10.17□□□□□ -0.78
HMGCS1-204ENST00000507293 CLNS1AP54105 237 aaKnown RBP10.17□□□□□ -0.78
HMGCS1-204ENST00000507293 NME5P56597 212 aa10.17□□□□□ -0.78
HMGCS1-204ENST00000507293 OR2B6P58173 313 aa10.17□□□□□ -0.78
HMGCS1-204ENST00000507293 KCNJ10P78508 379 aa10.17□□□□□ -0.78
HMGCS1-204ENST00000507293 CHRNEQ04844 493 aa10.17□□□□□ -0.78
HMGCS1-204ENST00000507293 SPOCK1Q08629 439 aa10.17□□□□□ -0.78
HMGCS1-204ENST00000507293 DPY19L1Q2PZI1 675 aa10.17□□□□□ -0.78
HMGCS1-204ENST00000507293 FAM174BQ3ZCQ3 159 aa10.17□□□□□ -0.78
HMGCS1-204ENST00000507293 DNM1P46Q6ZS02 220 aa10.17□□□□□ -0.78
HMGCS1-204ENST00000507293 SSX8Q7RTT4 187 aa10.17□□□□□ -0.78
HMGCS1-204ENST00000507293 ADGRG3Q86Y34 549 aa10.17□□□□□ -0.78
HMGCS1-204ENST00000507293 ANKFN1Q8N957 763 aa10.17□□□□□ -0.78
HMGCS1-204ENST00000507293 PIGXQ8TBF5 258 aa10.17□□□□□ -0.78
HMGCS1-204ENST00000507293 CNOT9Q92600 299 aaKnown RBP10.17□□□□□ -0.78
HMGCS1-204ENST00000507293 ZG16BQ96DA0 208 aa10.17□□□□□ -0.78
HMGCS1-204ENST00000507293 BARX1Q9HBU1 254 aaPredicted RBP10.17□□□□□ -0.78
HMGCS1-204ENST00000507293 EXOSC3Q9NQT5 275 aaKnown RBP10.17□□□□□ -0.78
HMGCS1-204ENST00000507293 FAIMQ9NVQ4 179 aa10.17□□□□□ -0.78
HMGCS1-204ENST00000507293 EPB41L3Q9Y2J2 1087 aaPredicted RBP10.17□□□□□ -0.78
HMGCS1-204ENST00000507293 HDGFL3Q9Y3E1 203 aa10.17□□□□□ -0.78
HMGCS1-204ENST00000507293 HEATR1Q9H583 2144 aaKnown RBP10.16□□□□□ -0.78
HMGCS1-204ENST00000507293 TMED7-TICAM2A0A0A6YYA0 188 aa10.16□□□□□ -0.78
HMGCS1-204ENST00000507293 CCT8L1PA6NM43 557 aa10.16□□□□□ -0.78
HMGCS1-204ENST00000507293 HMGN4O00479 90 aa10.16□□□□□ -0.78
HMGCS1-204ENST00000507293 GPR171O14626 319 aa10.16□□□□□ -0.78
HMGCS1-204ENST00000507293 TM9SF1O15321 606 aa10.16□□□□□ -0.78
HMGCS1-204ENST00000507293 MRPL33O75394 65 aaKnown RBP10.16□□□□□ -0.78
HMGCS1-204ENST00000507293 SNUPNO95149 360 aaKnown RBP10.16□□□□□ -0.78
HMGCS1-204ENST00000507293 TP53P04637 393 aaPredicted RBP10.16□□□□□ -0.78
HMGCS1-204ENST00000507293 DHRS4L1P0CG22 281 aa10.16□□□□□ -0.78
HMGCS1-204ENST00000507293 NTF4P34130 210 aa10.16□□□□□ -0.78
HMGCS1-204ENST00000507293 SLC16A1P53985 500 aa10.16□□□□□ -0.78
HMGCS1-204ENST00000507293 FOXG1P55316 489 aaPredicted RBP10.16□□□□□ -0.78
HMGCS1-204ENST00000507293 SYPL1Q16563 259 aa10.16□□□□□ -0.78
HMGCS1-204ENST00000507293 AGAP6Q5VW22 663 aa10.16□□□□□ -0.78
HMGCS1-204ENST00000507293 AP1ARQ63HQ0 302 aa10.16□□□□□ -0.78
HMGCS1-204ENST00000507293 WDR93Q6P2C0 686 aa10.16□□□□□ -0.78
HMGCS1-204ENST00000507293 TMEM108Q6UXF1 575 aa10.16□□□□□ -0.78
HMGCS1-204ENST00000507293 CASP12Q6UXS9 341 aa10.16□□□□□ -0.78
HMGCS1-204ENST00000507293 B3GLCTQ6Y288 498 aa10.16□□□□□ -0.78
HMGCS1-204ENST00000507293 RNF130Q86XS8 419 aa10.16□□□□□ -0.78
HMGCS1-204ENST00000507293 CCDC103Q8IW40 242 aa10.16□□□□□ -0.78
HMGCS1-204ENST00000507293 MREGQ8N565 214 aa10.16□□□□□ -0.78
HMGCS1-204ENST00000507293 TEX37Q96LM6 180 aa10.16□□□□□ -0.78
HMGCS1-204ENST00000507293 CCDC115Q96NT0 180 aa10.16□□□□□ -0.78
HMGCS1-204ENST00000507293 CACNG6Q9BXT2 260 aa10.16□□□□□ -0.78
HMGCS1-204ENST00000507293 GRIP2Q9C0E4 1043 aa10.16□□□□□ -0.78
HMGCS1-204ENST00000507293 SSU72Q9NP77 194 aaKnown RBP10.16□□□□□ -0.78
HMGCS1-204ENST00000507293 PNPOQ9NVS9 261 aa10.16□□□□□ -0.78
HMGCS1-204ENST00000507293 ASB6Q9NWX5 421 aa10.16□□□□□ -0.78
HMGCS1-204ENST00000507293 TAS2R16Q9NYV7 291 aa10.16□□□□□ -0.78
HMGCS1-204ENST00000507293 TMEM181Q9P2C4 612 aa10.16□□□□□ -0.78
HMGCS1-204ENST00000507293 MALT1Q9UDY8 824 aa10.16□□□□□ -0.78
HMGCS1-204ENST00000507293 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.16□□□□□ -0.78
HMGCS1-204ENST00000507293 BTNL2Q9UIR0 455 aa10.16□□□□□ -0.78
HMGCS1-204ENST00000507293 HAO1Q9UJM8 370 aa10.16□□□□□ -0.78
HMGCS1-204ENST00000507293 POU2F3Q9UKI9 436 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms