RNA–Protein interactions for RNA: ENST00000506560.5

LIN54-206, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best) BASIC

Gene LIN54, Length 2,757 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-206ENST00000506560 KRCC1Q9NPI7 259 aaPredicted RBP11.15□□□□□ -0.62
LIN54-206ENST00000506560 AKIP1Q9NQ31 210 aa11.15□□□□□ -0.62
LIN54-206ENST00000506560 MRPS18AQ9NVS2 196 aaKnown RBP11.15□□□□□ -0.62
LIN54-206ENST00000506560 TOR4AQ9NXH8 423 aa11.15□□□□□ -0.62
LIN54-206ENST00000506560 RARRES3Q9UL19 164 aa11.15□□□□□ -0.62
LIN54-206ENST00000506560 EFCAB7A8K855 629 aa11.15□□□□□ -0.63
LIN54-206ENST00000506560 GTPBP1O00178 669 aaKnown RBP11.15□□□□□ -0.63
LIN54-206ENST00000506560 PLD2O14939 933 aa11.15□□□□□ -0.63
LIN54-206ENST00000506560 SERPINI2O75830 405 aa11.15□□□□□ -0.63
LIN54-206ENST00000506560 SOX30O94993 753 aa11.15□□□□□ -0.63
LIN54-206ENST00000506560 SLC1A3P43003 542 aa11.15□□□□□ -0.63
LIN54-206ENST00000506560 HCCSP53701 268 aa11.15□□□□□ -0.63
LIN54-206ENST00000506560 PSMD4P55036 377 aaKnown RBP11.15□□□□□ -0.63
LIN54-206ENST00000506560 CLDN6P56747 220 aa11.15□□□□□ -0.63
LIN54-206ENST00000506560 RPS25P62851 125 aaKnown RBP11.15□□□□□ -0.63
LIN54-206ENST00000506560 EGR4Q05215 589 aa11.15□□□□□ -0.63
LIN54-206ENST00000506560 C3orf38Q5JPI3 329 aa11.15□□□□□ -0.63
LIN54-206ENST00000506560 C1QL3Q5VWW1 255 aa11.15□□□□□ -0.63
LIN54-206ENST00000506560 SLITRK4Q8IW52 837 aa11.15□□□□□ -0.63
LIN54-206ENST00000506560 SYT14Q8NB59 555 aa11.15□□□□□ -0.63
LIN54-206ENST00000506560 ZNF485Q8NCK3 441 aa11.15□□□□□ -0.63
LIN54-206ENST00000506560 OR14A16Q8NHC5 309 aa11.15□□□□□ -0.63
LIN54-206ENST00000506560 SECISBP2Q96T21 854 aaKnown RBP11.15□□□□□ -0.63
LIN54-206ENST00000506560 TIMP4Q99727 224 aa11.15□□□□□ -0.63
LIN54-206ENST00000506560 QPCTLQ9NXS2 382 aa11.15□□□□□ -0.63
LIN54-206ENST00000506560 ZNF346Q9UL40 294 aaKnown RBP11.15□□□□□ -0.63
LIN54-206ENST00000506560 HRH3Q9Y5N1 445 aa11.15□□□□□ -0.63
LIN54-206ENST00000506560 ZNF264O43296 627 aa11.14□□□□□ -0.63
LIN54-206ENST00000506560 HCRTR2O43614 444 aa11.14□□□□□ -0.63
LIN54-206ENST00000506560 DYRK3O43781 588 aa11.14□□□□□ -0.63
LIN54-206ENST00000506560 TSPAN2O60636 221 aa11.14□□□□□ -0.63
LIN54-206ENST00000506560 RCBTB2O95199 551 aa11.14□□□□□ -0.63
LIN54-206ENST00000506560 MYL12AP19105 171 aa11.14□□□□□ -0.63
LIN54-206ENST00000506560 IL12BP29460 328 aa11.14□□□□□ -0.63
LIN54-206ENST00000506560 HTR1FP30939 366 aa11.14□□□□□ -0.63
LIN54-206ENST00000506560 COPZ1P61923 177 aa11.14□□□□□ -0.63
LIN54-206ENST00000506560 IFITM3Q01628 133 aa11.14□□□□□ -0.63
LIN54-206ENST00000506560 ACY1Q03154 408 aa11.14□□□□□ -0.63
LIN54-206ENST00000506560 LTBQ06643 244 aa11.14□□□□□ -0.63
LIN54-206ENST00000506560 ITGADQ13349 1161 aa11.14□□□□□ -0.63
LIN54-206ENST00000506560 ATP1A4Q13733 1029 aa11.14□□□□□ -0.63
LIN54-206ENST00000506560 KLHL22Q53GT1 634 aa11.14□□□□□ -0.63
LIN54-206ENST00000506560 PEAR1Q5VY43 1037 aaPredicted RBP11.14□□□□□ -0.63
LIN54-206ENST00000506560 HLA-DQA1Q5Y7H0 255 aa11.14□□□□□ -0.63
LIN54-206ENST00000506560 LYPD4Q6UWN0 246 aa11.14□□□□□ -0.63
LIN54-206ENST00000506560 ANKRD37Q7Z713 158 aa11.14□□□□□ -0.63
LIN54-206ENST00000506560 MFSD4AQ8N468 514 aa11.14□□□□□ -0.63
LIN54-206ENST00000506560 RFLNBQ8N5W9 214 aa11.14□□□□□ -0.63
LIN54-206ENST00000506560 ZNF441Q8N8Z8 693 aa11.14□□□□□ -0.63
LIN54-206ENST00000506560 OR6Q1Q8NGQ2 317 aa11.14□□□□□ -0.63
LIN54-206ENST00000506560 MOSPD2Q8NHP6 518 aa11.14□□□□□ -0.63
LIN54-206ENST00000506560 MCFD2Q8NI22 146 aa11.14□□□□□ -0.63
LIN54-206ENST00000506560 ERMAPQ96PL5 475 aaPredicted RBP11.14□□□□□ -0.63
LIN54-206ENST00000506560 C6orf62Q9GZU0 229 aaPredicted RBP11.14□□□□□ -0.63
LIN54-206ENST00000506560 KLHL1Q9NR64 748 aa11.14□□□□□ -0.63
LIN54-206ENST00000506560 CMC2Q9NRP2 79 aa11.14□□□□□ -0.63
LIN54-206ENST00000506560 CCDC182A6NF36 153 aa11.14□□□□□ -0.63
LIN54-206ENST00000506560 METTL15A6NJ78 407 aa11.14□□□□□ -0.63
LIN54-206ENST00000506560 TOX3O15405 576 aaPredicted RBP11.14□□□□□ -0.63
LIN54-206ENST00000506560 MAGEB4O15481 346 aaPredicted RBP11.14□□□□□ -0.63
LIN54-206ENST00000506560 HCN1O60741 890 aa11.14□□□□□ -0.63
LIN54-206ENST00000506560 HMGN1P05114 100 aa11.14□□□□□ -0.63
LIN54-206ENST00000506560 ANKRD34CP0C6C1 535 aa11.14□□□□□ -0.63
LIN54-206ENST00000506560 IMPDH2P12268 514 aa11.14□□□□□ -0.63
LIN54-206ENST00000506560 HIST1H1CP16403 213 aaKnown RBP11.14□□□□□ -0.63
LIN54-206ENST00000506560 ATP6V1E1P36543 226 aa11.14□□□□□ -0.63
LIN54-206ENST00000506560 WNT4P56705 351 aa11.14□□□□□ -0.63
LIN54-206ENST00000506560 RPS7P62081 194 aaKnown RBP11.14□□□□□ -0.63
LIN54-206ENST00000506560 SQSTM1Q13501 440 aa11.14□□□□□ -0.63
LIN54-206ENST00000506560 BICRALQ6AI39 1079 aa11.14□□□□□ -0.63
LIN54-206ENST00000506560 ATG4DQ86TL0 474 aaPredicted RBP11.14□□□□□ -0.63
LIN54-206ENST00000506560 CMIPQ8IY22 773 aa11.14□□□□□ -0.63
LIN54-206ENST00000506560 PLPP5Q8NEB5 264 aa11.14□□□□□ -0.63
LIN54-206ENST00000506560 SGTBQ96EQ0 304 aa11.14□□□□□ -0.63
LIN54-206ENST00000506560 TBCCD1Q9NVR7 557 aa11.14□□□□□ -0.63
LIN54-206ENST00000506560 COPS7AQ9UBW8 275 aa11.14□□□□□ -0.63
LIN54-206ENST00000506560 SEC14L4Q9UDX3 406 aa11.14□□□□□ -0.63
LIN54-206ENST00000506560 SRPK3Q9UPE1 567 aa11.14□□□□□ -0.63
LIN54-206ENST00000506560 TMEM5Q9Y2B1 443 aa11.14□□□□□ -0.63
LIN54-206ENST00000506560 SLC35A3Q9Y2D2 325 aa11.14□□□□□ -0.63
LIN54-206ENST00000506560 IER3IP1Q9Y5U9 82 aa11.14□□□□□ -0.63
LIN54-206ENST00000506560 IGLV3-12A0A075B6K2 115 aa11.13□□□□□ -0.63
LIN54-206ENST00000506560 ADAM10O14672 748 aa11.13□□□□□ -0.63
LIN54-206ENST00000506560 ATP6V1G1O75348 118 aa11.13□□□□□ -0.63
LIN54-206ENST00000506560 HEXBP07686 556 aa11.13□□□□□ -0.63
LIN54-206ENST00000506560 CLEC2LP0C7M8 214 aa11.13□□□□□ -0.63
LIN54-206ENST00000506560 RNF4P78317 190 aa11.13□□□□□ -0.63
LIN54-206ENST00000506560 MXD1Q05195 221 aa11.13□□□□□ -0.63
LIN54-206ENST00000506560 MLLT11Q13015 90 aaPredicted RBP11.13□□□□□ -0.63
LIN54-206ENST00000506560 C16orf87Q6PH81 154 aa11.13□□□□□ -0.63
LIN54-206ENST00000506560 DCDC5Q6ZRR9 648 aa11.13□□□□□ -0.63
LIN54-206ENST00000506560 OR52E2Q8NGJ4 325 aa11.13□□□□□ -0.63
LIN54-206ENST00000506560 SPRYD4Q8WW59 207 aaPredicted RBP11.13□□□□□ -0.63
LIN54-206ENST00000506560 RASD2Q96D21 266 aa11.13□□□□□ -0.63
LIN54-206ENST00000506560 KTI12Q96EK9 354 aaPredicted RBP11.13□□□□□ -0.63
LIN54-206ENST00000506560 ZC3H10Q96K80 434 aaKnown RBP11.13□□□□□ -0.63
LIN54-206ENST00000506560 GFM1Q96RP9 751 aaKnown RBP11.13□□□□□ -0.63
LIN54-206ENST00000506560 SPSB2Q99619 263 aa11.13□□□□□ -0.63
LIN54-206ENST00000506560 WDR77Q9BQA1 342 aaPredicted RBP11.13□□□□□ -0.63
LIN54-206ENST00000506560 PRRG3Q9BZD7 231 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms