RNA–Protein interactions for RNA: ENST00000505728.1

COL4A5-208, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 3

Gene COL4A5, Length 537 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-208ENST00000505728 RFPL3O75679 317 aa7.36□□□□□ -1.23
COL4A5-208ENST00000505728 NADKO95544 446 aaPredicted RBP7.36□□□□□ -1.23
COL4A5-208ENST00000505728 FADS2O95864 444 aaKnown RBP7.36□□□□□ -1.23
COL4A5-208ENST00000505728 DBTP11182 482 aaKnown RBP7.36□□□□□ -1.23
COL4A5-208ENST00000505728 CDK4P11802 303 aa7.36□□□□□ -1.23
COL4A5-208ENST00000505728 ZNF28P17035 718 aa7.36□□□□□ -1.23
COL4A5-208ENST00000505728 PGCP20142 388 aa7.36□□□□□ -1.23
COL4A5-208ENST00000505728 C21orf33P30042 268 aaPredicted RBP7.36□□□□□ -1.23
COL4A5-208ENST00000505728 SLC1A3P43003 542 aa7.36□□□□□ -1.23
COL4A5-208ENST00000505728 CRYZQ08257 329 aaKnown RBP7.36□□□□□ -1.23
COL4A5-208ENST00000505728 TMED1Q13445 227 aa7.36□□□□□ -1.23
COL4A5-208ENST00000505728 LSAMPQ13449 338 aa7.36□□□□□ -1.23
COL4A5-208ENST00000505728 EXT1Q16394 746 aa7.36□□□□□ -1.23
COL4A5-208ENST00000505728 ISXQ2M1V0 245 aa7.36□□□□□ -1.23
COL4A5-208ENST00000505728 NDUFAF6Q330K2 333 aa7.36□□□□□ -1.23
COL4A5-208ENST00000505728 ELOA3BQ3SY89 546 aa7.36□□□□□ -1.23
COL4A5-208ENST00000505728 ANKDD1AQ495B1 522 aa7.36□□□□□ -1.23
COL4A5-208ENST00000505728 SYT14P1Q58G82 188 aa7.36□□□□□ -1.23
COL4A5-208ENST00000505728 SMARCD3Q6STE5 483 aa7.36□□□□□ -1.23
COL4A5-208ENST00000505728 FAM198BQ6UWH4 519 aa7.36□□□□□ -1.23
COL4A5-208ENST00000505728 CCDC81Q6ZN84 652 aa7.36□□□□□ -1.23
COL4A5-208ENST00000505728 ATG4DQ86TL0 474 aaPredicted RBP7.36□□□□□ -1.23
COL4A5-208ENST00000505728 OAFQ86UD1 273 aa7.36□□□□□ -1.23
COL4A5-208ENST00000505728 MARCH3Q86UD3 253 aa7.36□□□□□ -1.23
COL4A5-208ENST00000505728 LNX2Q8N448 690 aa7.36□□□□□ -1.23
COL4A5-208ENST00000505728 GATSQ8NAP1 163 aa7.36□□□□□ -1.23
COL4A5-208ENST00000505728 ANKK1Q8NFD2 765 aa7.36□□□□□ -1.23
COL4A5-208ENST00000505728 ELOA3Q8NG57 546 aa7.36□□□□□ -1.23
COL4A5-208ENST00000505728 OR5W2Q8NH69 310 aa7.36□□□□□ -1.23
COL4A5-208ENST00000505728 ZNF563Q8TA94 476 aa7.36□□□□□ -1.23
COL4A5-208ENST00000505728 M1APQ8TC57 530 aa7.36□□□□□ -1.23
COL4A5-208ENST00000505728 FANK1Q8TC84 345 aa7.36□□□□□ -1.23
COL4A5-208ENST00000505728 RNF138Q8WVD3 245 aa7.36□□□□□ -1.23
COL4A5-208ENST00000505728 LIPHQ8WWY8 451 aa7.36□□□□□ -1.23
COL4A5-208ENST00000505728 HGDQ93099 445 aa7.36□□□□□ -1.23
COL4A5-208ENST00000505728 RFKQ969G6 155 aa7.36□□□□□ -1.23
COL4A5-208ENST00000505728 YIPF6Q96EC8 236 aa7.36□□□□□ -1.23
COL4A5-208ENST00000505728 ARSGQ96EG1 525 aa7.36□□□□□ -1.23
COL4A5-208ENST00000505728 RNF31Q96EP0 1072 aa7.36□□□□□ -1.23
COL4A5-208ENST00000505728 LRR1Q96L50 414 aa7.36□□□□□ -1.23
COL4A5-208ENST00000505728 RHNO1Q9BSD3 238 aa7.36□□□□□ -1.23
COL4A5-208ENST00000505728 DDA1Q9BW61 102 aa7.36□□□□□ -1.23
COL4A5-208ENST00000505728 TBL1XR1Q9BZK7 514 aa7.36□□□□□ -1.23
COL4A5-208ENST00000505728 ULBP3Q9BZM4 244 aa7.36□□□□□ -1.23
COL4A5-208ENST00000505728 ADAM19Q9H013 955 aa7.36□□□□□ -1.23
COL4A5-208ENST00000505728 ZNF700Q9H0M5 742 aa7.36□□□□□ -1.23
COL4A5-208ENST00000505728 AKIRIN1Q9H9L7 192 aaPredicted RBP7.36□□□□□ -1.23
COL4A5-208ENST00000505728 FGF20Q9NP95 211 aaPredicted RBP7.36□□□□□ -1.23
COL4A5-208ENST00000505728 GPR83Q9NYM4 423 aa7.36□□□□□ -1.23
COL4A5-208ENST00000505728 DNAJC27Q9NZQ0 273 aa7.36□□□□□ -1.23
COL4A5-208ENST00000505728 WARS2Q9UGM6 360 aaKnown RBP7.36□□□□□ -1.23
COL4A5-208ENST00000505728 PADI1Q9ULC6 663 aa7.36□□□□□ -1.23
COL4A5-208ENST00000505728 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP7.36□□□□□ -1.23
COL4A5-208ENST00000505728 PTRH2Q9Y3E5 179 aaKnown RBP7.36□□□□□ -1.23
COL4A5-208ENST00000505728 ZNF337Q9Y3M9 751 aa7.36□□□□□ -1.23
COL4A5-208ENST00000505728 EXPH5Q8NEV8 1989 aa7.36□□□□□ -1.23
COL4A5-208ENST00000505728 CNTRLQ7Z7A1 2325 aa7.35□□□□□ -1.23
COL4A5-208ENST00000505728 ALPK2Q86TB3 2170 aa7.35□□□□□ -1.23
COL4A5-208ENST00000505728 TMEM200CA6NKL6 621 aa7.35□□□□□ -1.23
COL4A5-208ENST00000505728 ENO4A6NNW6 628 aa7.35□□□□□ -1.23
COL4A5-208ENST00000505728 BHLHE40O14503 412 aa7.35□□□□□ -1.23
COL4A5-208ENST00000505728 HCRTR2O43614 444 aa7.35□□□□□ -1.23
COL4A5-208ENST00000505728 AHCYL1O43865 530 aa7.35□□□□□ -1.23
COL4A5-208ENST00000505728 MAN1A2O60476 641 aa7.35□□□□□ -1.23
COL4A5-208ENST00000505728 CDC40O60508 579 aaKnown RBP eCLIP7.35□□□□□ -1.23
COL4A5-208ENST00000505728 OR7A10O76100 309 aa7.35□□□□□ -1.23
COL4A5-208ENST00000505728 NDUFB2O95178 105 aa7.35□□□□□ -1.23
COL4A5-208ENST00000505728 MT-CO3P00414 261 aa7.35□□□□□ -1.23
COL4A5-208ENST00000505728 LCKP06239 509 aa7.35□□□□□ -1.23
COL4A5-208ENST00000505728 RAB40ALP0C0E4 278 aa7.35□□□□□ -1.23
COL4A5-208ENST00000505728 SAGP10523 405 aaPredicted RBP7.35□□□□□ -1.23
COL4A5-208ENST00000505728 GP1BBP13224 206 aa7.35□□□□□ -1.23
COL4A5-208ENST00000505728 HK1P19367 917 aa7.35□□□□□ -1.23
COL4A5-208ENST00000505728 FUT1P19526 365 aa7.35□□□□□ -1.23
COL4A5-208ENST00000505728 CCNA2P20248 432 aa7.35□□□□□ -1.23
COL4A5-208ENST00000505728 PSMB9P28065 219 aa7.35□□□□□ -1.23
COL4A5-208ENST00000505728 SLC6A6P31641 620 aa7.35□□□□□ -1.23
COL4A5-208ENST00000505728 EVI2BP34910 448 aa7.35□□□□□ -1.23
COL4A5-208ENST00000505728 FOLR3P41439 243 aa7.35□□□□□ -1.23
COL4A5-208ENST00000505728 TMED10P49755 219 aaKnown RBP7.35□□□□□ -1.23
COL4A5-208ENST00000505728 P2RX1P51575 399 aa7.35□□□□□ -1.23
COL4A5-208ENST00000505728 CCR4P51679 360 aa7.35□□□□□ -1.23
COL4A5-208ENST00000505728 SUMO3P55854 103 aaPredicted RBP7.35□□□□□ -1.23
COL4A5-208ENST00000505728 FOXL2P58012 376 aa7.35□□□□□ -1.23
COL4A5-208ENST00000505728 FXYD6P3P58550 94 aa7.35□□□□□ -1.23
COL4A5-208ENST00000505728 INSM1Q01101 510 aaPredicted RBP7.35□□□□□ -1.23
COL4A5-208ENST00000505728 ZNF91Q05481 1191 aa7.35□□□□□ -1.23
COL4A5-208ENST00000505728 RAB40BQ12829 278 aa7.35□□□□□ -1.23
COL4A5-208ENST00000505728 EIF3IQ13347 325 aaKnown RBP7.35□□□□□ -1.23
COL4A5-208ENST00000505728 CBFBQ13951 182 aa7.35□□□□□ -1.23
COL4A5-208ENST00000505728 PCOLCEQ15113 449 aa7.35□□□□□ -1.23
COL4A5-208ENST00000505728 CLEC12AQ5QGZ9 265 aa7.35□□□□□ -1.23
COL4A5-208ENST00000505728 AADACL4Q5VUY2 407 aa7.35□□□□□ -1.23
COL4A5-208ENST00000505728 NXNL2Q5VZ03 156 aa7.35□□□□□ -1.23
COL4A5-208ENST00000505728 SLC30A6Q6NXT4 461 aa7.35□□□□□ -1.23
COL4A5-208ENST00000505728 FAM199XQ6PEV8 388 aaPredicted RBP7.35□□□□□ -1.23
COL4A5-208ENST00000505728 CBLN3Q6UW01 205 aa7.35□□□□□ -1.23
COL4A5-208ENST00000505728 C6orf15Q6UXA7 325 aaPredicted RBP7.35□□□□□ -1.23
COL4A5-208ENST00000505728 RAB11FIP2Q7L804 512 aa7.35□□□□□ -1.23
COL4A5-208ENST00000505728 ZNF367Q7RTV3 350 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms