RNA–Protein interactions for RNA: ENST00000506767.1

TCOF1-210, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 869 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-210ENST00000506767 SRYQ05066 204 aa11.55□□□□□ -0.56
TCOF1-210ENST00000506767 EIF2S3LQ2VIR3 472 aaKnown RBP11.55□□□□□ -0.56
TCOF1-210ENST00000506767 TMEM176BQ3YBM2 270 aaPredicted RBP11.55□□□□□ -0.56
TCOF1-210ENST00000506767 SYT14P1Q58G82 188 aa11.55□□□□□ -0.56
TCOF1-210ENST00000506767 ALG10BQ5I7T1 473 aa11.55□□□□□ -0.56
TCOF1-210ENST00000506767 SWT1Q5T5J6 900 aaKnown RBP11.55□□□□□ -0.56
TCOF1-210ENST00000506767 RTL6Q6ICC9 239 aa11.55□□□□□ -0.56
TCOF1-210ENST00000506767 ZNF585AQ6P3V2 769 aa11.55□□□□□ -0.56
TCOF1-210ENST00000506767 POMZP3Q6PJE2 187 aa11.55□□□□□ -0.56
TCOF1-210ENST00000506767 ESPNLQ6ZVH7 1005 aa11.55□□□□□ -0.56
TCOF1-210ENST00000506767 UBQLNLQ8IYU4 475 aa11.55□□□□□ -0.56
TCOF1-210ENST00000506767 MEIOBQ8N635 442 aa11.55□□□□□ -0.56
TCOF1-210ENST00000506767 POP5Q969H6 163 aaKnown RBP11.55□□□□□ -0.56
TCOF1-210ENST00000506767 UTP4Q969X6 686 aaKnown RBP11.55□□□□□ -0.56
TCOF1-210ENST00000506767 RELTQ969Z4 430 aa11.55□□□□□ -0.56
TCOF1-210ENST00000506767 SLC47A1Q96FL8 570 aa11.55□□□□□ -0.56
TCOF1-210ENST00000506767 KLHL15Q96M94 604 aa11.55□□□□□ -0.56
TCOF1-210ENST00000506767 UCN2Q96RP3 112 aa11.55□□□□□ -0.56
TCOF1-210ENST00000506767 TUBA1CQ9BQE3 449 aa11.55□□□□□ -0.56
TCOF1-210ENST00000506767 TP63Q9H3D4 680 aaPredicted RBP11.55□□□□□ -0.56
TCOF1-210ENST00000506767 TMEM185BQ9H7F4 350 aa11.55□□□□□ -0.56
TCOF1-210ENST00000506767 RPS6KB2Q9UBS0 482 aa11.55□□□□□ -0.56
TCOF1-210ENST00000506767 TINAGQ9UJW2 476 aa11.55□□□□□ -0.56
TCOF1-210ENST00000506767 A4GNTQ9UNA3 340 aa11.55□□□□□ -0.56
TCOF1-210ENST00000506767 CAMK2AQ9UQM7 478 aa11.55□□□□□ -0.56
TCOF1-210ENST00000506767 SPIN1Q9Y657 262 aaPredicted RBP11.55□□□□□ -0.56
TCOF1-210ENST00000506767 SVILO95425 2214 aa11.55□□□□□ -0.56
TCOF1-210ENST00000506767 A0A087WUJ7 227 aa11.54□□□□□ -0.56
TCOF1-210ENST00000506767 TRAPPC13A5PLN9 417 aa11.54□□□□□ -0.56
TCOF1-210ENST00000506767 AQP12BA6NM10 295 aa11.54□□□□□ -0.56
TCOF1-210ENST00000506767 FIGNL2A6NMB9 653 aa11.54□□□□□ -0.56
TCOF1-210ENST00000506767 H0Y3Z8 333 aa11.54□□□□□ -0.56
TCOF1-210ENST00000506767 EIF1AYO14602 144 aaKnown RBP11.54□□□□□ -0.56
TCOF1-210ENST00000506767 FFAR1O14842 300 aa11.54□□□□□ -0.56
TCOF1-210ENST00000506767 SEC14L5O43304 696 aa11.54□□□□□ -0.56
TCOF1-210ENST00000506767 CHP2O43745 196 aa11.54□□□□□ -0.56
TCOF1-210ENST00000506767 NPIPB7O75200 414 aa11.54□□□□□ -0.56
TCOF1-210ENST00000506767 PRSS23O95084 383 aa11.54□□□□□ -0.56
TCOF1-210ENST00000506767 OR5F1O95221 314 aa11.54□□□□□ -0.56
TCOF1-210ENST00000506767 PNMTP11086 282 aa11.54□□□□□ -0.56
TCOF1-210ENST00000506767 CXCR1P25024 350 aa11.54□□□□□ -0.56
TCOF1-210ENST00000506767 ACVR2AP27037 513 aa11.54□□□□□ -0.56
TCOF1-210ENST00000506767 SFTPDP35247 375 aa11.54□□□□□ -0.56
TCOF1-210ENST00000506767 VLDLRP98155 873 aa11.54□□□□□ -0.56
TCOF1-210ENST00000506767 EGR4Q05215 589 aa11.54□□□□□ -0.56
TCOF1-210ENST00000506767 PIN1Q13526 163 aaPredicted RBP11.54□□□□□ -0.56
TCOF1-210ENST00000506767 DEF8Q6ZN54 512 aa11.54□□□□□ -0.56
TCOF1-210ENST00000506767 GDF7Q7Z4P5 450 aa11.54□□□□□ -0.56
TCOF1-210ENST00000506767 LSRQ86X29 649 aaPredicted RBP11.54□□□□□ -0.56
TCOF1-210ENST00000506767 AQP12AQ8IXF9 295 aa11.54□□□□□ -0.56
TCOF1-210ENST00000506767 ATP6V1C2Q8NEY4 427 aa11.54□□□□□ -0.56
TCOF1-210ENST00000506767 OR2V1Q8NHB1 315 aa11.54□□□□□ -0.56
TCOF1-210ENST00000506767 PRR7Q8TB68 274 aa11.54□□□□□ -0.56
TCOF1-210ENST00000506767 SMPDL3BQ92485 455 aa11.54□□□□□ -0.56
TCOF1-210ENST00000506767 PRRC1Q96M27 445 aa11.54□□□□□ -0.56
TCOF1-210ENST00000506767 PRSS27Q9BQR3 290 aa11.54□□□□□ -0.56
TCOF1-210ENST00000506767 POTEKPQ9BYX7 375 aa11.54□□□□□ -0.56
TCOF1-210ENST00000506767 COQ10BQ9H8M1 238 aa11.54□□□□□ -0.56
TCOF1-210ENST00000506767 NDUFAF4Q9P032 175 aa11.54□□□□□ -0.56
TCOF1-210ENST00000506767 RIMS3Q9UJD0 308 aa11.54□□□□□ -0.56
TCOF1-210ENST00000506767 FAM215AQ9Y5M1 114 aa11.54□□□□□ -0.56
TCOF1-210ENST00000506767 ENPP4Q9Y6X5 453 aa11.54□□□□□ -0.56
TCOF1-210ENST00000506767 IGKV1D-42A0A075B6H8 117 aa11.53□□□□□ -0.56
TCOF1-210ENST00000506767 TRGV8A0A0C4DH27 118 aa11.53□□□□□ -0.56
TCOF1-210ENST00000506767 ZC3H12DA2A288 527 aaKnown RBP11.53□□□□□ -0.56
TCOF1-210ENST00000506767 ELOA3DA6NLF2 546 aaPredicted RBP11.53□□□□□ -0.56
TCOF1-210ENST00000506767 A8MVM7 634 aa11.53□□□□□ -0.56
TCOF1-210ENST00000506767 KDM4EB2RXH2 506 aaPredicted RBP11.53□□□□□ -0.56
TCOF1-210ENST00000506767 E9PLN8 166 aa11.53□□□□□ -0.56
TCOF1-210ENST00000506767 J3KTA2 159 aa11.53□□□□□ -0.56
TCOF1-210ENST00000506767 TNFSF11O14788 317 aa11.53□□□□□ -0.56
TCOF1-210ENST00000506767 STAMBPO95630 424 aa11.53□□□□□ -0.56
TCOF1-210ENST00000506767 THRBP10828 461 aa11.53□□□□□ -0.56
TCOF1-210ENST00000506767 CCNA2P20248 432 aa11.53□□□□□ -0.56
TCOF1-210ENST00000506767 MAGEA2P43356 314 aa11.53□□□□□ -0.56
TCOF1-210ENST00000506767 CASP6P55212 293 aa11.53□□□□□ -0.56
TCOF1-210ENST00000506767 TAS2R41P59536 307 aa11.53□□□□□ -0.56
TCOF1-210ENST00000506767 RPS3AP61247 264 aaKnown RBP11.53□□□□□ -0.56
TCOF1-210ENST00000506767 FLOT2Q14254 428 aa11.53□□□□□ -0.56
TCOF1-210ENST00000506767 SF3B4Q15427 424 aaKnown RBP eCLIP11.53□□□□□ -0.56
TCOF1-210ENST00000506767 ELOA3BQ3SY89 546 aa11.53□□□□□ -0.56
TCOF1-210ENST00000506767 ACSF3Q4G176 576 aaPredicted RBP11.53□□□□□ -0.56
TCOF1-210ENST00000506767 PDSS1Q5T2R2 415 aa11.53□□□□□ -0.56
TCOF1-210ENST00000506767 C1orf185Q5T7R7 199 aa11.53□□□□□ -0.56
TCOF1-210ENST00000506767 C1QL3Q5VWW1 255 aa11.53□□□□□ -0.56
TCOF1-210ENST00000506767 NSUN5P2Q63ZY6 315 aa11.53□□□□□ -0.56
TCOF1-210ENST00000506767 HBMQ6B0K9 141 aa11.53□□□□□ -0.56
TCOF1-210ENST00000506767 WDR88Q6ZMY6 472 aa11.53□□□□□ -0.56
TCOF1-210ENST00000506767 TMPPEQ6ZT21 453 aa11.53□□□□□ -0.56
TCOF1-210ENST00000506767 SEM1Q6ZVN7 128 aa11.53□□□□□ -0.56
TCOF1-210ENST00000506767 PIWIL3Q7Z3Z3 882 aaKnown RBP11.53□□□□□ -0.56
TCOF1-210ENST00000506767 ELOA3Q8NG57 546 aa11.53□□□□□ -0.56
TCOF1-210ENST00000506767 OR10D3Q8NH80 312 aa11.53□□□□□ -0.56
TCOF1-210ENST00000506767 STK35Q8TDR2 534 aa11.53□□□□□ -0.56
TCOF1-210ENST00000506767 DDIT4LQ96D03 193 aa11.53□□□□□ -0.56
TCOF1-210ENST00000506767 SLC41A3Q96GZ6 507 aa11.53□□□□□ -0.56
TCOF1-210ENST00000506767 ZNF845Q96IR2 970 aaPredicted RBP11.53□□□□□ -0.56
TCOF1-210ENST00000506767 MPP4Q96JB8 637 aa11.53□□□□□ -0.56
TCOF1-210ENST00000506767 ARL5BQ96KC2 179 aa11.53□□□□□ -0.56
TCOF1-210ENST00000506767 LRGUKQ96M69 825 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms