RNA–Protein interactions for RNA: ENST00000505657.1

CHD1-203, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 3

Gene CHD1, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-203ENST00000505657 HNRNPA2B1P22626 353 aaKnown RBP2.39□□□□□ -2.03
CHD1-203ENST00000505657 PAX7P23759 505 aa2.39□□□□□ -2.03
CHD1-203ENST00000505657 PRPHP41219 470 aa2.39□□□□□ -2.03
CHD1-203ENST00000505657 PPOXP50336 477 aa2.39□□□□□ -2.03
CHD1-203ENST00000505657 ARFIP1P53367 373 aa2.39□□□□□ -2.03
CHD1-203ENST00000505657 PLA2G16P53816 162 aa2.39□□□□□ -2.03
CHD1-203ENST00000505657 CNTN2Q02246 1040 aa2.39□□□□□ -2.03
CHD1-203ENST00000505657 CHRNB3Q05901 458 aa2.39□□□□□ -2.03
CHD1-203ENST00000505657 NSDHLQ15738 373 aa2.39□□□□□ -2.03
CHD1-203ENST00000505657 RABGAP1LQ5R372 815 aa2.39□□□□□ -2.03
CHD1-203ENST00000505657 GPRC6AQ5T6X5 926 aa2.39□□□□□ -2.03
CHD1-203ENST00000505657 BLOC1S2Q6QNY1 142 aa2.39□□□□□ -2.03
CHD1-203ENST00000505657 IGFL3Q6UXB1 125 aa2.39□□□□□ -2.03
CHD1-203ENST00000505657 RNF165Q6ZSG1 346 aa2.39□□□□□ -2.03
CHD1-203ENST00000505657 ACOT7LQ6ZUV0 252 aa2.39□□□□□ -2.03
CHD1-203ENST00000505657 LRRC43Q8N309 656 aa2.39□□□□□ -2.03
CHD1-203ENST00000505657 SVOPLQ8N434 492 aa2.39□□□□□ -2.03
CHD1-203ENST00000505657 FAM151AQ8WW52 585 aa2.39□□□□□ -2.03
CHD1-203ENST00000505657 OSTF1Q92882 214 aa2.39□□□□□ -2.03
CHD1-203ENST00000505657 POLR2J2Q9GZM3 115 aaKnown RBP2.39□□□□□ -2.03
CHD1-203ENST00000505657 RAB33BQ9H082 229 aa2.39□□□□□ -2.03
CHD1-203ENST00000505657 POLR2J3Q9H1A7 115 aaKnown RBP2.39□□□□□ -2.03
CHD1-203ENST00000505657 FARSBQ9NSD9 589 aaKnown RBP2.39□□□□□ -2.03
CHD1-203ENST00000505657 AIG1Q9NVV5 245 aa2.39□□□□□ -2.03
CHD1-203ENST00000505657 GNG12Q9UBI6 72 aa2.39□□□□□ -2.03
CHD1-203ENST00000505657 BTNL2Q9UIR0 455 aa2.39□□□□□ -2.03
CHD1-203ENST00000505657 ZNF225Q9UK10 706 aa2.39□□□□□ -2.03
CHD1-203ENST00000505657 NEUROG3Q9Y4Z2 214 aa2.39□□□□□ -2.03
CHD1-203ENST00000505657 WSB1Q9Y6I7 421 aa2.39□□□□□ -2.03
CHD1-203ENST00000505657 ZNFX1Q9P2E3 1918 aaKnown RBP2.38□□□□□ -2.03
CHD1-203ENST00000505657 KRTAP4-16G5E9R7 235 aaPredicted RBP2.38□□□□□ -2.03
CHD1-203ENST00000505657 XPO1O14980 1071 aaKnown RBP2.38□□□□□ -2.03
CHD1-203ENST00000505657 ZSCAN12O43309 604 aa2.38□□□□□ -2.03
CHD1-203ENST00000505657 HCRTR1O43613 425 aa2.38□□□□□ -2.03
CHD1-203ENST00000505657 GMFGO60234 142 aa2.38□□□□□ -2.03
CHD1-203ENST00000505657 ECI2O75521 394 aa2.38□□□□□ -2.03
CHD1-203ENST00000505657 IDH1O75874 414 aaKnown RBP2.38□□□□□ -2.03
CHD1-203ENST00000505657 UFL1O94874 794 aa2.38□□□□□ -2.03
CHD1-203ENST00000505657 SNAPINO95295 136 aa2.38□□□□□ -2.03
CHD1-203ENST00000505657 LGI1O95970 557 aa2.38□□□□□ -2.03
CHD1-203ENST00000505657 NT5EP21589 574 aa2.38□□□□□ -2.03
CHD1-203ENST00000505657 KLK7P49862 253 aa2.38□□□□□ -2.03
CHD1-203ENST00000505657 HNMTP50135 292 aa2.38□□□□□ -2.03
CHD1-203ENST00000505657 PRPS1P60891 318 aa2.38□□□□□ -2.03
CHD1-203ENST00000505657 RPS14P62263 151 aaKnown RBP2.38□□□□□ -2.03
CHD1-203ENST00000505657 PJVKQ0ZLH3 352 aa2.38□□□□□ -2.03
CHD1-203ENST00000505657 EBI3Q14213 229 aa2.38□□□□□ -2.03
CHD1-203ENST00000505657 MXD4Q14582 209 aaPredicted RBP2.38□□□□□ -2.03
CHD1-203ENST00000505657 SYPL1Q16563 259 aa2.38□□□□□ -2.03
CHD1-203ENST00000505657 C1orf146Q5VVC0 180 aa2.38□□□□□ -2.03
CHD1-203ENST00000505657 ATL3Q6DD88 541 aa2.38□□□□□ -2.03
CHD1-203ENST00000505657 ACP7Q6ZNF0 438 aa2.38□□□□□ -2.03
CHD1-203ENST00000505657 PPP1R42Q7Z4L9 355 aa2.38□□□□□ -2.03
CHD1-203ENST00000505657 TPRA1Q86W33 373 aa2.38□□□□□ -2.03
CHD1-203ENST00000505657 ZDHHC21Q8IVQ6 265 aa2.38□□□□□ -2.03
CHD1-203ENST00000505657 FAM71E2Q8N5Q1 922 aa2.38□□□□□ -2.03
CHD1-203ENST00000505657 CATSPER1Q8NEC5 780 aa2.38□□□□□ -2.03
CHD1-203ENST00000505657 DNAJA4Q8WW22 397 aaPredicted RBP2.38□□□□□ -2.03
CHD1-203ENST00000505657 FAM3CQ92520 227 aa2.38□□□□□ -2.03
CHD1-203ENST00000505657 RPL3LQ92901 407 aaKnown RBP2.38□□□□□ -2.03
CHD1-203ENST00000505657 SPATA16Q9BXB7 569 aa2.38□□□□□ -2.03
CHD1-203ENST00000505657 NAT10Q9H0A0 1025 aaKnown RBP2.38□□□□□ -2.03
CHD1-203ENST00000505657 ZNF385DQ9H6B1 395 aa2.38□□□□□ -2.03
CHD1-203ENST00000505657 MTRF1LQ9UGC7 380 aaKnown RBP2.38□□□□□ -2.03
CHD1-203ENST00000505657 KIF25Q9UIL4 384 aa2.38□□□□□ -2.03
CHD1-203ENST00000505657 ERVW-1Q9UQF0 538 aa2.38□□□□□ -2.03
CHD1-203ENST00000505657 SF3B1O75533 1304 aaKnown RBP eCLIP2.38□□□□□ -2.032e-6■■■■■ 89.1
CHD1-203ENST00000505657 FRMPD3Q5JV73 1810 aa2.38□□□□□ -2.03
CHD1-203ENST00000505657 MYO10Q9HD67 2058 aa2.37□□□□□ -2.03
CHD1-203ENST00000505657 IGKV1D-8A0A087WSZ0 117 aa2.37□□□□□ -2.03
CHD1-203ENST00000505657 TRBV6-6A0A0A6YYG2 114 aa2.37□□□□□ -2.03
CHD1-203ENST00000505657 A0A0G2JLM5 398 aa2.37□□□□□ -2.03
CHD1-203ENST00000505657 GJE1A6NN92 205 aa2.37□□□□□ -2.03
CHD1-203ENST00000505657 FAM166BA8MTA8 275 aa2.37□□□□□ -2.03
CHD1-203ENST00000505657 A8MUI8 341 aa2.37□□□□□ -2.03
CHD1-203ENST00000505657 GPR89AB7ZAQ6 455 aa2.37□□□□□ -2.03
CHD1-203ENST00000505657 ANGPT2O15123 496 aa2.37□□□□□ -2.03
CHD1-203ENST00000505657 FAM189A1O60320 539 aa2.37□□□□□ -2.03
CHD1-203ENST00000505657 OR10H3O60404 316 aa2.37□□□□□ -2.03
CHD1-203ENST00000505657 KLF8O95600 359 aaPredicted RBP2.37□□□□□ -2.03
CHD1-203ENST00000505657 MOSP00540 346 aa2.37□□□□□ -2.03
CHD1-203ENST00000505657 UGT2B4P06133 528 aa2.37□□□□□ -2.03
CHD1-203ENST00000505657 GPR89BP0CG08 455 aa2.37□□□□□ -2.03
CHD1-203ENST00000505657 RPA2P15927 270 aa2.37□□□□□ -2.03
CHD1-203ENST00000505657 ATP6V1B2P21281 511 aa2.37□□□□□ -2.03
CHD1-203ENST00000505657 COX7A1P24310 79 aa2.37□□□□□ -2.03
CHD1-203ENST00000505657 CCNCP24863 283 aa2.37□□□□□ -2.03
CHD1-203ENST00000505657 PSMA2P25787 234 aa2.37□□□□□ -2.03
CHD1-203ENST00000505657 CA8P35219 290 aa2.37□□□□□ -2.03
CHD1-203ENST00000505657 PLK1P53350 603 aa2.37□□□□□ -2.03
CHD1-203ENST00000505657 SLC36A3Q495N2 470 aa2.37□□□□□ -2.03
CHD1-203ENST00000505657 GGTA1PQ4G0N0 100 aa2.37□□□□□ -2.03
CHD1-203ENST00000505657 TFDP3Q5H9I0 405 aa2.37□□□□□ -2.03
CHD1-203ENST00000505657 KLF17Q5JT82 389 aaPredicted RBP2.37□□□□□ -2.03
CHD1-203ENST00000505657 CCDC137Q6PK04 289 aaKnown RBP2.37□□□□□ -2.03
CHD1-203ENST00000505657 RGS9BPQ6ZS82 235 aa2.37□□□□□ -2.03
CHD1-203ENST00000505657 C6orf223Q8N319 242 aa2.37□□□□□ -2.03
CHD1-203ENST00000505657 NKAPP1Q8N9T2 125 aa2.37□□□□□ -2.03
CHD1-203ENST00000505657 RAPGEF5Q92565 580 aa2.37□□□□□ -2.03
CHD1-203ENST00000505657 GPA33Q99795 319 aa2.37□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms