RNA–Protein interactions for RNA: ENST00000504788.5

LMNB1-208, Transcript of lamin B1, humanhuman

TSL 2

Gene LMNB1, Length 1,801 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-208ENST00000504788 CPT1CQ8TCG5 803 aa4.44□□□□□ -1.7
LMNB1-208ENST00000504788 PRRC1Q96M27 445 aa4.44□□□□□ -1.7
LMNB1-208ENST00000504788 MCHR1Q99705 422 aa4.44□□□□□ -1.7
LMNB1-208ENST00000504788 REPIN1Q9BWE0 567 aaKnown RBP4.44□□□□□ -1.7
LMNB1-208ENST00000504788 MAGIXQ9H6Y5 334 aa4.44□□□□□ -1.7
LMNB1-208ENST00000504788 CTPS2Q9NRF8 586 aa4.44□□□□□ -1.7
LMNB1-208ENST00000504788 CCM2LQ9NUG4 571 aaPredicted RBP4.44□□□□□ -1.7
LMNB1-208ENST00000504788 BAG5Q9UL15 447 aa4.44□□□□□ -1.7
LMNB1-208ENST00000504788 NPIPA1Q9UND3 350 aa4.44□□□□□ -1.7
LMNB1-208ENST00000504788 ZNF232Q9UNY5 417 aa4.44□□□□□ -1.7
LMNB1-208ENST00000504788 SAMD4AQ9UPU9 718 aaKnown RBP4.44□□□□□ -1.7
LMNB1-208ENST00000504788 FAM215AQ9Y5M1 114 aa4.44□□□□□ -1.7
LMNB1-208ENST00000504788 ENPP4Q9Y6X5 453 aa4.44□□□□□ -1.7
LMNB1-208ENST00000504788 UTP20O75691 2785 aaKnown RBP4.44□□□□□ -1.7
LMNB1-208ENST00000504788 NBPF19A0A087WUL8 3843 aa4.44□□□□□ -1.7
LMNB1-208ENST00000504788 A0A087WUU8 490 aa4.44□□□□□ -1.7
LMNB1-208ENST00000504788 TRGV5A0A0B4J1U4 118 aa4.44□□□□□ -1.7
LMNB1-208ENST00000504788 TMEM72A0PK05 275 aa4.44□□□□□ -1.7
LMNB1-208ENST00000504788 OR14I1A6ND48 311 aa4.44□□□□□ -1.7
LMNB1-208ENST00000504788 TTLL8A6PVC2 850 aa4.44□□□□□ -1.7
LMNB1-208ENST00000504788 TFECO14948 347 aaPredicted RBP4.44□□□□□ -1.7
LMNB1-208ENST00000504788 KLF4O43474 513 aa4.44□□□□□ -1.7
LMNB1-208ENST00000504788 CHP2O43745 196 aa4.44□□□□□ -1.7
LMNB1-208ENST00000504788 ENTPD5O75356 428 aa4.44□□□□□ -1.7
LMNB1-208ENST00000504788 DIRAS1O95057 198 aa4.44□□□□□ -1.7
LMNB1-208ENST00000504788 ACTL6AO96019 429 aa4.44□□□□□ -1.7
LMNB1-208ENST00000504788 IGF2P01344 180 aa4.44□□□□□ -1.7
LMNB1-208ENST00000504788 CRYABP02511 175 aaKnown RBP4.44□□□□□ -1.7
LMNB1-208ENST00000504788 ZNF26P17031 533 aaPredicted RBP4.44□□□□□ -1.7
LMNB1-208ENST00000504788 HK1P19367 917 aa4.44□□□□□ -1.7
LMNB1-208ENST00000504788 NTF4P34130 210 aa4.44□□□□□ -1.7
LMNB1-208ENST00000504788 APOBEC1P41238 236 aaKnown RBP4.44□□□□□ -1.7
LMNB1-208ENST00000504788 EIF1P41567 113 aaKnown RBP4.44□□□□□ -1.7
LMNB1-208ENST00000504788 CLK3P49761 638 aaKnown RBP4.44□□□□□ -1.7
LMNB1-208ENST00000504788 FXYD6P3P58550 94 aa4.44□□□□□ -1.7
LMNB1-208ENST00000504788 RAC1P63000 192 aa4.44□□□□□ -1.7
LMNB1-208ENST00000504788 ALDH6A1Q02252 535 aaKnown RBP4.44□□□□□ -1.7
LMNB1-208ENST00000504788 FLOT2Q14254 428 aa4.44□□□□□ -1.7
LMNB1-208ENST00000504788 KPNB1Q14974 876 aaKnown RBP4.44□□□□□ -1.7
LMNB1-208ENST00000504788 SEC23BQ15437 767 aa4.44□□□□□ -1.7
LMNB1-208ENST00000504788 IFI44LQ53G44 452 aa4.44□□□□□ -1.7
LMNB1-208ENST00000504788 KRTCAP3Q53RY4 240 aa4.44□□□□□ -1.7
LMNB1-208ENST00000504788 HMBOX1Q6NT76 420 aa4.44□□□□□ -1.7
LMNB1-208ENST00000504788 FAM180AQ6UWF9 173 aa4.44□□□□□ -1.7
LMNB1-208ENST00000504788 PLXDC2Q6UX71 529 aa4.44□□□□□ -1.7
LMNB1-208ENST00000504788 TMEM179BQ7Z7N9 219 aa4.44□□□□□ -1.7
LMNB1-208ENST00000504788 DOLPP1Q86YN1 238 aa4.44□□□□□ -1.7
LMNB1-208ENST00000504788 FAM98AQ8NCA5 519 aaKnown RBP4.44□□□□□ -1.7
LMNB1-208ENST00000504788 OR4K17Q8NGC6 315 aa4.44□□□□□ -1.7
LMNB1-208ENST00000504788 VANGL1Q8TAA9 524 aaPredicted RBP4.44□□□□□ -1.7
LMNB1-208ENST00000504788 LIPHQ8WWY8 451 aa4.44□□□□□ -1.7
LMNB1-208ENST00000504788 GEMIN6Q8WXD5 167 aaKnown RBP4.44□□□□□ -1.7
LMNB1-208ENST00000504788 SLC41A3Q96GZ6 507 aa4.44□□□□□ -1.7
LMNB1-208ENST00000504788 TPD52L3Q96J77 140 aa4.44□□□□□ -1.7
LMNB1-208ENST00000504788 JSRP1Q96MG2 331 aaPredicted RBP4.44□□□□□ -1.7
LMNB1-208ENST00000504788 DMRTA2Q96SC8 542 aa4.44□□□□□ -1.7
LMNB1-208ENST00000504788 GPA33Q99795 319 aa4.44□□□□□ -1.7
LMNB1-208ENST00000504788 ZNF559Q9BR84 538 aa4.44□□□□□ -1.7
LMNB1-208ENST00000504788 TMEM43Q9BTV4 400 aa4.44□□□□□ -1.7
LMNB1-208ENST00000504788 TRIM2Q9C040 744 aa4.44□□□□□ -1.7
LMNB1-208ENST00000504788 OR11A1Q9GZK7 315 aa4.44□□□□□ -1.7
LMNB1-208ENST00000504788 POLR2J2Q9GZM3 115 aaKnown RBP4.44□□□□□ -1.7
LMNB1-208ENST00000504788 POLR2J3Q9H1A7 115 aaKnown RBP4.44□□□□□ -1.7
LMNB1-208ENST00000504788 PTGES2Q9H7Z7 377 aa4.44□□□□□ -1.7
LMNB1-208ENST00000504788 NMNAT1Q9HAN9 279 aaPredicted RBP4.44□□□□□ -1.7
LMNB1-208ENST00000504788 HHATLQ9HCP6 504 aa4.44□□□□□ -1.7
LMNB1-208ENST00000504788 FANCFQ9NPI8 374 aa4.44□□□□□ -1.7
LMNB1-208ENST00000504788 PNPLA3Q9NST1 481 aa4.44□□□□□ -1.7
LMNB1-208ENST00000504788 C20orf141Q9NUB4 165 aa4.44□□□□□ -1.7
LMNB1-208ENST00000504788 ARMC1Q9NVT9 282 aa4.44□□□□□ -1.7
LMNB1-208ENST00000504788 ADPRHL2Q9NX46 363 aa4.44□□□□□ -1.7
LMNB1-208ENST00000504788 CLCF1Q9UBD9 225 aa4.44□□□□□ -1.7
LMNB1-208ENST00000504788 CHRNA9Q9UGM1 479 aa4.44□□□□□ -1.7
LMNB1-208ENST00000504788 RPS6KA6Q9UK32 745 aa4.44□□□□□ -1.7
LMNB1-208ENST00000504788 RPH3AQ9Y2J0 694 aaPredicted RBP4.44□□□□□ -1.7
LMNB1-208ENST00000504788 LYVE1Q9Y5Y7 322 aa4.44□□□□□ -1.7
LMNB1-208ENST00000504788 HCFC1P51610 2035 aa4.43□□□□□ -1.7
LMNB1-208ENST00000504788 DCHS2Q6V1P9 2916 aa4.43□□□□□ -1.7
LMNB1-208ENST00000504788 CSMD2Q7Z408 3487 aa4.43□□□□□ -1.7
LMNB1-208ENST00000504788 CACNA1CQ13936 2221 aa4.43□□□□□ -1.7
LMNB1-208ENST00000504788 DIDO1Q9BTC0 2240 aaKnown RBP4.43□□□□□ -1.7
LMNB1-208ENST00000504788 LRRK2Q5S007 2527 aa4.43□□□□□ -1.7
LMNB1-208ENST00000504788 TMED7-TICAM2A0A0A6YYA0 188 aa4.43□□□□□ -1.7
LMNB1-208ENST00000504788 TRBV4-1A0A0J9YWV2 114 aa4.43□□□□□ -1.7
LMNB1-208ENST00000504788 A0A1W2PRQ8 180 aa4.43□□□□□ -1.7
LMNB1-208ENST00000504788 DHRS12A0PJE2 317 aa4.43□□□□□ -1.7
LMNB1-208ENST00000504788 TRAPPC13A5PLN9 417 aa4.43□□□□□ -1.7
LMNB1-208ENST00000504788 CPSF4LA6NMK7 179 aaKnown RBP4.43□□□□□ -1.7
LMNB1-208ENST00000504788 LRRN3E7EW58 273 aa4.43□□□□□ -1.7
LMNB1-208ENST00000504788 LINC01387J3KSC0 135 aa4.43□□□□□ -1.7
LMNB1-208ENST00000504788 hCG_2039718K7EN88 272 aa4.43□□□□□ -1.7
LMNB1-208ENST00000504788 ACOT7O00154 380 aa4.43□□□□□ -1.7
LMNB1-208ENST00000504788 GTPBP1O00178 669 aaKnown RBP4.43□□□□□ -1.7
LMNB1-208ENST00000504788 RAMP1O60894 148 aa4.43□□□□□ -1.7
LMNB1-208ENST00000504788 CYP7B1O75881 506 aa4.43□□□□□ -1.7
LMNB1-208ENST00000504788 OR5F1O95221 314 aa4.43□□□□□ -1.7
LMNB1-208ENST00000504788 IFNA14P01570 189 aa4.43□□□□□ -1.7
LMNB1-208ENST00000504788 MT-ND1P03886 318 aa4.43□□□□□ -1.7
LMNB1-208ENST00000504788 TP53P04637 393 aaPredicted RBP4.43□□□□□ -1.7
LMNB1-208ENST00000504788 IFNW1P05000 195 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms